RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 RCOR2Q8IZ40 523 aa12.68□□□□□ -0.38
USP6NL-206ENST00000609853 NIPA2Q8N8Q9 360 aa12.68□□□□□ -0.38
USP6NL-206ENST00000609853 C3orf20Q8ND61 904 aa12.68□□□□□ -0.38
USP6NL-206ENST00000609853 CAPS2Q9BXY5 557 aa12.68□□□□□ -0.38
USP6NL-206ENST00000609853 TRIM31Q9BZY9 425 aa12.68□□□□□ -0.38
USP6NL-206ENST00000609853 PABPC3Q9H361 631 aaKnown RBP12.68□□□□□ -0.38
USP6NL-206ENST00000609853 GRHL1Q9NZI5 618 aa12.68□□□□□ -0.38
USP6NL-206ENST00000609853 WDR35Q9P2L0 1181 aa12.68□□□□□ -0.38
USP6NL-206ENST00000609853 ITGA11Q9UKX5 1188 aa12.68□□□□□ -0.38
USP6NL-206ENST00000609853 A0A1B0GUA9 196 aa12.67□□□□□ -0.38
USP6NL-206ENST00000609853 TCRBV5S1A1TA0A578 114 aa12.67□□□□□ -0.38
USP6NL-206ENST00000609853 NUDT17P0C025 328 aa12.67□□□□□ -0.38
USP6NL-206ENST00000609853 WEE2P0C1S8 567 aa12.67□□□□□ -0.38
USP6NL-206ENST00000609853 ARF4P18085 180 aaPredicted RBP12.67□□□□□ -0.38
USP6NL-206ENST00000609853 ITIH2P19823 946 aa12.67□□□□□ -0.38
USP6NL-206ENST00000609853 PLTPP55058 493 aa12.67□□□□□ -0.38
USP6NL-206ENST00000609853 GSCP56915 257 aaPredicted RBP12.67□□□□□ -0.38
USP6NL-206ENST00000609853 OSTNP61366 133 aa12.67□□□□□ -0.38
USP6NL-206ENST00000609853 LMNB2Q03252 620 aa12.67□□□□□ -0.38
USP6NL-206ENST00000609853 CALCOCO2Q13137 446 aa12.67□□□□□ -0.38
USP6NL-206ENST00000609853 PPP1R7Q15435 360 aa12.67□□□□□ -0.38
USP6NL-206ENST00000609853 DCAF4L1Q3SXM0 396 aa12.67□□□□□ -0.38
USP6NL-206ENST00000609853 DCUN1D2Q6PH85 259 aa12.67□□□□□ -0.38
USP6NL-206ENST00000609853 ZDHHC24Q6UX98 284 aa12.67□□□□□ -0.38
USP6NL-206ENST00000609853 CPNE8Q86YQ8 564 aa12.67□□□□□ -0.38
USP6NL-206ENST00000609853 CEP120Q8N960 986 aa12.67□□□□□ -0.38
USP6NL-206ENST00000609853 C1orf127Q8N9H9 656 aa12.67□□□□□ -0.38
USP6NL-206ENST00000609853 OR6J1Q8NGC5 347 aa12.67□□□□□ -0.38
USP6NL-206ENST00000609853 ATL2Q8NHH9 583 aa12.67□□□□□ -0.38
USP6NL-206ENST00000609853 NLRP7Q8WX94 980 aa12.67□□□□□ -0.38
USP6NL-206ENST00000609853 ART4Q93070 314 aa12.67□□□□□ -0.38
USP6NL-206ENST00000609853 TRIM7Q9C029 511 aa12.67□□□□□ -0.38
USP6NL-206ENST00000609853 PLEKHA5Q9HAU0 1116 aa12.67□□□□□ -0.38
USP6NL-206ENST00000609853 SIX4Q9UIU6 781 aa12.67□□□□□ -0.38
USP6NL-206ENST00000609853 KIAA1257Q9ULG3 409 aa12.67□□□□□ -0.38
USP6NL-206ENST00000609853 DERAQ9Y315 318 aa12.67□□□□□ -0.38
USP6NL-206ENST00000609853 SNX24Q9Y343 169 aa12.67□□□□□ -0.38
USP6NL-206ENST00000609853 TCRBV7S2A1N4TA0A589 114 aa12.66□□□□□ -0.38
USP6NL-206ENST00000609853 SRRM3A6NNA2 597 aaPredicted RBP12.66□□□□□ -0.38
USP6NL-206ENST00000609853 KRT19P08727 400 aa12.66□□□□□ -0.38
USP6NL-206ENST00000609853 ZNF286BP0CG31 522 aa12.66□□□□□ -0.38
USP6NL-206ENST00000609853 SMPD1P17405 629 aa12.66□□□□□ -0.38
USP6NL-206ENST00000609853 BRD2P25440 801 aaKnown RBP12.66□□□□□ -0.38
USP6NL-206ENST00000609853 PTPN7P35236 360 aa12.66□□□□□ -0.38
USP6NL-206ENST00000609853 FLT3P36888 993 aa12.66□□□□□ -0.38
USP6NL-206ENST00000609853 RPL21P46778 160 aaKnown RBP12.66□□□□□ -0.38
USP6NL-206ENST00000609853 PMS2P54278 862 aa12.66□□□□□ -0.38
USP6NL-206ENST00000609853 ZNF844Q08AG5 666 aa12.66□□□□□ -0.38
USP6NL-206ENST00000609853 KLF1Q13351 362 aaPredicted RBP12.66□□□□□ -0.38
USP6NL-206ENST00000609853 TMEM132DQ14C87 1099 aa12.66□□□□□ -0.38
USP6NL-206ENST00000609853 WDR72Q3MJ13 1102 aa12.66□□□□□ -0.38
USP6NL-206ENST00000609853 PPP1R15BQ5SWA1 713 aa12.66□□□□□ -0.38
USP6NL-206ENST00000609853 GJC2Q5T442 439 aaPredicted RBP12.66□□□□□ -0.38
USP6NL-206ENST00000609853 JADE1Q6IE81 842 aa12.66□□□□□ -0.38
USP6NL-206ENST00000609853 HOOK3Q86VS8 718 aa12.66□□□□□ -0.38
USP6NL-206ENST00000609853 BBOF1Q8ND07 529 aa12.66□□□□□ -0.38
USP6NL-206ENST00000609853 FBXO25Q8TCJ0 367 aa12.66□□□□□ -0.38
USP6NL-206ENST00000609853 FNIP1Q8TF40 1166 aa12.66□□□□□ -0.38
USP6NL-206ENST00000609853 ZBTB9Q96C00 473 aa12.66□□□□□ -0.38
USP6NL-206ENST00000609853 ACAP3Q96P50 834 aa12.66□□□□□ -0.38
USP6NL-206ENST00000609853 OSBPL8Q9BZF1 889 aa12.66□□□□□ -0.38
USP6NL-206ENST00000609853 DDX56Q9NY93 547 aaKnown RBP12.66□□□□□ -0.38
USP6NL-206ENST00000609853 NXF1Q9UBU9 619 aaKnown RBP12.66□□□□□ -0.38
USP6NL-206ENST00000609853 TSPAN1O60635 241 aa12.65□□□□□ -0.38
USP6NL-206ENST00000609853 VTNP04004 478 aa12.65□□□□□ -0.38
USP6NL-206ENST00000609853 NFICP08651 508 aa12.65□□□□□ -0.38
USP6NL-206ENST00000609853 RARGP13631 454 aa12.65□□□□□ -0.38
USP6NL-206ENST00000609853 NR1D1P20393 614 aa12.65□□□□□ -0.38
USP6NL-206ENST00000609853 GRM5P41594 1212 aa12.65□□□□□ -0.38
USP6NL-206ENST00000609853 RBP5P82980 135 aa12.65□□□□□ -0.38
USP6NL-206ENST00000609853 PTK6Q13882 451 aa12.65□□□□□ -0.38
USP6NL-206ENST00000609853 SLC10A6Q3KNW5 377 aa12.65□□□□□ -0.38
USP6NL-206ENST00000609853 CEP128Q6ZU80 1094 aa12.65□□□□□ -0.38
USP6NL-206ENST00000609853 POLNQ7Z5Q5 900 aa12.65□□□□□ -0.38
USP6NL-206ENST00000609853 CCDC50Q8IVM0 306 aa12.65□□□□□ -0.38
USP6NL-206ENST00000609853 KIAA0319LQ8IZA0 1049 aa12.65□□□□□ -0.38
USP6NL-206ENST00000609853 CXorf38Q8TB03 319 aa12.65□□□□□ -0.38
USP6NL-206ENST00000609853 CCHCR1Q8TD31 782 aa12.65□□□□□ -0.38
USP6NL-206ENST00000609853 TFAP2BQ92481 460 aa12.65□□□□□ -0.38
USP6NL-206ENST00000609853 ZNF668Q96K58 619 aaPredicted RBP12.65□□□□□ -0.38
USP6NL-206ENST00000609853 SCLT1Q96NL6 688 aa12.65□□□□□ -0.38
USP6NL-206ENST00000609853 DCLK3Q9C098 648 aa12.65□□□□□ -0.38
USP6NL-206ENST00000609853 MIS12Q9H081 205 aa12.65□□□□□ -0.38
USP6NL-206ENST00000609853 ATP8A1Q9Y2Q0 1164 aa12.65□□□□□ -0.38
USP6NL-206ENST00000609853 RALGAPA2Q2PPJ7 1873 aa12.65□□□□□ -0.38
USP6NL-206ENST00000609853 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.65□□□□□ -0.38
USP6NL-206ENST00000609853 A6NJR5 290 aa12.65□□□□□ -0.38
USP6NL-206ENST00000609853 SIGLEC16A6NMB1 481 aa12.65□□□□□ -0.38
USP6NL-206ENST00000609853 NDC80O14777 642 aa12.65□□□□□ -0.38
USP6NL-206ENST00000609853 CILPO75339 1184 aa12.65□□□□□ -0.38
USP6NL-206ENST00000609853 TJP3O95049 919 aa12.65□□□□□ -0.38
USP6NL-206ENST00000609853 HMGCRP04035 888 aa12.65□□□□□ -0.38
USP6NL-206ENST00000609853 ITGB3P05106 788 aa12.65□□□□□ -0.38
USP6NL-206ENST00000609853 RALAP11233 206 aa12.65□□□□□ -0.38
USP6NL-206ENST00000609853 CD19P15391 556 aa12.65□□□□□ -0.38
USP6NL-206ENST00000609853 IRAK1P51617 712 aa12.65□□□□□ -0.38
USP6NL-206ENST00000609853 RAD23BP54727 409 aa12.65□□□□□ -0.38
USP6NL-206ENST00000609853 TAS2R40P59535 323 aa12.65□□□□□ -0.38
USP6NL-206ENST00000609853 IFFO1Q0D2I5 559 aa12.65□□□□□ -0.38
USP6NL-206ENST00000609853 ZNF268Q14587 947 aaPredicted RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms