RNA–Protein interactions for RNA: ENST00000610454.4

SENP3-209, Transcript of SUMO specific peptidase 3, humanhuman

TSL 3

Gene SENP3, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-209ENST00000610454 COL9A1P20849 921 aa14.4□□□□□ -0.1
SENP3-209ENST00000610454 EPHB3P54753 998 aa14.4□□□□□ -0.1
SENP3-209ENST00000610454 MYL7Q01449 175 aa14.4□□□□□ -0.1
SENP3-209ENST00000610454 SMARCB1Q12824 385 aa14.4□□□□□ -0.1
SENP3-209ENST00000610454 DUSP4Q13115 394 aa14.4□□□□□ -0.1
SENP3-209ENST00000610454 TRPC3Q13507 836 aa14.4□□□□□ -0.1
SENP3-209ENST00000610454 TDGQ13569 410 aa14.4□□□□□ -0.1
SENP3-209ENST00000610454 CYP4A22Q5TCH4 519 aa14.4□□□□□ -0.1
SENP3-209ENST00000610454 CEP135Q66GS9 1140 aa14.4□□□□□ -0.1
SENP3-209ENST00000610454 HPDLQ96IR7 371 aa14.4□□□□□ -0.1
SENP3-209ENST00000610454 FAM84AQ96KN4 292 aa14.4□□□□□ -0.1
SENP3-209ENST00000610454 MFSD14AQ96MC6 490 aa14.4□□□□□ -0.1
SENP3-209ENST00000610454 ASAH2Q9NR71 780 aa14.4□□□□□ -0.1
SENP3-209ENST00000610454 SIX4Q9UIU6 781 aa14.4□□□□□ -0.1
SENP3-209ENST00000610454 YIPF1Q9Y548 306 aa14.4□□□□□ -0.1
SENP3-209ENST00000610454 PTPRJQ12913 1337 aa14.4□□□□□ -0.1
SENP3-209ENST00000610454 MTMR11A4FU01 709 aa14.39□□□□□ -0.11
SENP3-209ENST00000610454 KINO60870 393 aaKnown RBP14.39□□□□□ -0.11
SENP3-209ENST00000610454 RPL13P26373 211 aaKnown RBP14.39□□□□□ -0.11
SENP3-209ENST00000610454 TUFMP49411 452 aaKnown RBP14.39□□□□□ -0.11
SENP3-209ENST00000610454 AP3M2P53677 418 aa14.39□□□□□ -0.11
SENP3-209ENST00000610454 BIRC3Q13489 604 aa14.39□□□□□ -0.11
SENP3-209ENST00000610454 PNOCQ13519 176 aa14.39□□□□□ -0.11
SENP3-209ENST00000610454 VEPH1Q14D04 833 aa14.39□□□□□ -0.11
SENP3-209ENST00000610454 TAF12Q16514 161 aa14.39□□□□□ -0.11
SENP3-209ENST00000610454 MGAT5BQ3V5L5 792 aa14.39□□□□□ -0.11
SENP3-209ENST00000610454 MTSS1LQ765P7 747 aa14.39□□□□□ -0.11
SENP3-209ENST00000610454 TRAPPC11Q7Z392 1133 aa14.39□□□□□ -0.11
SENP3-209ENST00000610454 SLC9A9Q8IVB4 645 aa14.39□□□□□ -0.11
SENP3-209ENST00000610454 SUGP1Q8IWZ8 645 aaKnown RBP14.39□□□□□ -0.11
SENP3-209ENST00000610454 ADGRF2Q8IZF7 708 aa14.39□□□□□ -0.11
SENP3-209ENST00000610454 GUF1Q8N442 669 aaKnown RBP14.39□□□□□ -0.11
SENP3-209ENST00000610454 PDCL2Q8N4E4 241 aa14.39□□□□□ -0.11
SENP3-209ENST00000610454 TOP6BLQ8N6T0 577 aa14.39□□□□□ -0.11
SENP3-209ENST00000610454 LEMD2Q8NC56 503 aa14.39□□□□□ -0.11
SENP3-209ENST00000610454 OR10T2Q8NGX3 314 aa14.39□□□□□ -0.11
SENP3-209ENST00000610454 ITFG1Q8TB96 612 aa14.39□□□□□ -0.11
SENP3-209ENST00000610454 SPATA18Q8TC71 538 aa14.39□□□□□ -0.11
SENP3-209ENST00000610454 C2orf15Q8WU43 125 aaKnown RBP14.39□□□□□ -0.11
SENP3-209ENST00000610454 ING5Q8WYH8 240 aa14.39□□□□□ -0.11
SENP3-209ENST00000610454 FGF13Q92913 245 aa14.39□□□□□ -0.11
SENP3-209ENST00000610454 PBXIP1Q96AQ6 731 aa14.39□□□□□ -0.11
SENP3-209ENST00000610454 TMEM209Q96SK2 561 aa14.39□□□□□ -0.11
SENP3-209ENST00000610454 MMS19Q96T76 1030 aa14.39□□□□□ -0.11
SENP3-209ENST00000610454 SEPT5Q99719 369 aaPredicted RBP14.39□□□□□ -0.11
SENP3-209ENST00000610454 ZCWPW1Q9H0M4 648 aa14.39□□□□□ -0.11
SENP3-209ENST00000610454 KCTD10Q9H3F6 313 aa14.39□□□□□ -0.11
SENP3-209ENST00000610454 GDAP2Q9NXN4 497 aa14.39□□□□□ -0.11
SENP3-209ENST00000610454 DDX43Q9NXZ2 648 aaKnown RBP14.39□□□□□ -0.11
SENP3-209ENST00000610454 MAPK8IP1Q9UQF2 711 aa14.39□□□□□ -0.11
SENP3-209ENST00000610454 TECTAO75443 2155 aa14.39□□□□□ -0.11
SENP3-209ENST00000610454 PCSK1P29120 753 aa14.38□□□□□ -0.11
SENP3-209ENST00000610454 LHX1P48742 406 aa14.38□□□□□ -0.11
SENP3-209ENST00000610454 TNNC1P63316 161 aa14.38□□□□□ -0.11
SENP3-209ENST00000610454 NFE2Q16621 373 aaPredicted RBP14.38□□□□□ -0.11
SENP3-209ENST00000610454 CENPPQ6IPU0 288 aa14.38□□□□□ -0.11
SENP3-209ENST00000610454 HFE2Q6ZVN8 426 aa14.38□□□□□ -0.11
SENP3-209ENST00000610454 DPH6Q7L8W6 267 aa14.38□□□□□ -0.11
SENP3-209ENST00000610454 ITIH5Q86UX2 942 aa14.38□□□□□ -0.11
SENP3-209ENST00000610454 ATAD1Q8NBU5 361 aa14.38□□□□□ -0.11
SENP3-209ENST00000610454 FAM200AQ8TCP9 573 aa14.38□□□□□ -0.11
SENP3-209ENST00000610454 SPPL2BQ8TCT7 592 aa14.38□□□□□ -0.11
SENP3-209ENST00000610454 SMARCE1Q969G3 411 aa14.38□□□□□ -0.11
SENP3-209ENST00000610454 BORCS6Q96GS4 357 aa14.38□□□□□ -0.11
SENP3-209ENST00000610454 TIGD1Q96MW7 591 aa14.38□□□□□ -0.11
SENP3-209ENST00000610454 GSDMAQ96QA5 445 aa14.38□□□□□ -0.11
SENP3-209ENST00000610454 GTPBP4Q9BZE4 634 aaKnown RBP14.38□□□□□ -0.11
SENP3-209ENST00000610454 MFSD1Q9H3U5 465 aa14.38□□□□□ -0.11
SENP3-209ENST00000610454 AVENQ9NQS1 362 aaPredicted RBP14.38□□□□□ -0.11
SENP3-209ENST00000610454 ABI2Q9NYB9 513 aaPredicted RBP14.38□□□□□ -0.11
SENP3-209ENST00000610454 CHMP5Q9NZZ3 219 aa14.38□□□□□ -0.11
SENP3-209ENST00000610454 HSFX1Q9UBD0 423 aa14.38□□□□□ -0.11
SENP3-209ENST00000610454 FBXL21Q9UKT6 434 aa14.38□□□□□ -0.11
SENP3-209ENST00000610454 L1RE1Q9UN81 338 aa14.38□□□□□ -0.11
SENP3-209ENST00000610454 DUSP12Q9UNI6 340 aa14.38□□□□□ -0.11
SENP3-209ENST00000610454 TRAF3IP3Q9Y228 551 aa14.38□□□□□ -0.11
SENP3-209ENST00000610454 SLC27A5Q9Y2P5 690 aa14.38□□□□□ -0.11
SENP3-209ENST00000610454 MYL4P12829 197 aa14.37□□□□□ -0.11
SENP3-209ENST00000610454 KRT13P13646 458 aa14.37□□□□□ -0.11
SENP3-209ENST00000610454 NR2F2P24468 414 aa14.37□□□□□ -0.11
SENP3-209ENST00000610454 SNW1Q13573 536 aaKnown RBP14.37□□□□□ -0.11
SENP3-209ENST00000610454 NPAS3Q8IXF0 933 aa14.37□□□□□ -0.11
SENP3-209ENST00000610454 CXorf38Q8TB03 319 aa14.37□□□□□ -0.11
SENP3-209ENST00000610454 TMEM174Q8WUU8 243 aa14.37□□□□□ -0.11
SENP3-209ENST00000610454 RSAD2Q8WXG1 361 aa14.37□□□□□ -0.11
SENP3-209ENST00000610454 SYAP1Q96A49 352 aaPredicted RBP14.37□□□□□ -0.11
SENP3-209ENST00000610454 ACBD6Q9BR61 282 aa14.37□□□□□ -0.11
SENP3-209ENST00000610454 SLITRK6Q9H5Y7 841 aa14.37□□□□□ -0.11
SENP3-209ENST00000610454 DMAC2Q9NW81 257 aa14.37□□□□□ -0.11
SENP3-209ENST00000610454 GDE1Q9NZC3 331 aa14.37□□□□□ -0.11
SENP3-209ENST00000610454 ASB3Q9Y575 518 aa14.37□□□□□ -0.11
SENP3-209ENST00000610454 PCDHB5Q9Y5E4 795 aa14.37□□□□□ -0.11
SENP3-209ENST00000610454 NUMBLQ9Y6R0 609 aa14.37□□□□□ -0.11
SENP3-209ENST00000610454 NOTCH4Q99466 2003 aa14.36□□□□□ -0.11
SENP3-209ENST00000610454 FGF19O95750 216 aa14.36□□□□□ -0.11
SENP3-209ENST00000610454 RFX1P22670 979 aa14.36□□□□□ -0.11
SENP3-209ENST00000610454 CASP4P49662 377 aa14.36□□□□□ -0.11
SENP3-209ENST00000610454 STIM1Q13586 685 aa14.36□□□□□ -0.11
SENP3-209ENST00000610454 HTR4Q13639 388 aa14.36□□□□□ -0.11
SENP3-209ENST00000610454 SLC5A9Q2M3M2 681 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms