RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 ARID3AQ99856 593 aa15.72■□□□□ 0.11
CD48-203ENST00000613788 SDCBP2Q9H190 292 aa15.72■□□□□ 0.11
CD48-203ENST00000613788 CISHQ9NSE2 258 aa15.72■□□□□ 0.11
CD48-203ENST00000613788 MTUS1Q9ULD2 1270 aa15.72■□□□□ 0.11
CD48-203ENST00000613788 BARX2Q9UMQ3 279 aaPredicted RBP15.72■□□□□ 0.11
CD48-203ENST00000613788 SSX2IPQ9Y2D8 614 aa15.72■□□□□ 0.11
CD48-203ENST00000613788 H7C4K7 107 aa15.71■□□□□ 0.11
CD48-203ENST00000613788 GABRDO14764 452 aa15.71■□□□□ 0.11
CD48-203ENST00000613788 OAZ2O95190 189 aa15.71■□□□□ 0.11
CD48-203ENST00000613788 CD58P19256 250 aa15.71■□□□□ 0.11
CD48-203ENST00000613788 RAP1GAPP47736 663 aa15.71■□□□□ 0.11
CD48-203ENST00000613788 DRAP1Q14919 205 aaPredicted RBP15.71■□□□□ 0.11
CD48-203ENST00000613788 ANKS3Q6ZW76 656 aa15.71■□□□□ 0.11
CD48-203ENST00000613788 TAS1R1Q7RTX1 841 aa15.71■□□□□ 0.11
CD48-203ENST00000613788 UNC93AQ86WB7 457 aa15.71■□□□□ 0.11
CD48-203ENST00000613788 FMNL3Q8IVF7 1028 aa15.71■□□□□ 0.11
CD48-203ENST00000613788 VPS52Q8N1B4 723 aa15.71■□□□□ 0.11
CD48-203ENST00000613788 CPLX3Q8WVH0 158 aa15.71■□□□□ 0.11
CD48-203ENST00000613788 MRPL45Q9BRJ2 306 aaKnown RBP15.71■□□□□ 0.11
CD48-203ENST00000613788 HERC2P3Q9BVR0 1158 aa15.71■□□□□ 0.11
CD48-203ENST00000613788 OXCT2Q9BYC2 517 aaPredicted RBP15.71■□□□□ 0.11
CD48-203ENST00000613788 TTYH3Q9C0H2 523 aa15.71■□□□□ 0.11
CD48-203ENST00000613788 CHST7Q9NS84 486 aa15.71■□□□□ 0.11
CD48-203ENST00000613788 MYO6Q9UM54 1294 aa15.71■□□□□ 0.11
CD48-203ENST00000613788 CAPN11Q9UMQ6 739 aa15.71■□□□□ 0.11
CD48-203ENST00000613788 LUC7L2Q9Y383 392 aaKnown RBP15.71■□□□□ 0.11
CD48-203ENST00000613788 PCDHB4Q9Y5E5 795 aa15.71■□□□□ 0.11
CD48-203ENST00000613788 H3BNC9 293 aa15.7■□□□□ 0.1
CD48-203ENST00000613788 INCA1Q0VD86 236 aa15.7■□□□□ 0.1
CD48-203ENST00000613788 VARS2Q5ST30 1063 aaKnown RBP15.7■□□□□ 0.1
CD48-203ENST00000613788 GPR65Q8IYL9 337 aa15.7■□□□□ 0.1
CD48-203ENST00000613788 SPPL3Q8TCT6 385 aa15.7■□□□□ 0.1
CD48-203ENST00000613788 KBTBD7Q8WVZ9 684 aa15.7■□□□□ 0.1
CD48-203ENST00000613788 SHC3Q92529 594 aa15.7■□□□□ 0.1
CD48-203ENST00000613788 VN1R3Q9BXE9 311 aa15.7■□□□□ 0.1
CD48-203ENST00000613788 NUCKS1Q9H1E3 243 aaKnown RBP15.7■□□□□ 0.1
CD48-203ENST00000613788 ALG13Q9NP73 1137 aaKnown RBP15.7■□□□□ 0.1
CD48-203ENST00000613788 DDX43Q9NXZ2 648 aaKnown RBP15.7■□□□□ 0.1
CD48-203ENST00000613788 STXBP5LQ9Y2K9 1186 aa15.7■□□□□ 0.1
CD48-203ENST00000613788 RANBP2P49792 3224 aaKnown RBP15.7■□□□□ 0.1
CD48-203ENST00000613788 LAMA2P24043 3122 aaKnown RBP15.7■□□□□ 0.1
CD48-203ENST00000613788 A8MXQ7 604 aa15.69■□□□□ 0.1
CD48-203ENST00000613788 GOLGA6L6A8MZA4 724 aa15.69■□□□□ 0.1
CD48-203ENST00000613788 FOXN3O00409 490 aaPredicted RBP15.69■□□□□ 0.1
CD48-203ENST00000613788 CILPO75339 1184 aa15.69■□□□□ 0.1
CD48-203ENST00000613788 GYPCP04921 128 aa15.69■□□□□ 0.1
CD48-203ENST00000613788 URODP06132 367 aa15.69■□□□□ 0.1
CD48-203ENST00000613788 KRT5P13647 590 aa15.69■□□□□ 0.1
CD48-203ENST00000613788 ACO1P21399 889 aaKnown RBP15.69■□□□□ 0.1
CD48-203ENST00000613788 PCSK1P29120 753 aa15.69■□□□□ 0.1
CD48-203ENST00000613788 USP8P40818 1118 aa15.69■□□□□ 0.1
CD48-203ENST00000613788 STAT1P42224 750 aa15.69■□□□□ 0.1
CD48-203ENST00000613788 GLUD2P49448 558 aa15.69■□□□□ 0.1
CD48-203ENST00000613788 NDST1P52848 882 aa15.69■□□□□ 0.1
CD48-203ENST00000613788 ZBED6P86452 979 aa15.69■□□□□ 0.1
CD48-203ENST00000613788 DSG1Q02413 1049 aa15.69■□□□□ 0.1
CD48-203ENST00000613788 GPM6BQ13491 265 aa15.69■□□□□ 0.1
CD48-203ENST00000613788 MRPL58Q14197 206 aaKnown RBP15.69■□□□□ 0.1
CD48-203ENST00000613788 RTP2Q5QGT7 225 aa15.69■□□□□ 0.1
CD48-203ENST00000613788 TMEM270Q6UE05 265 aa15.69■□□□□ 0.1
CD48-203ENST00000613788 UBR7Q8N806 425 aa15.69■□□□□ 0.1
CD48-203ENST00000613788 POF1BQ8WVV4 589 aa15.69■□□□□ 0.1
CD48-203ENST00000613788 RIN2Q8WYP3 895 aaPredicted RBP15.69■□□□□ 0.1
CD48-203ENST00000613788 PIK3R5Q8WYR1 880 aa15.69■□□□□ 0.1
CD48-203ENST00000613788 TNIP3Q96KP6 325 aa15.69■□□□□ 0.1
CD48-203ENST00000613788 ACBD6Q9BR61 282 aa15.69■□□□□ 0.1
CD48-203ENST00000613788 NT5C1AQ9BXI3 368 aa15.69■□□□□ 0.1
CD48-203ENST00000613788 MRPL17Q9NRX2 175 aaKnown RBP15.69■□□□□ 0.1
CD48-203ENST00000613788 IMPACTQ9P2X3 320 aa15.69■□□□□ 0.1
CD48-203ENST00000613788 AJAP1Q9UKB5 411 aaPredicted RBP15.69■□□□□ 0.1
CD48-203ENST00000613788 CNTN6Q9UQ52 1028 aa15.69■□□□□ 0.1
CD48-203ENST00000613788 F8VZ95 297 aa15.68■□□□□ 0.1
CD48-203ENST00000613788 CCDC172P0C7W6 258 aa15.68■□□□□ 0.1
CD48-203ENST00000613788 CTSAP10619 480 aa15.68■□□□□ 0.1
CD48-203ENST00000613788 CASP14P31944 242 aa15.68■□□□□ 0.1
CD48-203ENST00000613788 JAM2P57087 298 aa15.68■□□□□ 0.1
CD48-203ENST00000613788 TBX2Q13207 712 aaPredicted RBP15.68■□□□□ 0.1
CD48-203ENST00000613788 CTXN3Q4LDR2 81 aa15.68■□□□□ 0.1
CD48-203ENST00000613788 KIAA0319Q5VV43 1072 aa15.68■□□□□ 0.1
CD48-203ENST00000613788 ZNF280DQ6N043 979 aa15.68■□□□□ 0.1
CD48-203ENST00000613788 TMC7Q7Z402 723 aa15.68■□□□□ 0.1
CD48-203ENST00000613788 SPRED2Q7Z698 418 aa15.68■□□□□ 0.1
CD48-203ENST00000613788 OSTM1Q86WC4 334 aa15.68■□□□□ 0.1
CD48-203ENST00000613788 FAM71AQ8IYT1 594 aa15.68■□□□□ 0.1
CD48-203ENST00000613788 ARNTL2Q8WYA1 636 aa15.68■□□□□ 0.1
CD48-203ENST00000613788 BAP1Q92560 729 aa15.68■□□□□ 0.1
CD48-203ENST00000613788 B3GALT6Q96L58 329 aa15.68■□□□□ 0.1
CD48-203ENST00000613788 CERS4Q9HA82 394 aa15.68■□□□□ 0.1
CD48-203ENST00000613788 OR6C75A6NL08 312 aa15.68■□□□□ 0.1
CD48-203ENST00000613788 CXCL14O95715 111 aa15.68■□□□□ 0.1
CD48-203ENST00000613788 PDGFRBP09619 1106 aa15.68■□□□□ 0.1
CD48-203ENST00000613788 LMO2P25791 158 aa15.68■□□□□ 0.1
CD48-203ENST00000613788 KRT9P35527 623 aa15.68■□□□□ 0.1
CD48-203ENST00000613788 SOX5P35711 763 aa15.68■□□□□ 0.1
CD48-203ENST00000613788 FXR1P51114 621 aaKnown RBP eCLIP15.68■□□□□ 0.1
CD48-203ENST00000613788 BPIFB4P59827 614 aa15.68■□□□□ 0.1
CD48-203ENST00000613788 CREMQ03060 361 aa15.68■□□□□ 0.1
CD48-203ENST00000613788 PSMD5Q16401 504 aa15.68■□□□□ 0.1
CD48-203ENST00000613788 TSR1Q2NL82 804 aaKnown RBP15.68■□□□□ 0.1
CD48-203ENST00000613788 ZNF394Q53GI3 561 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms