RNA–Protein interactions for RNA: ENST00000607959.5

USF2-216, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 5

Gene USF2, Length 1,920 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-216ENST00000607959 L1RE1Q9UN81 338 aa23.33■■□□□ 1.33
USF2-216ENST00000607959 PODXLO00592 558 aa23.33■■□□□ 1.32
USF2-216ENST00000607959 HCRTO43612 131 aa23.33■■□□□ 1.32
USF2-216ENST00000607959 BUB1O43683 1085 aa23.33■■□□□ 1.32
USF2-216ENST00000607959 CLTBP09497 229 aa23.33■■□□□ 1.32
USF2-216ENST00000607959 TMEM253P0C7T8 217 aa23.33■■□□□ 1.32
USF2-216ENST00000607959 GRIK3Q13003 919 aa23.33■■□□□ 1.32
USF2-216ENST00000607959 UPP1Q16831 310 aa23.33■■□□□ 1.32
USF2-216ENST00000607959 SECISBP2LQ93073 1101 aaKnown RBP23.33■■□□□ 1.32
USF2-216ENST00000607959 FAM124BQ9H5Z6 455 aaPredicted RBP23.33■■□□□ 1.32
USF2-216ENST00000607959 TMEM39AQ9NV64 488 aa23.33■■□□□ 1.32
USF2-216ENST00000607959 PUF60Q9UHX1 559 aaKnown RBP23.33■■□□□ 1.32
USF2-216ENST00000607959 PAEPP09466 180 aa23.32■■□□□ 1.32
USF2-216ENST00000607959 ABCB4P21439 1286 aa23.32■■□□□ 1.32
USF2-216ENST00000607959 NOMO3P69849 1222 aa23.32■■□□□ 1.32
USF2-216ENST00000607959 ACAD10Q6JQN1 1059 aa23.32■■□□□ 1.32
USF2-216ENST00000607959 PASD1Q8IV76 773 aa23.32■■□□□ 1.32
USF2-216ENST00000607959 APBB2Q92870 758 aa23.32■■□□□ 1.32
USF2-216ENST00000607959 TMEM176AQ96HP8 235 aa23.32■■□□□ 1.32
USF2-216ENST00000607959 TMEM106CQ9BVX2 250 aa23.32■■□□□ 1.32
USF2-216ENST00000607959 TMEM161AQ9NX61 479 aa23.32■■□□□ 1.32
USF2-216ENST00000607959 NCANO14594 1321 aa23.32■■□□□ 1.32
USF2-216ENST00000607959 MICAL3Q7RTP6 2002 aa23.32■■□□□ 1.32
USF2-216ENST00000607959 ANKRD62A6NC57 917 aa23.31■■□□□ 1.32
USF2-216ENST00000607959 TRIM43BA6NCK2 446 aa23.31■■□□□ 1.32
USF2-216ENST00000607959 SV2CQ496J9 727 aa23.31■■□□□ 1.32
USF2-216ENST00000607959 NECAB2Q7Z6G3 386 aa23.31■■□□□ 1.32
USF2-216ENST00000607959 DEFB128Q7Z7B8 93 aa23.31■■□□□ 1.32
USF2-216ENST00000607959 UBE2Q1Q7Z7E8 422 aa23.31■■□□□ 1.32
USF2-216ENST00000607959 CPA5Q8WXQ8 436 aa23.31■■□□□ 1.32
USF2-216ENST00000607959 TRIM43Q96BQ3 446 aaPredicted RBP23.31■■□□□ 1.32
USF2-216ENST00000607959 NAA35Q5VZE5 725 aa23.31■■□□□ 1.32
USF2-216ENST00000607959 TXLNBQ8N3L3 684 aa23.31■■□□□ 1.32
USF2-216ENST00000607959 WDTC1Q8N5D0 677 aa23.31■■□□□ 1.32
USF2-216ENST00000607959 KIF18AQ8NI77 898 aa23.31■■□□□ 1.32
USF2-216ENST00000607959 ELAC1Q9H777 363 aaKnown RBP23.31■■□□□ 1.32
USF2-216ENST00000607959 PCDHGC3Q9UN70 934 aa23.31■■□□□ 1.32
USF2-216ENST00000607959 F8W810 466 aa23.3■■□□□ 1.32
USF2-216ENST00000607959 TACC1O75410 805 aa23.3■■□□□ 1.32
USF2-216ENST00000607959 DDHD2O94830 711 aa23.3■■□□□ 1.32
USF2-216ENST00000607959 RPL9P32969 192 aaKnown RBP23.3■■□□□ 1.32
USF2-216ENST00000607959 AARSP49588 968 aaKnown RBP eCLIP23.3■■□□□ 1.32
USF2-216ENST00000607959 CENPCQ03188 943 aa23.3■■□□□ 1.32
USF2-216ENST00000607959 TUSC3Q13454 348 aa23.3■■□□□ 1.32
USF2-216ENST00000607959 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.3■■□□□ 1.32
USF2-216ENST00000607959 OSTM1Q86WC4 334 aa23.3■■□□□ 1.32
USF2-216ENST00000607959 ZNF280BQ86YH2 543 aa23.3■■□□□ 1.32
USF2-216ENST00000607959 RNF10Q8N5U6 811 aaKnown RBP23.3■■□□□ 1.32
USF2-216ENST00000607959 CHORDC1Q9UHD1 332 aaPredicted RBP23.3■■□□□ 1.32
USF2-216ENST00000607959 PARNO95453 639 aaKnown RBP23.29■■□□□ 1.32
USF2-216ENST00000607959 GATMP50440 423 aa23.29■■□□□ 1.32
USF2-216ENST00000607959 DSC1Q08554 894 aa23.29■■□□□ 1.32
USF2-216ENST00000607959 GLB1LQ6UWU2 654 aa23.29■■□□□ 1.32
USF2-216ENST00000607959 PDCL2Q8N4E4 241 aa23.29■■□□□ 1.32
USF2-216ENST00000607959 LPIN3Q9BQK8 851 aa23.29■■□□□ 1.32
USF2-216ENST00000607959 PRDM10Q9NQV6 1147 aa23.29■■□□□ 1.32
USF2-216ENST00000607959 COG5Q9UP83 839 aa23.29■■□□□ 1.32
USF2-216ENST00000607959 A0A0A6YYK5 440 aaPredicted RBP23.29■■□□□ 1.32
USF2-216ENST00000607959 ATMINO43313 823 aaPredicted RBP23.29■■□□□ 1.32
USF2-216ENST00000607959 CD19P15391 556 aa23.29■■□□□ 1.32
USF2-216ENST00000607959 EN2P19622 333 aaPredicted RBP23.29■■□□□ 1.32
USF2-216ENST00000607959 LMO2P25791 158 aa23.29■■□□□ 1.32
USF2-216ENST00000607959 NOMO2Q5JPE7 1267 aa23.29■■□□□ 1.32
USF2-216ENST00000607959 DENND1BQ6P3S1 775 aa23.29■■□□□ 1.32
USF2-216ENST00000607959 TTC39CQ8N584 583 aa23.29■■□□□ 1.32
USF2-216ENST00000607959 NT5C1AQ9BXI3 368 aa23.29■■□□□ 1.32
USF2-216ENST00000607959 DPEP3Q9H4B8 488 aa23.29■■□□□ 1.32
USF2-216ENST00000607959 OSGEPQ9NPF4 335 aa23.29■■□□□ 1.32
USF2-216ENST00000607959 CASQ1P31415 396 aa23.28■■□□□ 1.32
USF2-216ENST00000607959 PTP4A2Q12974 167 aa23.28■■□□□ 1.32
USF2-216ENST00000607959 C2CD6Q53TS8 623 aa23.28■■□□□ 1.32
USF2-216ENST00000607959 TRIM72Q6ZMU5 477 aa23.28■■□□□ 1.32
USF2-216ENST00000607959 MCOLN2Q8IZK6 566 aa23.28■■□□□ 1.32
USF2-216ENST00000607959 TOP6BLQ8N6T0 577 aa23.28■■□□□ 1.32
USF2-216ENST00000607959 C12orf29Q8N999 325 aa23.28■■□□□ 1.32
USF2-216ENST00000607959 APPL2Q8NEU8 664 aa23.28■■□□□ 1.32
USF2-216ENST00000607959 SLC35G2Q8TBE7 412 aa23.28■■□□□ 1.32
USF2-216ENST00000607959 CTNNBL1Q8WYA6 563 aaPredicted RBP23.28■■□□□ 1.32
USF2-216ENST00000607959 SENP8Q96LD8 212 aa23.28■■□□□ 1.32
USF2-216ENST00000607959 TBC1D13Q9NVG8 400 aa23.28■■□□□ 1.32
USF2-216ENST00000607959 PCDHGC5Q9Y5F6 944 aa23.28■■□□□ 1.32
USF2-216ENST00000607959 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.28■■□□□ 1.32
USF2-216ENST00000607959 O00370 1275 aa23.27■■□□□ 1.32
USF2-216ENST00000607959 CYB561D2O14569 222 aa23.27■■□□□ 1.32
USF2-216ENST00000607959 ITGB1P05556 798 aa23.27■■□□□ 1.32
USF2-216ENST00000607959 CDH5P33151 784 aaPredicted RBP23.27■■□□□ 1.32
USF2-216ENST00000607959 TIGD5Q53EQ6 642 aa23.27■■□□□ 1.32
USF2-216ENST00000607959 WSCD1Q658N2 575 aa23.27■■□□□ 1.32
USF2-216ENST00000607959 MON1BQ7L1V2 547 aa23.27■■□□□ 1.32
USF2-216ENST00000607959 ACOT1Q86TX2 421 aa23.27■■□□□ 1.32
USF2-216ENST00000607959 RFFLQ8WZ73 363 aa23.27■■□□□ 1.32
USF2-216ENST00000607959 HEXIM2Q96MH2 286 aaKnown RBP23.27■■□□□ 1.32
USF2-216ENST00000607959 CASD1Q96PB1 797 aa23.27■■□□□ 1.32
USF2-216ENST00000607959 NOX5Q96PH1 765 aa23.27■■□□□ 1.32
USF2-216ENST00000607959 CYTH4Q9UIA0 394 aa23.27■■□□□ 1.32
USF2-216ENST00000607959 ALPK3Q96L96 1907 aa23.27■■□□□ 1.32
USF2-216ENST00000607959 GRID2IPA4D2P6 1211 aa23.27■■□□□ 1.32
USF2-216ENST00000607959 KIAA0355O15063 1070 aa23.27■■□□□ 1.32
USF2-216ENST00000607959 VDRP11473 427 aa23.27■■□□□ 1.32
USF2-216ENST00000607959 TCEAL1Q15170 157 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms