RNA–Protein interactions for RNA: ENST00000612497.1

SSX3-204, Transcript of SSX family member 3, humanhuman

TSL 5 BASIC

Gene SSX3, Length 1,030 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-204ENST00000612497 KALRNO60229 2985 aa11.26□□□□□ -0.61
SSX3-204ENST00000612497 KIAA1549LQ6ZVL6 1849 aa11.25□□□□□ -0.61
SSX3-204ENST00000612497 TNRC6BQ9UPQ9 1833 aaKnown RBP11.25□□□□□ -0.61
SSX3-204ENST00000612497 CYSRT1A8MQ03 144 aa11.25□□□□□ -0.61
SSX3-204ENST00000612497 MAP3K13O43283 966 aa11.25□□□□□ -0.61
SSX3-204ENST00000612497 VNN2O95498 520 aa11.25□□□□□ -0.61
SSX3-204ENST00000612497 PRB1P04280 392 aa11.25□□□□□ -0.61
SSX3-204ENST00000612497 CFIP05156 583 aa11.25□□□□□ -0.61
SSX3-204ENST00000612497 EDN1P05305 212 aa11.25□□□□□ -0.61
SSX3-204ENST00000612497 ARSAP15289 507 aa11.25□□□□□ -0.61
SSX3-204ENST00000612497 RPL9P32969 192 aaKnown RBP11.25□□□□□ -0.61
SSX3-204ENST00000612497 OSTNP61366 133 aa11.25□□□□□ -0.61
SSX3-204ENST00000612497 CCT2P78371 535 aaKnown RBP11.25□□□□□ -0.61
SSX3-204ENST00000612497 KRT32Q14532 448 aa11.25□□□□□ -0.61
SSX3-204ENST00000612497 DIEXFQ68CQ4 756 aaKnown RBP11.25□□□□□ -0.61
SSX3-204ENST00000612497 NAIF1Q69YI7 327 aaPredicted RBP11.25□□□□□ -0.61
SSX3-204ENST00000612497 GALNT17Q6IS24 598 aa11.25□□□□□ -0.61
SSX3-204ENST00000612497 LPCAT2Q7L5N7 544 aa11.25□□□□□ -0.61
SSX3-204ENST00000612497 TTC30AQ86WT1 665 aa11.25□□□□□ -0.61
SSX3-204ENST00000612497 SYT12Q8IV01 421 aa11.25□□□□□ -0.61
SSX3-204ENST00000612497 SLFN12Q8IYM2 578 aa11.25□□□□□ -0.61
SSX3-204ENST00000612497 DAGLBQ8NCG7 672 aa11.25□□□□□ -0.61
SSX3-204ENST00000612497 MCPH1Q8NEM0 835 aa11.25□□□□□ -0.61
SSX3-204ENST00000612497 BEST2Q8NFU1 509 aa11.25□□□□□ -0.61
SSX3-204ENST00000612497 MDM1Q8TC05 714 aa11.25□□□□□ -0.61
SSX3-204ENST00000612497 PSMG2Q969U7 264 aa11.25□□□□□ -0.61
SSX3-204ENST00000612497 ZMAT2Q96NC0 199 aaKnown RBP11.25□□□□□ -0.61
SSX3-204ENST00000612497 GCNAQ96QF7 691 aa11.25□□□□□ -0.61
SSX3-204ENST00000612497 HSD17B14Q9BPX1 270 aa11.25□□□□□ -0.61
SSX3-204ENST00000612497 CCDC94Q9BW85 323 aaPredicted RBP11.25□□□□□ -0.61
SSX3-204ENST00000612497 CCDC113Q9H0I3 377 aa11.25□□□□□ -0.61
SSX3-204ENST00000612497 NCOA5Q9HCD5 579 aaKnown RBP11.25□□□□□ -0.61
SSX3-204ENST00000612497 SCUBE2Q9NQ36 999 aa11.25□□□□□ -0.61
SSX3-204ENST00000612497 TMEM74BQ9NUR3 256 aa11.25□□□□□ -0.61
SSX3-204ENST00000612497 MBD1Q9UIS9 605 aaPredicted RBP11.25□□□□□ -0.61
SSX3-204ENST00000612497 ASB3Q9Y575 518 aa11.25□□□□□ -0.61
SSX3-204ENST00000612497 NID2Q14112 1375 aa11.25□□□□□ -0.61
SSX3-204ENST00000612497 PTPRDP23468 1912 aa11.25□□□□□ -0.61
SSX3-204ENST00000612497 CEP192Q8TEP8 1941 aa11.25□□□□□ -0.61
SSX3-204ENST00000612497 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.24□□□□□ -0.61
SSX3-204ENST00000612497 SOAT2O75908 522 aa11.24□□□□□ -0.61
SSX3-204ENST00000612497 ATP2B1P20020 1258 aa11.24□□□□□ -0.61
SSX3-204ENST00000612497 WEE1P30291 646 aa11.24□□□□□ -0.61
SSX3-204ENST00000612497 YWHAHQ04917 246 aaPredicted RBP11.24□□□□□ -0.61
SSX3-204ENST00000612497 SSRP1Q08945 709 aaKnown RBP11.24□□□□□ -0.61
SSX3-204ENST00000612497 NPY5RQ15761 445 aa11.24□□□□□ -0.61
SSX3-204ENST00000612497 TSGA10IPQ3SY00 556 aa11.24□□□□□ -0.61
SSX3-204ENST00000612497 XKR4Q5GH76 650 aa11.24□□□□□ -0.61
SSX3-204ENST00000612497 ATF7IP2Q5U623 682 aa11.24□□□□□ -0.61
SSX3-204ENST00000612497 CC2D1AQ6P1N0 951 aaPredicted RBP11.24□□□□□ -0.61
SSX3-204ENST00000612497 SLC23A3Q6PIS1 610 aa11.24□□□□□ -0.61
SSX3-204ENST00000612497 ALKAL1Q6UXT8 129 aa11.24□□□□□ -0.61
SSX3-204ENST00000612497 CCNI2Q6ZMN8 369 aaPredicted RBP11.24□□□□□ -0.61
SSX3-204ENST00000612497 ITIH5Q86UX2 942 aa11.24□□□□□ -0.61
SSX3-204ENST00000612497 TMEFF1Q8IYR6 380 aa11.24□□□□□ -0.61
SSX3-204ENST00000612497 CEP120Q8N960 986 aa11.24□□□□□ -0.61
SSX3-204ENST00000612497 BSNDQ8WZ55 320 aa11.24□□□□□ -0.61
SSX3-204ENST00000612497 C18orf25Q96B23 403 aaPredicted RBP11.24□□□□□ -0.61
SSX3-204ENST00000612497 SLC46A2Q9BY10 475 aa11.24□□□□□ -0.61
SSX3-204ENST00000612497 FSCN3Q9NQT6 498 aa11.24□□□□□ -0.61
SSX3-204ENST00000612497 PCDHB8Q9UN66 801 aa11.24□□□□□ -0.61
SSX3-204ENST00000612497 TIMM13Q9Y5L4 95 aaPredicted RBP11.24□□□□□ -0.61
SSX3-204ENST00000612497 DENND4CQ5VZ89 1909 aa11.24□□□□□ -0.61
SSX3-204ENST00000612497 TENM4Q6N022 2769 aa11.23□□□□□ -0.61
SSX3-204ENST00000612497 PTPRBP23467 1997 aa11.23□□□□□ -0.61
SSX3-204ENST00000612497 TNFRSF10BO14763 440 aa11.23□□□□□ -0.61
SSX3-204ENST00000612497 OPHN1O60890 802 aa11.23□□□□□ -0.61
SSX3-204ENST00000612497 GJA4P35212 333 aa11.23□□□□□ -0.61
SSX3-204ENST00000612497 GRM5P41594 1212 aa11.23□□□□□ -0.61
SSX3-204ENST00000612497 PTGER3P43115 390 aa11.23□□□□□ -0.61
SSX3-204ENST00000612497 BFSP1Q12934 665 aa11.23□□□□□ -0.61
SSX3-204ENST00000612497 GPR17Q13304 367 aa11.23□□□□□ -0.61
SSX3-204ENST00000612497 HNRNPDQ14103 355 aaKnown RBP11.23□□□□□ -0.61
SSX3-204ENST00000612497 TRIP6Q15654 476 aaKnown RBP11.23□□□□□ -0.61
SSX3-204ENST00000612497 NT5DC1Q5TFE4 455 aa11.23□□□□□ -0.61
SSX3-204ENST00000612497 CENPPQ6IPU0 288 aa11.23□□□□□ -0.61
SSX3-204ENST00000612497 RASSF3Q86WH2 238 aa11.23□□□□□ -0.61
SSX3-204ENST00000612497 CMTM8Q8IZV2 173 aa11.23□□□□□ -0.61
SSX3-204ENST00000612497 TTC9BQ8N6N2 239 aa11.23□□□□□ -0.61
SSX3-204ENST00000612497 PNPLA1Q8N8W4 532 aa11.23□□□□□ -0.61
SSX3-204ENST00000612497 ATAD1Q8NBU5 361 aa11.23□□□□□ -0.61
SSX3-204ENST00000612497 MDGA1Q8NFP4 955 aa11.23□□□□□ -0.61
SSX3-204ENST00000612497 RLN3Q8WXF3 142 aa11.23□□□□□ -0.61
SSX3-204ENST00000612497 ADAMTS14Q8WXS8 1223 aa11.23□□□□□ -0.61
SSX3-204ENST00000612497 EZH1Q92800 747 aaPredicted RBP11.23□□□□□ -0.61
SSX3-204ENST00000612497 CD101Q93033 1021 aa11.23□□□□□ -0.61
SSX3-204ENST00000612497 CNOT6LQ96LI5 555 aaKnown RBP11.23□□□□□ -0.61
SSX3-204ENST00000612497 NAP1L4Q99733 375 aaKnown RBP11.23□□□□□ -0.61
SSX3-204ENST00000612497 KIFC3Q9BVG8 833 aa11.23□□□□□ -0.61
SSX3-204ENST00000612497 OXCT2Q9BYC2 517 aaPredicted RBP11.23□□□□□ -0.61
SSX3-204ENST00000612497 TBX20Q9UMR3 447 aa11.23□□□□□ -0.61
SSX3-204ENST00000612497 PCDHA12Q9UN75 941 aa11.23□□□□□ -0.61
SSX3-204ENST00000612497 CCL26Q9Y258 94 aa11.23□□□□□ -0.61
SSX3-204ENST00000612497 PCDHB9Q9Y5E1 797 aa11.23□□□□□ -0.61
SSX3-204ENST00000612497 ATXN2Q99700 1313 aaKnown RBP11.23□□□□□ -0.61
SSX3-204ENST00000612497 GOLGA4Q13439 2230 aaKnown RBP11.23□□□□□ -0.61
SSX3-204ENST00000612497 OR6C75A6NL08 312 aa11.22□□□□□ -0.61
SSX3-204ENST00000612497 OAZ2O95190 189 aa11.22□□□□□ -0.61
SSX3-204ENST00000612497 DEXIO95424 95 aa11.22□□□□□ -0.61
SSX3-204ENST00000612497 XRCC6P12956 609 aaKnown RBP eCLIP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms