RNA–Protein interactions for RNA: ENST00000613721.4

TUBD1-216, Transcript of tubulin delta 1, humanhuman

TSL 5 BASIC

Gene TUBD1, Length 2,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-216ENST00000613721 NIF3L1Q9GZT8 377 aa12.66□□□□□ -0.38
TUBD1-216ENST00000613721 DNAJC17Q9NVM6 304 aaKnown RBP12.66□□□□□ -0.38
TUBD1-216ENST00000613721 NEU2Q9Y3R4 380 aa12.66□□□□□ -0.38
TUBD1-216ENST00000613721 CXCL11O14625 94 aa12.66□□□□□ -0.38
TUBD1-216ENST00000613721 OGTO15294 1046 aa12.66□□□□□ -0.38
TUBD1-216ENST00000613721 MARK3P27448 753 aa12.66□□□□□ -0.38
TUBD1-216ENST00000613721 ATP5DP30049 168 aa12.66□□□□□ -0.38
TUBD1-216ENST00000613721 MYL6P60660 151 aa12.66□□□□□ -0.38
TUBD1-216ENST00000613721 RPL7AP62424 266 aaKnown RBP12.66□□□□□ -0.38
TUBD1-216ENST00000613721 CCDC38Q502W7 563 aa12.66□□□□□ -0.38
TUBD1-216ENST00000613721 GJC2Q5T442 439 aaPredicted RBP12.66□□□□□ -0.38
TUBD1-216ENST00000613721 IER5Q5VY09 327 aa12.66□□□□□ -0.38
TUBD1-216ENST00000613721 CDCA2Q69YH5 1023 aaPredicted RBP12.66□□□□□ -0.38
TUBD1-216ENST00000613721 ZBTB8OSQ8IWT0 167 aa12.66□□□□□ -0.38
TUBD1-216ENST00000613721 TCP11Q8WWU5 503 aa12.66□□□□□ -0.38
TUBD1-216ENST00000613721 FAM212AQ96EL1 285 aa12.66□□□□□ -0.38
TUBD1-216ENST00000613721 CCDC134Q9H6E4 229 aa12.66□□□□□ -0.38
TUBD1-216ENST00000613721 GOLGA6L7A0A1B0GV03 622 aa12.65□□□□□ -0.38
TUBD1-216ENST00000613721 TMEM191CA6NGB0 347 aa12.65□□□□□ -0.38
TUBD1-216ENST00000613721 GAS2O43903 313 aaKnown RBP12.65□□□□□ -0.38
TUBD1-216ENST00000613721 PRKCBP05771 671 aa12.65□□□□□ -0.38
TUBD1-216ENST00000613721 TMEM191BP0C7N4 346 aa12.65□□□□□ -0.38
TUBD1-216ENST00000613721 ACTN3Q08043 901 aaPredicted RBP12.65□□□□□ -0.38
TUBD1-216ENST00000613721 NFX1Q12986 1120 aaKnown RBP12.65□□□□□ -0.38
TUBD1-216ENST00000613721 MXD4Q14582 209 aaPredicted RBP12.65□□□□□ -0.38
TUBD1-216ENST00000613721 PLCB4Q15147 1175 aa12.65□□□□□ -0.38
TUBD1-216ENST00000613721 SURF1Q15526 300 aa12.65□□□□□ -0.38
TUBD1-216ENST00000613721 MAPK6Q16659 721 aa12.65□□□□□ -0.38
TUBD1-216ENST00000613721 KYNUQ16719 465 aa12.65□□□□□ -0.38
TUBD1-216ENST00000613721 ZFYVE27Q5T4F4 411 aa12.65□□□□□ -0.38
TUBD1-216ENST00000613721 IZUMO3Q5VZ72 239 aa12.65□□□□□ -0.38
TUBD1-216ENST00000613721 DNAJC24Q6P3W2 148 aa12.65□□□□□ -0.38
TUBD1-216ENST00000613721 ANKS1BQ7Z6G8 1248 aa12.65□□□□□ -0.38
TUBD1-216ENST00000613721 EXOC3L1Q86VI1 746 aa12.65□□□□□ -0.38
TUBD1-216ENST00000613721 CNPY4Q8N129 248 aa12.65□□□□□ -0.38
TUBD1-216ENST00000613721 ZC3H15Q8WU90 426 aaKnown RBP12.65□□□□□ -0.38
TUBD1-216ENST00000613721 SLC10A4Q96EP9 437 aa12.65□□□□□ -0.38
TUBD1-216ENST00000613721 MCEEQ96PE7 176 aa12.65□□□□□ -0.38
TUBD1-216ENST00000613721 ACO2Q99798 780 aaKnown RBP12.65□□□□□ -0.38
TUBD1-216ENST00000613721 PRMT1Q99873 361 aaKnown RBP12.65□□□□□ -0.38
TUBD1-216ENST00000613721 ACTR5Q9H9F9 607 aaPredicted RBP12.65□□□□□ -0.38
TUBD1-216ENST00000613721 PDGFCQ9NRA1 345 aa12.65□□□□□ -0.38
TUBD1-216ENST00000613721 CISHQ9NSE2 258 aa12.65□□□□□ -0.38
TUBD1-216ENST00000613721 KLHL11Q9NVR0 708 aa12.65□□□□□ -0.38
TUBD1-216ENST00000613721 NINJ2Q9NZG7 142 aa12.65□□□□□ -0.38
TUBD1-216ENST00000613721 ANK1P16157 1881 aa12.65□□□□□ -0.38
TUBD1-216ENST00000613721 KRT1P04264 644 aa12.64□□□□□ -0.39
TUBD1-216ENST00000613721 SRGAP2CP0DJJ0 459 aa12.64□□□□□ -0.39
TUBD1-216ENST00000613721 BRD2P25440 801 aaKnown RBP12.64□□□□□ -0.39
TUBD1-216ENST00000613721 LMNB2Q03252 620 aa12.64□□□□□ -0.39
TUBD1-216ENST00000613721 LAMTOR4Q0VGL1 99 aa12.64□□□□□ -0.39
TUBD1-216ENST00000613721 TRPC3Q13507 836 aa12.64□□□□□ -0.39
TUBD1-216ENST00000613721 CNGA2Q16280 664 aa12.64□□□□□ -0.39
TUBD1-216ENST00000613721 DUOXA2Q1HG44 320 aa12.64□□□□□ -0.39
TUBD1-216ENST00000613721 SGSM1Q2NKQ1 1148 aa12.64□□□□□ -0.39
TUBD1-216ENST00000613721 ZNF394Q53GI3 561 aa12.64□□□□□ -0.39
TUBD1-216ENST00000613721 LDLRAD1Q5T700 205 aa12.64□□□□□ -0.39
TUBD1-216ENST00000613721 FBXW10Q5XX13 1052 aa12.64□□□□□ -0.39
TUBD1-216ENST00000613721 GSTA5Q7RTV2 222 aa12.64□□□□□ -0.39
TUBD1-216ENST00000613721 RCOR2Q8IZ40 523 aa12.64□□□□□ -0.39
TUBD1-216ENST00000613721 RNF149Q8NC42 400 aa12.64□□□□□ -0.39
TUBD1-216ENST00000613721 TMEM35BQ8NCS4 154 aa12.64□□□□□ -0.39
TUBD1-216ENST00000613721 ARHGEF2Q92974 986 aaKnown RBP12.64□□□□□ -0.39
TUBD1-216ENST00000613721 ZNF668Q96K58 619 aaPredicted RBP12.64□□□□□ -0.39
TUBD1-216ENST00000613721 OSBPL7Q9BZF2 842 aa12.64□□□□□ -0.39
TUBD1-216ENST00000613721 MGAMO43451 1857 aa12.64□□□□□ -0.39
TUBD1-216ENST00000613721 PI4K2BG5E9Z4 385 aa12.64□□□□□ -0.39
TUBD1-216ENST00000613721 TCF4P15884 667 aa12.64□□□□□ -0.39
TUBD1-216ENST00000613721 ATF7P17544 494 aaPredicted RBP12.64□□□□□ -0.39
TUBD1-216ENST00000613721 MCL1Q07820 350 aa12.64□□□□□ -0.39
TUBD1-216ENST00000613721 ZNF252P-AS1Q0IIN9 211 aa12.64□□□□□ -0.39
TUBD1-216ENST00000613721 ZNF699Q32M78 642 aa12.64□□□□□ -0.39
TUBD1-216ENST00000613721 ATP13A4Q4VNC1 1196 aa12.64□□□□□ -0.39
TUBD1-216ENST00000613721 KAZNQ674X7 775 aa12.64□□□□□ -0.39
TUBD1-216ENST00000613721 DCUN1D2Q6PH85 259 aa12.64□□□□□ -0.39
TUBD1-216ENST00000613721 CCDC13Q8IYE1 715 aa12.64□□□□□ -0.39
TUBD1-216ENST00000613721 LRRC71Q8N4P6 559 aa12.64□□□□□ -0.39
TUBD1-216ENST00000613721 CCDC197Q8NCU1 140 aa12.64□□□□□ -0.39
TUBD1-216ENST00000613721 P3H4Q92791 437 aa12.64□□□□□ -0.39
TUBD1-216ENST00000613721 SLITRK1Q96PX8 696 aa12.64□□□□□ -0.39
TUBD1-216ENST00000613721 MMP19Q99542 508 aa12.64□□□□□ -0.39
TUBD1-216ENST00000613721 MPHOSPH6Q99547 160 aaKnown RBP12.64□□□□□ -0.39
TUBD1-216ENST00000613721 JPH2Q9BR39 696 aaPredicted RBP12.64□□□□□ -0.39
TUBD1-216ENST00000613721 ZNF518BQ9C0D4 1074 aa12.64□□□□□ -0.39
TUBD1-216ENST00000613721 C2orf40Q9H1Z8 148 aa12.64□□□□□ -0.39
TUBD1-216ENST00000613721 RRAGCQ9HB90 399 aa12.64□□□□□ -0.39
TUBD1-216ENST00000613721 CPSF3Q9UKF6 684 aaKnown RBP12.64□□□□□ -0.39
TUBD1-216ENST00000613721 TCRBV5S1A1TA0A578 114 aa12.63□□□□□ -0.39
TUBD1-216ENST00000613721 NOP56O00567 594 aaKnown RBP12.63□□□□□ -0.39
TUBD1-216ENST00000613721 ABLIM1O14639 778 aa12.63□□□□□ -0.39
TUBD1-216ENST00000613721 ASAP2O43150 1006 aa12.63□□□□□ -0.39
TUBD1-216ENST00000613721 KRT10P13645 584 aa12.63□□□□□ -0.39
TUBD1-216ENST00000613721 KLRC2P26717 231 aa12.63□□□□□ -0.39
TUBD1-216ENST00000613721 IFNAR2P48551 515 aa12.63□□□□□ -0.39
TUBD1-216ENST00000613721 TFAMQ00059 246 aaKnown RBP12.63□□□□□ -0.39
TUBD1-216ENST00000613721 LRRC38Q5VT99 294 aa12.63□□□□□ -0.39
TUBD1-216ENST00000613721 SCARA5Q6ZMJ2 495 aa12.63□□□□□ -0.39
TUBD1-216ENST00000613721 EXOC8Q8IYI6 725 aa12.63□□□□□ -0.39
TUBD1-216ENST00000613721 LRRC34Q8IZ02 419 aa12.63□□□□□ -0.39
TUBD1-216ENST00000613721 ANKS4BQ8N8V4 417 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms