RNA–Protein interactions for RNA: ENST00000612509.4

SEMA3B-211, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-211ENST00000612509 AP3M2P53677 418 aa19.42■□□□□ 0.7
SEMA3B-211ENST00000612509 NTHL1P78549 312 aa19.42■□□□□ 0.7
SEMA3B-211ENST00000612509 TDRD10Q5VZ19 366 aaKnown RBP19.42■□□□□ 0.7
SEMA3B-211ENST00000612509 ADGRF2Q8IZF7 708 aa19.42■□□□□ 0.7
SEMA3B-211ENST00000612509 ZDHHC14Q8IZN3 488 aa19.42■□□□□ 0.7
SEMA3B-211ENST00000612509 THEM5Q8N1Q8 247 aa19.42■□□□□ 0.7
SEMA3B-211ENST00000612509 SPATA18Q8TC71 538 aa19.42■□□□□ 0.7
SEMA3B-211ENST00000612509 TMC2Q8TDI7 906 aa19.42■□□□□ 0.7
SEMA3B-211ENST00000612509 ACSF2Q96CM8 615 aaPredicted RBP19.42■□□□□ 0.7
SEMA3B-211ENST00000612509 IPO9Q96P70 1041 aaKnown RBP19.42■□□□□ 0.7
SEMA3B-211ENST00000612509 NOTCH4Q99466 2003 aa19.42■□□□□ 0.7
SEMA3B-211ENST00000612509 PI4K2BG5E9Z4 385 aa19.41■□□□□ 0.7
SEMA3B-211ENST00000612509 N4BP1O75113 896 aaKnown RBP19.41■□□□□ 0.7
SEMA3B-211ENST00000612509 DLG4P78352 724 aa19.41■□□□□ 0.7
SEMA3B-211ENST00000612509 TWF1Q12792 350 aa19.41■□□□□ 0.7
SEMA3B-211ENST00000612509 ADAM9Q13443 819 aa19.41■□□□□ 0.7
SEMA3B-211ENST00000612509 BIRC3Q13489 604 aa19.41■□□□□ 0.7
SEMA3B-211ENST00000612509 TRPC3Q13507 836 aa19.41■□□□□ 0.7
SEMA3B-211ENST00000612509 SLC39A12Q504Y0 691 aa19.41■□□□□ 0.7
SEMA3B-211ENST00000612509 CENPPQ6IPU0 288 aa19.41■□□□□ 0.7
SEMA3B-211ENST00000612509 CLEC17AQ6ZS10 378 aa19.41■□□□□ 0.7
SEMA3B-211ENST00000612509 INTS8Q75QN2 995 aaKnown RBP19.41■□□□□ 0.7
SEMA3B-211ENST00000612509 OSTM1Q86WC4 334 aa19.41■□□□□ 0.7
SEMA3B-211ENST00000612509 FAM186BQ8IYM0 893 aa19.41■□□□□ 0.7
SEMA3B-211ENST00000612509 ADSSL1Q8N142 457 aa19.41■□□□□ 0.7
SEMA3B-211ENST00000612509 PLCD3Q8N3E9 789 aa19.41■□□□□ 0.7
SEMA3B-211ENST00000612509 TSG101Q99816 390 aa19.41■□□□□ 0.7
SEMA3B-211ENST00000612509 CRISPLD1Q9H336 500 aa19.41■□□□□ 0.7
SEMA3B-211ENST00000612509 EPHX3Q9H6B9 360 aa19.41■□□□□ 0.7
SEMA3B-211ENST00000612509 HCFC1R1Q9NWW0 138 aa19.41■□□□□ 0.7
SEMA3B-211ENST00000612509 PHACTR2O75167 634 aa19.4■□□□□ 0.7
SEMA3B-211ENST00000612509 STAU1O95793 577 aaKnown RBP19.4■□□□□ 0.7
SEMA3B-211ENST00000612509 CST3P01034 146 aaPredicted RBP19.4■□□□□ 0.7
SEMA3B-211ENST00000612509 ALADP13716 330 aa19.4■□□□□ 0.7
SEMA3B-211ENST00000612509 FSHRP23945 695 aa19.4■□□□□ 0.7
SEMA3B-211ENST00000612509 GBP2P32456 591 aaPredicted RBP19.4■□□□□ 0.7
SEMA3B-211ENST00000612509 PSMC2P35998 433 aaKnown RBP19.4■□□□□ 0.7
SEMA3B-211ENST00000612509 MYL7Q01449 175 aa19.4■□□□□ 0.7
SEMA3B-211ENST00000612509 STIM1Q13586 685 aa19.4■□□□□ 0.7
SEMA3B-211ENST00000612509 SOWAHAQ2M3V2 549 aa19.4■□□□□ 0.7
SEMA3B-211ENST00000612509 PABPC1LQ4VXU2 614 aaKnown RBP19.4■□□□□ 0.7
SEMA3B-211ENST00000612509 ISM2Q6H9L7 571 aa19.4■□□□□ 0.7
SEMA3B-211ENST00000612509 TTC9BQ8N6N2 239 aa19.4■□□□□ 0.7
SEMA3B-211ENST00000612509 ATAD1Q8NBU5 361 aa19.4■□□□□ 0.7
SEMA3B-211ENST00000612509 MYADMQ96S97 322 aa19.4■□□□□ 0.7
SEMA3B-211ENST00000612509 MKNK1Q9BUB5 465 aa19.4■□□□□ 0.7
SEMA3B-211ENST00000612509 DDX43Q9NXZ2 648 aaKnown RBP19.4■□□□□ 0.7
SEMA3B-211ENST00000612509 DNMT3BQ9UBC3 853 aaKnown RBP19.4■□□□□ 0.7
SEMA3B-211ENST00000612509 TRIM49BA6NDI0 452 aa19.39■□□□□ 0.69
SEMA3B-211ENST00000612509 PSMA7O14818 248 aa19.39■□□□□ 0.69
SEMA3B-211ENST00000612509 C4BPAP04003 597 aaKnown RBP19.39■□□□□ 0.69
SEMA3B-211ENST00000612509 TRIM49P0CI25 452 aa19.39■□□□□ 0.69
SEMA3B-211ENST00000612509 TRIM49CP0CI26 452 aa19.39■□□□□ 0.69
SEMA3B-211ENST00000612509 KRT13P13646 458 aa19.39■□□□□ 0.69
SEMA3B-211ENST00000612509 VAMP7P51809 220 aa19.39■□□□□ 0.69
SEMA3B-211ENST00000612509 PMS1P54277 932 aaKnown RBP19.39■□□□□ 0.69
SEMA3B-211ENST00000612509 MYL6P60660 151 aa19.39■□□□□ 0.69
SEMA3B-211ENST00000612509 TSPY1Q01534 308 aa19.39■□□□□ 0.69
SEMA3B-211ENST00000612509 ENPEPQ07075 957 aa19.39■□□□□ 0.69
SEMA3B-211ENST00000612509 DUSP4Q13115 394 aa19.39■□□□□ 0.69
SEMA3B-211ENST00000612509 PLD1Q13393 1074 aa19.39■□□□□ 0.69
SEMA3B-211ENST00000612509 INTS6LQ5JSJ4 861 aaKnown RBP19.39■□□□□ 0.69
SEMA3B-211ENST00000612509 C1orf220Q5T0J3 134 aa19.39■□□□□ 0.69
SEMA3B-211ENST00000612509 DPH6Q7L8W6 267 aa19.39■□□□□ 0.69
SEMA3B-211ENST00000612509 LIMS2Q7Z4I7 341 aa19.39■□□□□ 0.69
SEMA3B-211ENST00000612509 ZC3H3Q8IXZ2 948 aaKnown RBP19.39■□□□□ 0.69
SEMA3B-211ENST00000612509 DCP1BQ8IZD4 617 aaKnown RBP19.39■□□□□ 0.69
SEMA3B-211ENST00000612509 KBTBD7Q8WVZ9 684 aa19.39■□□□□ 0.69
SEMA3B-211ENST00000612509 SYAP1Q96A49 352 aaPredicted RBP19.39■□□□□ 0.69
SEMA3B-211ENST00000612509 XYLT2Q9H1B5 865 aa19.39■□□□□ 0.69
SEMA3B-211ENST00000612509 EPS15L1Q9UBC2 864 aa19.39■□□□□ 0.69
SEMA3B-211ENST00000612509 BIN1O00499 593 aa19.38■□□□□ 0.69
SEMA3B-211ENST00000612509 GABRDO14764 452 aa19.38■□□□□ 0.69
SEMA3B-211ENST00000612509 CETN3O15182 167 aa19.38■□□□□ 0.69
SEMA3B-211ENST00000612509 HCRTO43612 131 aa19.38■□□□□ 0.69
SEMA3B-211ENST00000612509 CLSTN1O94985 981 aa19.38■□□□□ 0.69
SEMA3B-211ENST00000612509 RHOP08100 348 aa19.38■□□□□ 0.69
SEMA3B-211ENST00000612509 EPB41P11171 864 aaKnown RBP19.38■□□□□ 0.69
SEMA3B-211ENST00000612509 CD44P16070 742 aaKnown RBP19.38■□□□□ 0.69
SEMA3B-211ENST00000612509 BMP6P22004 513 aa19.38■□□□□ 0.69
SEMA3B-211ENST00000612509 ACAT1P24752 427 aaKnown RBP19.38■□□□□ 0.69
SEMA3B-211ENST00000612509 ATICP31939 592 aa19.38■□□□□ 0.69
SEMA3B-211ENST00000612509 PPP1R2P41236 205 aa19.38■□□□□ 0.69
SEMA3B-211ENST00000612509 LHX1P48742 406 aa19.38■□□□□ 0.69
SEMA3B-211ENST00000612509 TNNC1P63316 161 aa19.38■□□□□ 0.69
SEMA3B-211ENST00000612509 LRRC63Q05C16 580 aa19.38■□□□□ 0.69
SEMA3B-211ENST00000612509 SMARCB1Q12824 385 aa19.38■□□□□ 0.69
SEMA3B-211ENST00000612509 NCOA4Q13772 614 aa19.38■□□□□ 0.69
SEMA3B-211ENST00000612509 MORC3Q14149 939 aa19.38■□□□□ 0.69
SEMA3B-211ENST00000612509 PTPN21Q16825 1174 aa19.38■□□□□ 0.69
SEMA3B-211ENST00000612509 ZNF699Q32M78 642 aa19.38■□□□□ 0.69
SEMA3B-211ENST00000612509 ZACNQ401N2 412 aa19.38■□□□□ 0.69
SEMA3B-211ENST00000612509 LRRTM3Q86VH5 581 aa19.38■□□□□ 0.69
SEMA3B-211ENST00000612509 ELMOD1Q8N336 334 aa19.38■□□□□ 0.69
SEMA3B-211ENST00000612509 C2orf15Q8WU43 125 aaKnown RBP19.38■□□□□ 0.69
SEMA3B-211ENST00000612509 EEF2KMTQ96G04 330 aa19.38■□□□□ 0.69
SEMA3B-211ENST00000612509 ACBD6Q9BR61 282 aa19.38■□□□□ 0.69
SEMA3B-211ENST00000612509 VRTNQ9H8Y1 702 aa19.38■□□□□ 0.69
SEMA3B-211ENST00000612509 HSFX1Q9UBD0 423 aa19.38■□□□□ 0.69
SEMA3B-211ENST00000612509 IKBKBO14920 756 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms