RNA–Protein interactions for RNA: ENST00000613899.4

FAM228B-208, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM228B, Length 1,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-208ENST00000613899 SLC27A5Q9Y2P5 690 aa24.51■■□□□ 1.51
FAM228B-208ENST00000613899 PROB1E7EW31 1015 aa24.5■■□□□ 1.51
FAM228B-208ENST00000613899 POLR2DO15514 142 aaKnown RBP24.5■■□□□ 1.51
FAM228B-208ENST00000613899 MOSPD3O75425 235 aa24.5■■□□□ 1.51
FAM228B-208ENST00000613899 ITGB3P05106 788 aa24.5■■□□□ 1.51
FAM228B-208ENST00000613899 NBL1P41271 181 aa24.5■■□□□ 1.51
FAM228B-208ENST00000613899 TUFMP49411 452 aaKnown RBP24.5■■□□□ 1.51
FAM228B-208ENST00000613899 FAM26FQ5R3K3 315 aa24.5■■□□□ 1.51
FAM228B-208ENST00000613899 TMC8Q8IU68 726 aa24.5■■□□□ 1.51
FAM228B-208ENST00000613899 TTC9BQ8N6N2 239 aa24.5■■□□□ 1.51
FAM228B-208ENST00000613899 LRRC52Q8N7C0 313 aa24.5■■□□□ 1.51
FAM228B-208ENST00000613899 C1orf127Q8N9H9 656 aa24.5■■□□□ 1.51
FAM228B-208ENST00000613899 GLIS3Q8NEA6 775 aa24.5■■□□□ 1.51
FAM228B-208ENST00000613899 SHKBP1Q8TBC3 707 aa24.5■■□□□ 1.51
FAM228B-208ENST00000613899 DNASE1L2Q92874 299 aa24.5■■□□□ 1.51
FAM228B-208ENST00000613899 SMARCD2Q92925 531 aa24.5■■□□□ 1.51
FAM228B-208ENST00000613899 HPS3Q969F9 1004 aa24.5■■□□□ 1.51
FAM228B-208ENST00000613899 PSMG2Q969U7 264 aa24.5■■□□□ 1.51
FAM228B-208ENST00000613899 BORCS6Q96GS4 357 aa24.5■■□□□ 1.51
FAM228B-208ENST00000613899 C7orf25Q9BPX7 421 aa24.5■■□□□ 1.51
FAM228B-208ENST00000613899 DDX23Q9BUQ8 820 aaKnown RBP24.5■■□□□ 1.51
FAM228B-208ENST00000613899 PLA2G2FQ9BZM2 168 aa24.5■■□□□ 1.51
FAM228B-208ENST00000613899 SLITRK6Q9H5Y7 841 aa24.5■■□□□ 1.51
FAM228B-208ENST00000613899 PCDHA7Q9UN72 937 aa24.5■■□□□ 1.51
FAM228B-208ENST00000613899 AGAP1Q9UPQ3 857 aa24.5■■□□□ 1.51
FAM228B-208ENST00000613899 UBE4BO95155 1302 aa24.5■■□□□ 1.51
FAM228B-208ENST00000613899 KANSL1LA0AUZ9 987 aa24.49■■□□□ 1.51
FAM228B-208ENST00000613899 NRG2O14511 850 aaPredicted RBP24.49■■□□□ 1.51
FAM228B-208ENST00000613899 FGF19O95750 216 aa24.49■■□□□ 1.51
FAM228B-208ENST00000613899 DCNP07585 359 aaKnown RBP24.49■■□□□ 1.51
FAM228B-208ENST00000613899 TMEM191BP0C7N4 346 aa24.49■■□□□ 1.51
FAM228B-208ENST00000613899 PKP1Q13835 747 aa24.49■■□□□ 1.51
FAM228B-208ENST00000613899 VEPH1Q14D04 833 aa24.49■■□□□ 1.51
FAM228B-208ENST00000613899 TEAD2Q15562 447 aa24.49■■□□□ 1.51
FAM228B-208ENST00000613899 UNC13DQ70J99 1090 aa24.49■■□□□ 1.51
FAM228B-208ENST00000613899 SPPL2BQ8TCT7 592 aa24.49■■□□□ 1.51
FAM228B-208ENST00000613899 SEPT5Q99719 369 aaPredicted RBP24.49■■□□□ 1.51
FAM228B-208ENST00000613899 LRRC3Q9BY71 257 aa24.49■■□□□ 1.51
FAM228B-208ENST00000613899 FOXQ1Q9C009 403 aa24.49■■□□□ 1.51
FAM228B-208ENST00000613899 PDE11AQ9HCR9 933 aa24.49■■□□□ 1.51
FAM228B-208ENST00000613899 GJA1P17302 382 aa24.48■■□□□ 1.51
FAM228B-208ENST00000613899 SURF1Q15526 300 aa24.48■■□□□ 1.51
FAM228B-208ENST00000613899 MGAT5BQ3V5L5 792 aa24.48■■□□□ 1.51
FAM228B-208ENST00000613899 RESP18Q5W5W9 173 aa24.48■■□□□ 1.51
FAM228B-208ENST00000613899 DCP1BQ8IZD4 617 aaKnown RBP24.48■■□□□ 1.51
FAM228B-208ENST00000613899 SPRYD3Q8NCJ5 442 aa24.48■■□□□ 1.51
FAM228B-208ENST00000613899 ZSCAN18Q8TBC5 510 aaPredicted RBP24.48■■□□□ 1.51
FAM228B-208ENST00000613899 DEPDC1BQ8WUY9 529 aa24.48■■□□□ 1.51
FAM228B-208ENST00000613899 ANKRD36BP1Q96IX9 119 aa24.48■■□□□ 1.51
FAM228B-208ENST00000613899 ZSWIM3Q96MP5 696 aa24.48■■□□□ 1.51
FAM228B-208ENST00000613899 TRMT61BQ9BVS5 477 aaKnown RBP24.48■■□□□ 1.51
FAM228B-208ENST00000613899 MTMR12Q9C0I1 747 aa24.48■■□□□ 1.51
FAM228B-208ENST00000613899 BRD9Q9H8M2 597 aa24.48■■□□□ 1.51
FAM228B-208ENST00000613899 TRPV4Q9HBA0 871 aa24.48■■□□□ 1.51
FAM228B-208ENST00000613899 KIAA1586Q9HCI6 787 aa24.48■■□□□ 1.51
FAM228B-208ENST00000613899 DLGAP2Q9P1A6 1054 aa24.48■■□□□ 1.51
FAM228B-208ENST00000613899 A0A1W2PRU2 124 aa24.47■■□□□ 1.51
FAM228B-208ENST00000613899 ZNF233A6NK53 670 aa24.47■■□□□ 1.51
FAM228B-208ENST00000613899 GFRA3O60609 400 aa24.47■■□□□ 1.51
FAM228B-208ENST00000613899 HUS1O60921 280 aa24.47■■□□□ 1.51
FAM228B-208ENST00000613899 KRT19P08727 400 aa24.47■■□□□ 1.51
FAM228B-208ENST00000613899 TSPY1Q01534 308 aa24.47■■□□□ 1.51
FAM228B-208ENST00000613899 DNM1Q05193 864 aaKnown RBP24.47■■□□□ 1.51
FAM228B-208ENST00000613899 EPM2AIP1Q7L775 607 aaPredicted RBP24.47■■□□□ 1.51
FAM228B-208ENST00000613899 DNAJB7Q7Z6W7 309 aaPredicted RBP24.47■■□□□ 1.51
FAM228B-208ENST00000613899 TMEM86AQ8N2M4 240 aa24.47■■□□□ 1.51
FAM228B-208ENST00000613899 CSGALNACT2Q8N6G5 542 aa24.47■■□□□ 1.51
FAM228B-208ENST00000613899 ZNF507Q8TCN5 953 aa24.47■■□□□ 1.51
FAM228B-208ENST00000613899 E2F7Q96AV8 911 aa24.47■■□□□ 1.51
FAM228B-208ENST00000613899 OSBPL6Q9BZF3 934 aa24.47■■□□□ 1.51
FAM228B-208ENST00000613899 HSPBP1Q9NZL4 362 aa24.47■■□□□ 1.51
FAM228B-208ENST00000613899 R3HCC1Q9Y3T6 440 aaKnown RBP24.47■■□□□ 1.51
FAM228B-208ENST00000613899 NUP210Q8TEM1 1887 aaPredicted RBP24.47■■□□□ 1.51
FAM228B-208ENST00000613899 COL4A3Q01955 1670 aa24.46■■□□□ 1.51
FAM228B-208ENST00000613899 SOAT2O75908 522 aa24.46■■□□□ 1.51
FAM228B-208ENST00000613899 PSMC3P17980 439 aa24.46■■□□□ 1.51
FAM228B-208ENST00000613899 RBP5P82980 135 aa24.46■■□□□ 1.51
FAM228B-208ENST00000613899 EHHADHQ08426 723 aa24.46■■□□□ 1.51
FAM228B-208ENST00000613899 BFSP1Q12934 665 aa24.46■■□□□ 1.51
FAM228B-208ENST00000613899 GRM2Q14416 872 aa24.46■■□□□ 1.51
FAM228B-208ENST00000613899 UBXN2BQ14CS0 331 aa24.46■■□□□ 1.51
FAM228B-208ENST00000613899 VITQ6UXI7 678 aa24.46■■□□□ 1.51
FAM228B-208ENST00000613899 TPRG1Q6ZUI0 275 aa24.46■■□□□ 1.51
FAM228B-208ENST00000613899 PDCL2Q8N4E4 241 aa24.46■■□□□ 1.51
FAM228B-208ENST00000613899 CXorf38Q8TB03 319 aa24.46■■□□□ 1.51
FAM228B-208ENST00000613899 SPATA18Q8TC71 538 aa24.46■■□□□ 1.51
FAM228B-208ENST00000613899 FAM200AQ8TCP9 573 aa24.46■■□□□ 1.51
FAM228B-208ENST00000613899 IRF7Q92985 503 aa24.46■■□□□ 1.51
FAM228B-208ENST00000613899 LTB4R2Q9NPC1 389 aa24.46■■□□□ 1.51
FAM228B-208ENST00000613899 GTF3C3Q9Y5Q9 886 aa24.46■■□□□ 1.51
FAM228B-208ENST00000613899 USP34Q70CQ2 3546 aa24.45■■□□□ 1.51
FAM228B-208ENST00000613899 HOXD13P35453 343 aa24.45■■□□□ 1.5
FAM228B-208ENST00000613899 MAGEA9P43362 315 aa24.45■■□□□ 1.5
FAM228B-208ENST00000613899 SNRPFP62306 86 aaKnown RBP24.45■■□□□ 1.5
FAM228B-208ENST00000613899 CBWD2Q8IUF1 395 aa24.45■■□□□ 1.5
FAM228B-208ENST00000613899 CEP57L1Q8IYX8 460 aa24.45■■□□□ 1.5
FAM228B-208ENST00000613899 LPIN3Q9BQK8 851 aa24.45■■□□□ 1.5
FAM228B-208ENST00000613899 BCO2Q9BYV7 579 aa24.45■■□□□ 1.5
FAM228B-208ENST00000613899 HEBP1Q9NRV9 189 aa24.45■■□□□ 1.5
FAM228B-208ENST00000613899 AGPAT3Q9NRZ7 376 aa24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms