RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 OAS1P00973 400 aaKnown RBP14.83□□□□□ -0.03
COL6A1-207ENST00000612273 SLC1A1P43005 524 aa14.83□□□□□ -0.03
COL6A1-207ENST00000612273 BASP1P80723 227 aaKnown RBP14.83□□□□□ -0.03
COL6A1-207ENST00000612273 CENPCQ03188 943 aa14.83□□□□□ -0.03
COL6A1-207ENST00000612273 STAT4Q14765 748 aa14.83□□□□□ -0.03
COL6A1-207ENST00000612273 MTFR1Q15390 333 aa14.83□□□□□ -0.03
COL6A1-207ENST00000612273 PPP1R21Q6ZMI0 780 aa14.83□□□□□ -0.03
COL6A1-207ENST00000612273 MRPL47Q9HD33 250 aaKnown RBP14.83□□□□□ -0.03
COL6A1-207ENST00000612273 ANKEF1Q9NU02 776 aa14.83□□□□□ -0.03
COL6A1-207ENST00000612273 ENTPD5O75356 428 aa14.83□□□□□ -0.04
COL6A1-207ENST00000612273 RGS20O76081 388 aa14.83□□□□□ -0.04
COL6A1-207ENST00000612273 PDHA1P08559 390 aa14.83□□□□□ -0.04
COL6A1-207ENST00000612273 CD48P09326 243 aa14.83□□□□□ -0.04
COL6A1-207ENST00000612273 RAP1GAPP47736 663 aa14.83□□□□□ -0.04
COL6A1-207ENST00000612273 MYL6P60660 151 aa14.83□□□□□ -0.04
COL6A1-207ENST00000612273 ZNF268Q14587 947 aaPredicted RBP14.83□□□□□ -0.04
COL6A1-207ENST00000612273 EMC2Q15006 297 aa14.83□□□□□ -0.04
COL6A1-207ENST00000612273 GPAT2Q6NUI2 795 aa14.83□□□□□ -0.04
COL6A1-207ENST00000612273 ZC3H18Q86VM9 953 aaKnown RBP14.83□□□□□ -0.04
COL6A1-207ENST00000612273 SENP7Q9BQF6 1050 aa14.83□□□□□ -0.04
COL6A1-207ENST00000612273 CALN1Q9BXU9 219 aa14.83□□□□□ -0.04
COL6A1-207ENST00000612273 IMPG2Q9BZV3 1241 aa14.83□□□□□ -0.04
COL6A1-207ENST00000612273 SYNCQ9H7C4 482 aa14.83□□□□□ -0.04
COL6A1-207ENST00000612273 F5H423 210 aaPredicted RBP14.83□□□□□ -0.04
COL6A1-207ENST00000612273 LIASO43766 372 aa14.83□□□□□ -0.04
COL6A1-207ENST00000612273 EXTL3O43909 919 aa14.83□□□□□ -0.04
COL6A1-207ENST00000612273 SPARCL1Q14515 664 aa14.83□□□□□ -0.04
COL6A1-207ENST00000612273 ZNF568Q3ZCX4 644 aa14.83□□□□□ -0.04
COL6A1-207ENST00000612273 TRABD2AQ86V40 505 aa14.83□□□□□ -0.04
COL6A1-207ENST00000612273 MAML1Q92585 1016 aa14.83□□□□□ -0.04
COL6A1-207ENST00000612273 HSPH1Q92598 858 aa14.83□□□□□ -0.04
COL6A1-207ENST00000612273 MIEF2Q96C03 454 aa14.83□□□□□ -0.04
COL6A1-207ENST00000612273 ZNF570Q96NI8 536 aa14.83□□□□□ -0.04
COL6A1-207ENST00000612273 SLC9A2Q9UBY0 812 aa14.83□□□□□ -0.04
COL6A1-207ENST00000612273 C10orf71Q711Q0 1435 aa14.82□□□□□ -0.04
COL6A1-207ENST00000612273 C4BPAP04003 597 aaKnown RBP14.82□□□□□ -0.04
COL6A1-207ENST00000612273 GJB1P08034 283 aa14.82□□□□□ -0.04
COL6A1-207ENST00000612273 SFNP31947 248 aa14.82□□□□□ -0.04
COL6A1-207ENST00000612273 MAN1A1P33908 653 aa14.82□□□□□ -0.04
COL6A1-207ENST00000612273 SP2Q02086 613 aa14.82□□□□□ -0.04
COL6A1-207ENST00000612273 TAF5Q15542 800 aa14.82□□□□□ -0.04
COL6A1-207ENST00000612273 GALNTL6Q49A17 601 aa14.82□□□□□ -0.04
COL6A1-207ENST00000612273 MSS51Q4VC12 460 aa14.82□□□□□ -0.04
COL6A1-207ENST00000612273 C3orf62Q6ZUJ4 267 aa14.82□□□□□ -0.04
COL6A1-207ENST00000612273 MTDHQ86UE4 582 aaKnown RBP14.82□□□□□ -0.04
COL6A1-207ENST00000612273 PYROXD1Q8WU10 500 aa14.82□□□□□ -0.04
COL6A1-207ENST00000612273 C7orf43Q8WVR3 580 aa14.82□□□□□ -0.04
COL6A1-207ENST00000612273 UTP4Q969X6 686 aaKnown RBP14.82□□□□□ -0.04
COL6A1-207ENST00000612273 GREB1LQ9C091 1923 aaPredicted RBP14.82□□□□□ -0.04
COL6A1-207ENST00000612273 SLX4Q8IY92 1834 aa14.82□□□□□ -0.04
COL6A1-207ENST00000612273 TCRBV7S3A2A0A539 114 aa14.82□□□□□ -0.04
COL6A1-207ENST00000612273 CFAP69A5D8W1 941 aa14.82□□□□□ -0.04
COL6A1-207ENST00000612273 CST8O60676 142 aa14.82□□□□□ -0.04
COL6A1-207ENST00000612273 DGAT1O75907 488 aa14.82□□□□□ -0.04
COL6A1-207ENST00000612273 ACO1P21399 889 aaKnown RBP14.82□□□□□ -0.04
COL6A1-207ENST00000612273 GCAP28676 217 aa14.82□□□□□ -0.04
COL6A1-207ENST00000612273 CDH8P55286 799 aa14.82□□□□□ -0.04
COL6A1-207ENST00000612273 BPIFB4P59827 614 aa14.82□□□□□ -0.04
COL6A1-207ENST00000612273 CXCL9Q07325 125 aa14.82□□□□□ -0.04
COL6A1-207ENST00000612273 WDR72Q3MJ13 1102 aa14.82□□□□□ -0.04
COL6A1-207ENST00000612273 FAXCQ5TGI0 409 aa14.82□□□□□ -0.04
COL6A1-207ENST00000612273 TTC8Q8TAM2 541 aa14.82□□□□□ -0.04
COL6A1-207ENST00000612273 ACTL9Q8TC94 416 aa14.82□□□□□ -0.04
COL6A1-207ENST00000612273 SLITRK1Q96PX8 696 aa14.82□□□□□ -0.04
COL6A1-207ENST00000612273 PARVAQ9NVD7 372 aa14.82□□□□□ -0.04
COL6A1-207ENST00000612273 CHMP2BQ9UQN3 213 aa14.82□□□□□ -0.04
COL6A1-207ENST00000612273 GJA3Q9Y6H8 435 aa14.82□□□□□ -0.04
COL6A1-207ENST00000612273 WDR46O15213 610 aaKnown RBP14.81□□□□□ -0.04
COL6A1-207ENST00000612273 TJP3O95049 919 aa14.81□□□□□ -0.04
COL6A1-207ENST00000612273 CYP1A1P04798 512 aaPredicted RBP14.81□□□□□ -0.04
COL6A1-207ENST00000612273 PSAPP07602 524 aa14.81□□□□□ -0.04
COL6A1-207ENST00000612273 KLRC2P26717 231 aa14.81□□□□□ -0.04
COL6A1-207ENST00000612273 CCND2P30279 289 aa14.81□□□□□ -0.04
COL6A1-207ENST00000612273 CPA2P48052 419 aa14.81□□□□□ -0.04
COL6A1-207ENST00000612273 CNTN2Q02246 1040 aa14.81□□□□□ -0.04
COL6A1-207ENST00000612273 ZNF252P-AS1Q0IIN9 211 aa14.81□□□□□ -0.04
COL6A1-207ENST00000612273 TAF11Q15544 211 aa14.81□□□□□ -0.04
COL6A1-207ENST00000612273 TAF1BQ53T94 588 aaPredicted RBP14.81□□□□□ -0.04
COL6A1-207ENST00000612273 MDH1BQ5I0G3 518 aa14.81□□□□□ -0.04
COL6A1-207ENST00000612273 NBPF12Q5TAG4 269 aaPredicted RBP14.81□□□□□ -0.04
COL6A1-207ENST00000612273 CRELD2Q6UXH1 353 aaPredicted RBP14.81□□□□□ -0.04
COL6A1-207ENST00000612273 LONP2Q86WA8 852 aa14.81□□□□□ -0.04
COL6A1-207ENST00000612273 LRRC71Q8N4P6 559 aa14.81□□□□□ -0.04
COL6A1-207ENST00000612273 FAM71DQ8N9W8 422 aa14.81□□□□□ -0.04
COL6A1-207ENST00000612273 FBXL18Q96ME1 805 aa14.81□□□□□ -0.04
COL6A1-207ENST00000612273 SLC17A7Q9P2U7 560 aa14.81□□□□□ -0.04
COL6A1-207ENST00000612273 UBR3Q6ZT12 1888 aa14.81□□□□□ -0.04
COL6A1-207ENST00000612273 VWA5AO00534 786 aa14.81□□□□□ -0.04
COL6A1-207ENST00000612273 GRAP2O75791 330 aa14.81□□□□□ -0.04
COL6A1-207ENST00000612273 UNC5CO95185 931 aa14.81□□□□□ -0.04
COL6A1-207ENST00000612273 RFC1P35251 1148 aaPredicted RBP14.81□□□□□ -0.04
COL6A1-207ENST00000612273 CTCFP49711 727 aaPredicted RBP14.81□□□□□ -0.04
COL6A1-207ENST00000612273 ZBTB16Q05516 673 aa14.81□□□□□ -0.04
COL6A1-207ENST00000612273 TCEAL1Q15170 157 aa14.81□□□□□ -0.04
COL6A1-207ENST00000612273 CDO1Q16878 200 aa14.81□□□□□ -0.04
COL6A1-207ENST00000612273 SPOCD1Q6ZMY3 1216 aa14.81□□□□□ -0.04
COL6A1-207ENST00000612273 VSIG10LQ86VR7 867 aa14.81□□□□□ -0.04
COL6A1-207ENST00000612273 ZCCHC9Q8N567 271 aaKnown RBP14.81□□□□□ -0.04
COL6A1-207ENST00000612273 CEP120Q8N960 986 aa14.81□□□□□ -0.04
COL6A1-207ENST00000612273 TTC17Q96AE7 1141 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms