RNA–Protein interactions for RNA: ENST00000615653.1

HMGB1P24-202, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 685 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-202ENST00000615653 ANXA11P50995 505 aaKnown RBP3.32□□□□□ -1.88
HMGB1P24-202ENST00000615653 RPS7P62081 194 aaKnown RBP3.32□□□□□ -1.88
HMGB1P24-202ENST00000615653 POU6F2P78424 691 aaPredicted RBP3.32□□□□□ -1.88
HMGB1P24-202ENST00000615653 MRPS35P82673 323 aaKnown RBP3.32□□□□□ -1.88
HMGB1P24-202ENST00000615653 IL10RAQ13651 578 aa3.32□□□□□ -1.88
HMGB1P24-202ENST00000615653 FAM50AQ14320 339 aaKnown RBP3.32□□□□□ -1.88
HMGB1P24-202ENST00000615653 RALBP1Q15311 655 aa3.32□□□□□ -1.88
HMGB1P24-202ENST00000615653 PTPROQ16827 1216 aa3.32□□□□□ -1.88
HMGB1P24-202ENST00000615653 GEN1Q17RS7 908 aa3.32□□□□□ -1.88
HMGB1P24-202ENST00000615653 NBPF8Q3BBV2 869 aa3.32□□□□□ -1.88
HMGB1P24-202ENST00000615653 KRTAP27-1Q3LI81 207 aa3.32□□□□□ -1.88
HMGB1P24-202ENST00000615653 KIAA1614Q5VZ46 1190 aa3.32□□□□□ -1.88
HMGB1P24-202ENST00000615653 ACTRT2Q8TDY3 377 aa3.32□□□□□ -1.88
HMGB1P24-202ENST00000615653 SSH3Q8TE77 659 aa3.32□□□□□ -1.88
HMGB1P24-202ENST00000615653 NACC2Q96BF6 587 aa3.32□□□□□ -1.88
HMGB1P24-202ENST00000615653 CLPTM1LQ96KA5 538 aa3.32□□□□□ -1.88
HMGB1P24-202ENST00000615653 HEPHQ9BQS7 1158 aa3.32□□□□□ -1.88
HMGB1P24-202ENST00000615653 AIFM2Q9BRQ8 373 aa3.32□□□□□ -1.88
HMGB1P24-202ENST00000615653 UBA5Q9GZZ9 404 aa3.32□□□□□ -1.88
HMGB1P24-202ENST00000615653 SIK2Q9H0K1 926 aa3.32□□□□□ -1.88
HMGB1P24-202ENST00000615653 CCDC8Q9H0W5 538 aaPredicted RBP3.32□□□□□ -1.88
HMGB1P24-202ENST00000615653 CFAP97Q9P2B7 532 aa3.32□□□□□ -1.88
HMGB1P24-202ENST00000615653 LIMCH1Q9UPQ0 1083 aa3.32□□□□□ -1.88
HMGB1P24-202ENST00000615653 CDYLQ9Y232 598 aa3.32□□□□□ -1.88
HMGB1P24-202ENST00000615653 WASHC2CQ9Y4E1 1318 aa3.32□□□□□ -1.88
HMGB1P24-202ENST00000615653 CACNA1IQ9P0X4 2223 aa3.31□□□□□ -1.88
HMGB1P24-202ENST00000615653 TNKSO95271 1327 aa3.31□□□□□ -1.88
HMGB1P24-202ENST00000615653 A0A0U1RQG5 324 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P24-202ENST00000615653 KRTAP9-6A8MVA2 160 aa3.31□□□□□ -1.88
HMGB1P24-202ENST00000615653 PROM1O43490 865 aa3.31□□□□□ -1.88
HMGB1P24-202ENST00000615653 PEX1O43933 1283 aa3.31□□□□□ -1.88
HMGB1P24-202ENST00000615653 SOAT2O75908 522 aa3.31□□□□□ -1.88
HMGB1P24-202ENST00000615653 SNUPNO95149 360 aaKnown RBP3.31□□□□□ -1.88
HMGB1P24-202ENST00000615653 GNAI3P08754 354 aa3.31□□□□□ -1.88
HMGB1P24-202ENST00000615653 TKTP29401 623 aaKnown RBP3.31□□□□□ -1.88
HMGB1P24-202ENST00000615653 RARRES1P49788 294 aa3.31□□□□□ -1.88
HMGB1P24-202ENST00000615653 ZNF280AP59817 542 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P24-202ENST00000615653 KRTAP10-5P60370 271 aa3.31□□□□□ -1.88
HMGB1P24-202ENST00000615653 GNAI1P63096 354 aa3.31□□□□□ -1.88
HMGB1P24-202ENST00000615653 SIM1P81133 766 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P24-202ENST00000615653 HLXQ14774 488 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P24-202ENST00000615653 ZNF169Q14929 603 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P24-202ENST00000615653 UTP14CQ5TAP6 766 aaKnown RBP3.31□□□□□ -1.88
HMGB1P24-202ENST00000615653 KIAA0895LQ68EN5 471 aa3.31□□□□□ -1.88
HMGB1P24-202ENST00000615653 C11orf87Q6NUJ2 197 aa3.31□□□□□ -1.88
HMGB1P24-202ENST00000615653 SLC4A10Q6U841 1118 aa3.31□□□□□ -1.88
HMGB1P24-202ENST00000615653 Q8NA96 180 aa3.31□□□□□ -1.88
HMGB1P24-202ENST00000615653 KAT5Q92993 513 aa3.31□□□□□ -1.88
HMGB1P24-202ENST00000615653 SCAMP4Q969E2 229 aa3.31□□□□□ -1.88
HMGB1P24-202ENST00000615653 RAB24Q969Q5 203 aa3.31□□□□□ -1.88
HMGB1P24-202ENST00000615653 CHMP4CQ96CF2 233 aa3.31□□□□□ -1.88
HMGB1P24-202ENST00000615653 PTCD3Q96EY7 689 aaKnown RBP3.31□□□□□ -1.88
HMGB1P24-202ENST00000615653 FAM167AQ96KS9 214 aa3.31□□□□□ -1.88
HMGB1P24-202ENST00000615653 KLHL32Q96NJ5 620 aa3.31□□□□□ -1.88
HMGB1P24-202ENST00000615653 NAP1L5Q96NT1 182 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P24-202ENST00000615653 WDCPQ9H6R7 721 aa3.31□□□□□ -1.88
HMGB1P24-202ENST00000615653 PCDHB1Q9Y5F3 818 aa3.31□□□□□ -1.88
HMGB1P24-202ENST00000615653 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.31□□□□□ -1.88
HMGB1P24-202ENST00000615653 WIPF3A6NGB9 483 aa3.3□□□□□ -1.88
HMGB1P24-202ENST00000615653 ZRANB2O95218 330 aaKnown RBP eCLIP3.3□□□□□ -1.88
HMGB1P24-202ENST00000615653 CELA2AP08217 269 aa3.3□□□□□ -1.88
HMGB1P24-202ENST00000615653 SBK3P0C264 359 aa3.3□□□□□ -1.88
HMGB1P24-202ENST00000615653 MALP21145 153 aa3.3□□□□□ -1.88
HMGB1P24-202ENST00000615653 FOLR3P41439 243 aa3.3□□□□□ -1.88
HMGB1P24-202ENST00000615653 CACNA2D1P54289 1103 aa3.3□□□□□ -1.88
HMGB1P24-202ENST00000615653 DYRK1AQ13627 763 aa3.3□□□□□ -1.88
HMGB1P24-202ENST00000615653 PREPLQ4J6C6 727 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P24-202ENST00000615653 CCDC93Q567U6 631 aa3.3□□□□□ -1.88
HMGB1P24-202ENST00000615653 VWA1Q6PCB0 445 aa3.3□□□□□ -1.88
HMGB1P24-202ENST00000615653 DLK2Q6UY11 383 aa3.3□□□□□ -1.88
HMGB1P24-202ENST00000615653 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P24-202ENST00000615653 ZNF788Q6ZQV5 615 aa3.3□□□□□ -1.88
HMGB1P24-202ENST00000615653 ZBTB46Q86UZ6 589 aa3.3□□□□□ -1.88
HMGB1P24-202ENST00000615653 SMC5Q8IY18 1101 aa3.3□□□□□ -1.88
HMGB1P24-202ENST00000615653 C3orf20Q8ND61 904 aa3.3□□□□□ -1.88
HMGB1P24-202ENST00000615653 SNX19Q92543 992 aa3.3□□□□□ -1.88
HMGB1P24-202ENST00000615653 DDX17Q92841 729 aaKnown RBP3.3□□□□□ -1.88
HMGB1P24-202ENST00000615653 TMEM125Q96AQ2 219 aa3.3□□□□□ -1.88
HMGB1P24-202ENST00000615653 PDLIM2Q96JY6 352 aa3.3□□□□□ -1.88
HMGB1P24-202ENST00000615653 PPP1R10Q96QC0 940 aaKnown RBP3.3□□□□□ -1.88
HMGB1P24-202ENST00000615653 DMRTA2Q96SC8 542 aa3.3□□□□□ -1.88
HMGB1P24-202ENST00000615653 NUP88Q99567 741 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P24-202ENST00000615653 SMAD5Q99717 465 aaKnown RBP3.3□□□□□ -1.88
HMGB1P24-202ENST00000615653 SMOQ99835 787 aa3.3□□□□□ -1.88
HMGB1P24-202ENST00000615653 TLR10Q9BXR5 811 aa3.3□□□□□ -1.88
HMGB1P24-202ENST00000615653 TYW1Q9NV66 732 aaKnown RBP3.3□□□□□ -1.88
HMGB1P24-202ENST00000615653 FOXJ2Q9P0K8 574 aa3.3□□□□□ -1.88
HMGB1P24-202ENST00000615653 CTTNBP2NLQ9P2B4 639 aa3.3□□□□□ -1.88
HMGB1P24-202ENST00000615653 KLHL42Q9P2K6 505 aa3.3□□□□□ -1.88
HMGB1P24-202ENST00000615653 SLC17A6Q9P2U8 582 aa3.3□□□□□ -1.88
HMGB1P24-202ENST00000615653 FEZ2Q9UHY8 353 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P24-202ENST00000615653 SERPINB13Q9UIV8 391 aa3.3□□□□□ -1.88
HMGB1P24-202ENST00000615653 NOP58Q9Y2X3 529 aaKnown RBP3.3□□□□□ -1.88
HMGB1P24-202ENST00000615653 SPATA31A3Q5VYP0 1347 aa3.29□□□□□ -1.88
HMGB1P24-202ENST00000615653 CCDC194A0A1B0GVG4 234 aa3.29□□□□□ -1.88
HMGB1P24-202ENST00000615653 NT5C1B-RDH14C9J2C7 533 aa3.29□□□□□ -1.88
HMGB1P24-202ENST00000615653 H3BNC9 293 aa3.29□□□□□ -1.88
HMGB1P24-202ENST00000615653 F2RL2O00254 374 aa3.29□□□□□ -1.88
HMGB1P24-202ENST00000615653 TOR1BO14657 336 aa3.29□□□□□ -1.88
HMGB1P24-202ENST00000615653 MPPED1O15442 326 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms