RNA–Protein interactions for RNA: ENST00000606878.1

LINC00240-203, long intergenic non-protein coding RNA 240, humanhuman

TSL 1 (best)

Gene LINC00240, Length 927 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00240-203ENST00000606878 LHX1P48742 406 aa17.8■□□□□ 0.44
LINC00240-203ENST00000606878 CASP4P49662 377 aa17.8■□□□□ 0.44
LINC00240-203ENST00000606878 NTHL1P78549 312 aa17.8■□□□□ 0.44
LINC00240-203ENST00000606878 PLD1Q13393 1074 aa17.8■□□□□ 0.44
LINC00240-203ENST00000606878 ADAM9Q13443 819 aa17.8■□□□□ 0.44
LINC00240-203ENST00000606878 NFIL3Q16649 462 aa17.8■□□□□ 0.44
LINC00240-203ENST00000606878 PABPC1LQ4VXU2 614 aaKnown RBP17.8■□□□□ 0.44
LINC00240-203ENST00000606878 ZNF658Q5TYW1 1059 aaPredicted RBP17.8■□□□□ 0.44
LINC00240-203ENST00000606878 GET4Q7L5D6 327 aaPredicted RBP17.8■□□□□ 0.44
LINC00240-203ENST00000606878 PDCL2Q8N4E4 241 aa17.8■□□□□ 0.44
LINC00240-203ENST00000606878 ATAD1Q8NBU5 361 aa17.8■□□□□ 0.44
LINC00240-203ENST00000606878 OR10T2Q8NGX3 314 aa17.8■□□□□ 0.44
LINC00240-203ENST00000606878 SPATA20Q8TB22 786 aa17.8■□□□□ 0.44
LINC00240-203ENST00000606878 SPATA18Q8TC71 538 aa17.8■□□□□ 0.44
LINC00240-203ENST00000606878 MYADMQ96S97 322 aa17.8■□□□□ 0.44
LINC00240-203ENST00000606878 RTP3Q9BQQ7 232 aa17.8■□□□□ 0.44
LINC00240-203ENST00000606878 IGSF9Q9P2J2 1179 aa17.8■□□□□ 0.44
LINC00240-203ENST00000606878 EPS15L1Q9UBC2 864 aa17.8■□□□□ 0.44
LINC00240-203ENST00000606878 HSFX1Q9UBD0 423 aa17.8■□□□□ 0.44
LINC00240-203ENST00000606878 SORCS3Q9UPU3 1222 aa17.8■□□□□ 0.44
LINC00240-203ENST00000606878 SLC27A5Q9Y2P5 690 aa17.8■□□□□ 0.44
LINC00240-203ENST00000606878 C5orf42Q9H799 3197 aa17.8■□□□□ 0.44
LINC00240-203ENST00000606878 SCN1AP35498 2009 aa17.79■□□□□ 0.44
LINC00240-203ENST00000606878 MAPK13O15264 365 aa17.79■□□□□ 0.44
LINC00240-203ENST00000606878 N4BP1O75113 896 aaKnown RBP17.79■□□□□ 0.44
LINC00240-203ENST00000606878 NR2F2P24468 414 aa17.79■□□□□ 0.44
LINC00240-203ENST00000606878 ALDH1A3P47895 512 aa17.79■□□□□ 0.44
LINC00240-203ENST00000606878 TUFMP49411 452 aaKnown RBP17.79■□□□□ 0.44
LINC00240-203ENST00000606878 EPHB3P54753 998 aa17.79■□□□□ 0.44
LINC00240-203ENST00000606878 CLDN10P78369 228 aa17.79■□□□□ 0.44
LINC00240-203ENST00000606878 MYL7Q01449 175 aa17.79■□□□□ 0.44
LINC00240-203ENST00000606878 TSPY1Q01534 308 aa17.79■□□□□ 0.44
LINC00240-203ENST00000606878 TWF1Q12792 350 aa17.79■□□□□ 0.44
LINC00240-203ENST00000606878 SLC39A12Q504Y0 691 aa17.79■□□□□ 0.44
LINC00240-203ENST00000606878 CYP4A22Q5TCH4 519 aa17.79■□□□□ 0.44
LINC00240-203ENST00000606878 SMYD4Q8IYR2 804 aaPredicted RBP17.79■□□□□ 0.44
LINC00240-203ENST00000606878 TMC2Q8TDI7 906 aa17.79■□□□□ 0.44
LINC00240-203ENST00000606878 C2orf15Q8WU43 125 aaKnown RBP17.79■□□□□ 0.44
LINC00240-203ENST00000606878 ERCC4Q92889 916 aaPredicted RBP17.79■□□□□ 0.44
LINC00240-203ENST00000606878 TMEM209Q96SK2 561 aa17.79■□□□□ 0.44
LINC00240-203ENST00000606878 MMS19Q96T76 1030 aa17.79■□□□□ 0.44
LINC00240-203ENST00000606878 ACBD6Q9BR61 282 aa17.79■□□□□ 0.44
LINC00240-203ENST00000606878 CORO1BQ9BR76 489 aa17.79■□□□□ 0.44
LINC00240-203ENST00000606878 HCFC1R1Q9NWW0 138 aa17.79■□□□□ 0.44
LINC00240-203ENST00000606878 DDX43Q9NXZ2 648 aaKnown RBP17.79■□□□□ 0.44
LINC00240-203ENST00000606878 CDH7Q9ULB5 785 aa17.79■□□□□ 0.44
LINC00240-203ENST00000606878 L1RE1Q9UN81 338 aa17.79■□□□□ 0.44
LINC00240-203ENST00000606878 MRPS23Q9Y3D9 190 aaKnown RBP17.79■□□□□ 0.44
LINC00240-203ENST00000606878 MUC3AQ02505 3323 aa17.79■□□□□ 0.44
LINC00240-203ENST00000606878 MYO10Q9HD67 2058 aa17.79■□□□□ 0.44
LINC00240-203ENST00000606878 ANK1P16157 1881 aa17.78■□□□□ 0.44
LINC00240-203ENST00000606878 MTMR11A4FU01 709 aa17.78■□□□□ 0.44
LINC00240-203ENST00000606878 ZNF197O14709 1029 aa17.78■□□□□ 0.44
LINC00240-203ENST00000606878 IKBKBO14920 756 aa17.78■□□□□ 0.44
LINC00240-203ENST00000606878 ASGR2P07307 311 aa17.78■□□□□ 0.44
LINC00240-203ENST00000606878 RHOP08100 348 aa17.78■□□□□ 0.44
LINC00240-203ENST00000606878 FAM163BP0C2L3 166 aa17.78■□□□□ 0.44
LINC00240-203ENST00000606878 ATICP31939 592 aa17.78■□□□□ 0.44
LINC00240-203ENST00000606878 PSMC2P35998 433 aaKnown RBP17.78■□□□□ 0.44
LINC00240-203ENST00000606878 PRCPP42785 496 aa17.78■□□□□ 0.44
LINC00240-203ENST00000606878 UBE2HP62256 183 aa17.78■□□□□ 0.44
LINC00240-203ENST00000606878 BIRC3Q13489 604 aa17.78■□□□□ 0.44
LINC00240-203ENST00000606878 MTMR3Q13615 1198 aa17.78■□□□□ 0.44
LINC00240-203ENST00000606878 SOWAHAQ2M3V2 549 aa17.78■□□□□ 0.44
LINC00240-203ENST00000606878 TRIM67Q6ZTA4 783 aa17.78■□□□□ 0.44
LINC00240-203ENST00000606878 LRRTM3Q86VH5 581 aa17.78■□□□□ 0.44
LINC00240-203ENST00000606878 UBALD2Q8IYN6 164 aa17.78■□□□□ 0.44
LINC00240-203ENST00000606878 NXPE3Q969Y0 559 aa17.78■□□□□ 0.44
LINC00240-203ENST00000606878 LRFN3Q9BTN0 628 aa17.78■□□□□ 0.44
LINC00240-203ENST00000606878 GZF1Q9H116 711 aaPredicted RBP17.78■□□□□ 0.44
LINC00240-203ENST00000606878 KCNK12Q9HB15 430 aa17.78■□□□□ 0.44
LINC00240-203ENST00000606878 AVENQ9NQS1 362 aaPredicted RBP17.78■□□□□ 0.44
LINC00240-203ENST00000606878 LRRIQ3A6PVS8 624 aaPredicted RBP17.77■□□□□ 0.44
LINC00240-203ENST00000606878 VNN2O95498 520 aa17.77■□□□□ 0.44
LINC00240-203ENST00000606878 C4BPAP04003 597 aaKnown RBP17.77■□□□□ 0.44
LINC00240-203ENST00000606878 KRT13P13646 458 aa17.77■□□□□ 0.44
LINC00240-203ENST00000606878 PCSK1P29120 753 aa17.77■□□□□ 0.44
LINC00240-203ENST00000606878 VAMP7P51809 220 aa17.77■□□□□ 0.44
LINC00240-203ENST00000606878 TDGQ13569 410 aa17.77■□□□□ 0.44
LINC00240-203ENST00000606878 NFE2Q16621 373 aaPredicted RBP17.77■□□□□ 0.44
LINC00240-203ENST00000606878 EDRF1Q3B7T1 1238 aa17.77■□□□□ 0.44
LINC00240-203ENST00000606878 WDR72Q3MJ13 1102 aa17.77■□□□□ 0.44
LINC00240-203ENST00000606878 COBLL1Q53SF7 1204 aa17.77■□□□□ 0.44
LINC00240-203ENST00000606878 INTS8Q75QN2 995 aaKnown RBP17.77■□□□□ 0.44
LINC00240-203ENST00000606878 ADGRF2Q8IZF7 708 aa17.77■□□□□ 0.44
LINC00240-203ENST00000606878 LEMD2Q8NC56 503 aa17.77■□□□□ 0.44
LINC00240-203ENST00000606878 ITFG1Q8TB96 612 aa17.77■□□□□ 0.44
LINC00240-203ENST00000606878 PLEKHO2Q8TD55 490 aa17.77■□□□□ 0.44
LINC00240-203ENST00000606878 FGF13Q92913 245 aa17.77■□□□□ 0.44
LINC00240-203ENST00000606878 SYAP1Q96A49 352 aaPredicted RBP17.77■□□□□ 0.44
LINC00240-203ENST00000606878 TSG101Q99816 390 aa17.77■□□□□ 0.44
LINC00240-203ENST00000606878 CEP72Q9P209 647 aa17.77■□□□□ 0.44
LINC00240-203ENST00000606878 YIPF1Q9Y548 306 aa17.77■□□□□ 0.44
LINC00240-203ENST00000606878 ASB3Q9Y575 518 aa17.77■□□□□ 0.44
LINC00240-203ENST00000606878 FAM86C2PA6NEL3 165 aa17.76■□□□□ 0.43
LINC00240-203ENST00000606878 PRR33A8MZF0 331 aa17.76■□□□□ 0.43
LINC00240-203ENST00000606878 GABRDO14764 452 aa17.76■□□□□ 0.43
LINC00240-203ENST00000606878 CETN3O15182 167 aa17.76■□□□□ 0.43
LINC00240-203ENST00000606878 AKAP3O75969 853 aa17.76■□□□□ 0.43
LINC00240-203ENST00000606878 STAU1O95793 577 aaKnown RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms