RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 ABI1Q8IZP0 508 aa13.89□□□□□ -0.19
PPP4R3B-206ENST00000616407 EMC1Q8N766 993 aa13.89□□□□□ -0.19
PPP4R3B-206ENST00000616407 C7orf43Q8WVR3 580 aa13.89□□□□□ -0.19
PPP4R3B-206ENST00000616407 BSNDQ8WZ55 320 aa13.89□□□□□ -0.19
PPP4R3B-206ENST00000616407 PRMT1Q99873 361 aaKnown RBP13.89□□□□□ -0.19
PPP4R3B-206ENST00000616407 DPP3Q9NY33 737 aa13.89□□□□□ -0.19
PPP4R3B-206ENST00000616407 MAGEA4P43358 317 aa13.89□□□□□ -0.19
PPP4R3B-206ENST00000616407 MARCKSL1P49006 195 aa13.89□□□□□ -0.19
PPP4R3B-206ENST00000616407 FMO1Q01740 532 aa13.89□□□□□ -0.19
PPP4R3B-206ENST00000616407 MAP1SQ66K74 1059 aaPredicted RBP13.89□□□□□ -0.19
PPP4R3B-206ENST00000616407 SPATA18Q8TC71 538 aa13.89□□□□□ -0.19
PPP4R3B-206ENST00000616407 TTC17Q96AE7 1141 aa13.89□□□□□ -0.19
PPP4R3B-206ENST00000616407 GMLQ99445 158 aa13.89□□□□□ -0.19
PPP4R3B-206ENST00000616407 SEMA4AQ9H3S1 761 aa13.89□□□□□ -0.19
PPP4R3B-206ENST00000616407 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.89□□□□□ -0.19
PPP4R3B-206ENST00000616407 ZNF862O60290 1169 aa13.89□□□□□ -0.19
PPP4R3B-206ENST00000616407 CTSHP09668 335 aa13.89□□□□□ -0.19
PPP4R3B-206ENST00000616407 CDH8P55286 799 aa13.89□□□□□ -0.19
PPP4R3B-206ENST00000616407 STILQ15468 1287 aa13.89□□□□□ -0.19
PPP4R3B-206ENST00000616407 C12orf56Q8IXR9 622 aa13.89□□□□□ -0.19
PPP4R3B-206ENST00000616407 DAW1Q8N136 415 aa13.89□□□□□ -0.19
PPP4R3B-206ENST00000616407 CDCA5Q96FF9 252 aa13.89□□□□□ -0.19
PPP4R3B-206ENST00000616407 TNIP3Q96KP6 325 aa13.89□□□□□ -0.19
PPP4R3B-206ENST00000616407 TACO1Q9BSH4 297 aaKnown RBP13.89□□□□□ -0.19
PPP4R3B-206ENST00000616407 ACTR5Q9H9F9 607 aaPredicted RBP13.89□□□□□ -0.19
PPP4R3B-206ENST00000616407 TMBIM4Q9HC24 238 aa13.89□□□□□ -0.19
PPP4R3B-206ENST00000616407 KLK14Q9P0G3 267 aa13.89□□□□□ -0.19
PPP4R3B-206ENST00000616407 STAP1Q9ULZ2 295 aa13.89□□□□□ -0.19
PPP4R3B-206ENST00000616407 NFKBIEO00221 500 aa13.88□□□□□ -0.19
PPP4R3B-206ENST00000616407 ACKR2O00590 384 aa13.88□□□□□ -0.19
PPP4R3B-206ENST00000616407 KRT37O76014 449 aa13.88□□□□□ -0.19
PPP4R3B-206ENST00000616407 CELF2O95319 508 aaKnown RBP13.88□□□□□ -0.19
PPP4R3B-206ENST00000616407 ARPP19P56211 112 aa13.88□□□□□ -0.19
PPP4R3B-206ENST00000616407 NFIL3Q16649 462 aa13.88□□□□□ -0.19
PPP4R3B-206ENST00000616407 AMHR2Q16671 573 aa13.88□□□□□ -0.19
PPP4R3B-206ENST00000616407 ARL13BQ3SXY8 428 aa13.88□□□□□ -0.19
PPP4R3B-206ENST00000616407 HEATR6Q6AI08 1181 aaKnown RBP13.88□□□□□ -0.19
PPP4R3B-206ENST00000616407 ABHD15Q6UXT9 468 aa13.88□□□□□ -0.19
PPP4R3B-206ENST00000616407 GABPB2Q8TAK5 448 aaPredicted RBP13.88□□□□□ -0.19
PPP4R3B-206ENST00000616407 CLMNQ96JQ2 1002 aa13.88□□□□□ -0.19
PPP4R3B-206ENST00000616407 KREMEN1Q96MU8 473 aa13.88□□□□□ -0.19
PPP4R3B-206ENST00000616407 XPO6Q96QU8 1125 aaKnown RBP13.88□□□□□ -0.19
PPP4R3B-206ENST00000616407 TAF1P21675 1872 aa13.88□□□□□ -0.19
PPP4R3B-206ENST00000616407 ZNF541Q9H0D2 1346 aa13.88□□□□□ -0.19
PPP4R3B-206ENST00000616407 KCNN4O15554 427 aa13.88□□□□□ -0.19
PPP4R3B-206ENST00000616407 CAND2O75155 1236 aa13.88□□□□□ -0.19
PPP4R3B-206ENST00000616407 AARSP49588 968 aaKnown RBP eCLIP13.88□□□□□ -0.19
PPP4R3B-206ENST00000616407 CDC42EP1Q00587 391 aa13.88□□□□□ -0.19
PPP4R3B-206ENST00000616407 TRADDQ15628 312 aa13.88□□□□□ -0.19
PPP4R3B-206ENST00000616407 KLHL38Q2WGJ6 581 aa13.88□□□□□ -0.19
PPP4R3B-206ENST00000616407 KDM7AQ6ZMT4 941 aa13.88□□□□□ -0.19
PPP4R3B-206ENST00000616407 PALB2Q86YC2 1186 aa13.88□□□□□ -0.19
PPP4R3B-206ENST00000616407 PPP4R1Q8TF05 950 aa13.88□□□□□ -0.19
PPP4R3B-206ENST00000616407 TGS1Q96RS0 853 aaKnown RBP13.88□□□□□ -0.19
PPP4R3B-206ENST00000616407 MYH6P13533 1939 aa13.88□□□□□ -0.19
PPP4R3B-206ENST00000616407 TRIM66O15016 1216 aa13.88□□□□□ -0.19
PPP4R3B-206ENST00000616407 RARGP13631 454 aa13.88□□□□□ -0.19
PPP4R3B-206ENST00000616407 HUNKP57058 714 aa13.88□□□□□ -0.19
PPP4R3B-206ENST00000616407 C1QBPQ07021 282 aaKnown RBP13.88□□□□□ -0.19
PPP4R3B-206ENST00000616407 CAPSQ13938 189 aa13.88□□□□□ -0.19
PPP4R3B-206ENST00000616407 GEN1Q17RS7 908 aa13.88□□□□□ -0.19
PPP4R3B-206ENST00000616407 APPL2Q8NEU8 664 aa13.88□□□□□ -0.19
PPP4R3B-206ENST00000616407 EPS8L3Q8TE67 593 aaKnown RBP13.88□□□□□ -0.19
PPP4R3B-206ENST00000616407 WNK4Q96J92 1243 aa13.88□□□□□ -0.19
PPP4R3B-206ENST00000616407 RAB6BQ9NRW1 208 aa13.88□□□□□ -0.19
PPP4R3B-206ENST00000616407 DMAC2Q9NW81 257 aa13.88□□□□□ -0.19
PPP4R3B-206ENST00000616407 APOL1O14791 398 aa13.87□□□□□ -0.19
PPP4R3B-206ENST00000616407 CIB2O75838 187 aa13.87□□□□□ -0.19
PPP4R3B-206ENST00000616407 KCNA2P16389 499 aa13.87□□□□□ -0.19
PPP4R3B-206ENST00000616407 GTF2A2P52657 109 aa13.87□□□□□ -0.19
PPP4R3B-206ENST00000616407 ZNF280AP59817 542 aaPredicted RBP13.87□□□□□ -0.19
PPP4R3B-206ENST00000616407 PRPSAP1Q14558 356 aa13.87□□□□□ -0.19
PPP4R3B-206ENST00000616407 ZACNQ401N2 412 aa13.87□□□□□ -0.19
PPP4R3B-206ENST00000616407 TDRD10Q5VZ19 366 aaKnown RBP13.87□□□□□ -0.19
PPP4R3B-206ENST00000616407 RWDD4Q6NW29 188 aaKnown RBP13.87□□□□□ -0.19
PPP4R3B-206ENST00000616407 TBC1D1Q86TI0 1168 aaPredicted RBP13.87□□□□□ -0.19
PPP4R3B-206ENST00000616407 ZSWIM2Q8NEG5 633 aa13.87□□□□□ -0.19
PPP4R3B-206ENST00000616407 OR5B17Q8NGF7 314 aa13.87□□□□□ -0.19
PPP4R3B-206ENST00000616407 HES6Q96HZ4 224 aa13.87□□□□□ -0.19
PPP4R3B-206ENST00000616407 KLHL8Q9P2G9 620 aaPredicted RBP13.87□□□□□ -0.19
PPP4R3B-206ENST00000616407 RRN3P2A6NIE6 340 aa13.87□□□□□ -0.19
PPP4R3B-206ENST00000616407 TCP11X1B4DZS4 312 aa13.87□□□□□ -0.19
PPP4R3B-206ENST00000616407 GPD1P21695 349 aa13.87□□□□□ -0.19
PPP4R3B-206ENST00000616407 GARSP41250 739 aaKnown RBP13.87□□□□□ -0.19
PPP4R3B-206ENST00000616407 ZNF157P51786 506 aaPredicted RBP13.87□□□□□ -0.19
PPP4R3B-206ENST00000616407 PTGISQ16647 500 aa13.87□□□□□ -0.19
PPP4R3B-206ENST00000616407 GOLGA7BQ2TAP0 167 aa13.87□□□□□ -0.19
PPP4R3B-206ENST00000616407 DEPDC1BQ8WUY9 529 aa13.87□□□□□ -0.19
PPP4R3B-206ENST00000616407 PDHXO00330 501 aa13.87□□□□□ -0.19
PPP4R3B-206ENST00000616407 ZBTB22O15209 634 aa13.87□□□□□ -0.19
PPP4R3B-206ENST00000616407 SYF2O95926 243 aaKnown RBP13.87□□□□□ -0.19
PPP4R3B-206ENST00000616407 APRTP07741 180 aa13.87□□□□□ -0.19
PPP4R3B-206ENST00000616407 RPL21P46778 160 aaKnown RBP13.87□□□□□ -0.19
PPP4R3B-206ENST00000616407 SMAD1Q15797 465 aaKnown RBP13.87□□□□□ -0.19
PPP4R3B-206ENST00000616407 ACOT1Q86TX2 421 aa13.87□□□□□ -0.19
PPP4R3B-206ENST00000616407 ALG3Q92685 438 aa13.87□□□□□ -0.19
PPP4R3B-206ENST00000616407 TBC1D31Q96DN5 1066 aa13.87□□□□□ -0.19
PPP4R3B-206ENST00000616407 ZNF518BQ9C0D4 1074 aa13.87□□□□□ -0.19
PPP4R3B-206ENST00000616407 GOLGA8RI6L899 631 aa13.87□□□□□ -0.19
PPP4R3B-206ENST00000616407 FANCGO15287 622 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms