RNA–Protein interactions for RNA: ENST00000606066.1

CTSA-211, Transcript of cathepsin A, humanhuman

TSL 5

Gene CTSA, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-211ENST00000606066 RPL17P18621 184 aaKnown RBP15.31■□□□□ 0.04
CTSA-211ENST00000606066 OR1D2P34982 312 aa15.31■□□□□ 0.04
CTSA-211ENST00000606066 LTBRP36941 435 aa15.31■□□□□ 0.04
CTSA-211ENST00000606066 CLCN4P51793 760 aa15.31■□□□□ 0.04
CTSA-211ENST00000606066 CETN1Q12798 172 aa15.31■□□□□ 0.04
CTSA-211ENST00000606066 KCNC3Q14003 757 aa15.31■□□□□ 0.04
CTSA-211ENST00000606066 RAB33AQ14088 237 aa15.31■□□□□ 0.04
CTSA-211ENST00000606066 NFKBIBQ15653 356 aa15.31■□□□□ 0.04
CTSA-211ENST00000606066 ZNF699Q32M78 642 aa15.31■□□□□ 0.04
CTSA-211ENST00000606066 WDR72Q3MJ13 1102 aa15.31■□□□□ 0.04
CTSA-211ENST00000606066 ZNF667Q5HYK9 610 aa15.31■□□□□ 0.04
CTSA-211ENST00000606066 LLGL2Q6P1M3 1020 aa15.31■□□□□ 0.04
CTSA-211ENST00000606066 PALB2Q86YC2 1186 aa15.31■□□□□ 0.04
CTSA-211ENST00000606066 CREBRFQ8IUR6 639 aa15.31■□□□□ 0.04
CTSA-211ENST00000606066 ADHFE1Q8IWW8 467 aa15.31■□□□□ 0.04
CTSA-211ENST00000606066 SLC22A17Q8WUG5 538 aa15.31■□□□□ 0.04
CTSA-211ENST00000606066 HDAC7Q8WUI4 952 aa15.31■□□□□ 0.04
CTSA-211ENST00000606066 SLC35C1Q96A29 364 aa15.31■□□□□ 0.04
CTSA-211ENST00000606066 MED15Q96RN5 788 aa15.31■□□□□ 0.04
CTSA-211ENST00000606066 MMS19Q96T76 1030 aa15.31■□□□□ 0.04
CTSA-211ENST00000606066 DZANK1Q9NVP4 752 aa15.31■□□□□ 0.04
CTSA-211ENST00000606066 FBXL5Q9UKA1 691 aa15.31■□□□□ 0.04
CTSA-211ENST00000606066 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.31■□□□□ 0.04
CTSA-211ENST00000606066 SPDYE4A6NLX3 237 aa15.3■□□□□ 0.04
CTSA-211ENST00000606066 LINC01565O15544 149 aa15.3■□□□□ 0.04
CTSA-211ENST00000606066 TGM5O43548 720 aa15.3■□□□□ 0.04
CTSA-211ENST00000606066 TBC1D4O60343 1298 aa15.3■□□□□ 0.04
CTSA-211ENST00000606066 VNN1O95497 513 aa15.3■□□□□ 0.04
CTSA-211ENST00000606066 HLA-DRAP01903 254 aa15.3■□□□□ 0.04
CTSA-211ENST00000606066 HOXB8P17481 243 aaPredicted RBP15.3■□□□□ 0.04
CTSA-211ENST00000606066 LHX1P48742 406 aa15.3■□□□□ 0.04
CTSA-211ENST00000606066 MYL7Q01449 175 aa15.3■□□□□ 0.04
CTSA-211ENST00000606066 PDCD11Q14690 1871 aaKnown RBP15.3■□□□□ 0.04
CTSA-211ENST00000606066 TRIP11Q15643 1979 aa15.3■□□□□ 0.04
CTSA-211ENST00000606066 WSCD1Q658N2 575 aa15.3■□□□□ 0.04
CTSA-211ENST00000606066 SCARA3Q6AZY7 606 aa15.3■□□□□ 0.04
CTSA-211ENST00000606066 ALYREFQ86V81 257 aaKnown RBP15.3■□□□□ 0.04
CTSA-211ENST00000606066 GLYCTKQ8IVS8 523 aa15.3■□□□□ 0.04
CTSA-211ENST00000606066 TRIM59Q8IWR1 403 aa15.3■□□□□ 0.04
CTSA-211ENST00000606066 PDCL2Q8N4E4 241 aa15.3■□□□□ 0.04
CTSA-211ENST00000606066 FBXL13Q8NEE6 735 aa15.3■□□□□ 0.04
CTSA-211ENST00000606066 TAS1R2Q8TE23 839 aa15.3■□□□□ 0.04
CTSA-211ENST00000606066 CNOT6LQ96LI5 555 aaKnown RBP15.3■□□□□ 0.04
CTSA-211ENST00000606066 XYLT2Q9H1B5 865 aa15.3■□□□□ 0.04
CTSA-211ENST00000606066 PLEKHA4Q9H4M7 779 aa15.3■□□□□ 0.04
CTSA-211ENST00000606066 RAB20Q9NX57 234 aa15.3■□□□□ 0.04
CTSA-211ENST00000606066 NXF1Q9UBU9 619 aaKnown RBP15.3■□□□□ 0.04
CTSA-211ENST00000606066 L1RE1Q9UN81 338 aa15.3■□□□□ 0.04
CTSA-211ENST00000606066 TRIOO75962 3097 aa15.3■□□□□ 0.04
CTSA-211ENST00000606066 PMM2O15305 246 aa15.29■□□□□ 0.04
CTSA-211ENST00000606066 P4HA2O15460 535 aa15.29■□□□□ 0.04
CTSA-211ENST00000606066 GLP2RO95838 553 aa15.29■□□□□ 0.04
CTSA-211ENST00000606066 ASS1P00966 412 aaKnown RBP15.29■□□□□ 0.04
CTSA-211ENST00000606066 EPCAMP16422 314 aa15.29■□□□□ 0.04
CTSA-211ENST00000606066 ARPP19P56211 112 aa15.29■□□□□ 0.04
CTSA-211ENST00000606066 SMAD2Q15796 467 aaKnown RBP15.29■□□□□ 0.04
CTSA-211ENST00000606066 SOWAHAQ2M3V2 549 aa15.29■□□□□ 0.04
CTSA-211ENST00000606066 WDR44Q5JSH3 913 aa15.29■□□□□ 0.04
CTSA-211ENST00000606066 TPGS2Q68CL5 300 aa15.29■□□□□ 0.04
CTSA-211ENST00000606066 LILRA6Q6PI73 481 aa15.29■□□□□ 0.04
CTSA-211ENST00000606066 RSPO2Q6UXX9 243 aaPredicted RBP15.29■□□□□ 0.04
CTSA-211ENST00000606066 ADGRF2Q8IZF7 708 aa15.29■□□□□ 0.04
CTSA-211ENST00000606066 ZNF461Q8TAF7 563 aa15.29■□□□□ 0.04
CTSA-211ENST00000606066 DNAJC25Q9H1X3 360 aa15.29■□□□□ 0.04
CTSA-211ENST00000606066 MAFFQ9ULX9 164 aa15.29■□□□□ 0.04
CTSA-211ENST00000606066 NFE2L3Q9Y4A8 694 aa15.29■□□□□ 0.04
CTSA-211ENST00000606066 WDFY4Q6ZS81 3184 aa15.29■□□□□ 0.04
CTSA-211ENST00000606066 ANK1P16157 1881 aa15.29■□□□□ 0.04
CTSA-211ENST00000606066 SYCE3A1L190 88 aa15.28■□□□□ 0.04
CTSA-211ENST00000606066 ADAM12O43184 909 aa15.28■□□□□ 0.04
CTSA-211ENST00000606066 TACC1O75410 805 aa15.28■□□□□ 0.04
CTSA-211ENST00000606066 AFPP02771 609 aaKnown RBP15.28■□□□□ 0.04
CTSA-211ENST00000606066 PRKCSHP14314 528 aaPredicted RBP15.28■□□□□ 0.04
CTSA-211ENST00000606066 CPB1P15086 417 aa15.28■□□□□ 0.04
CTSA-211ENST00000606066 PCSK1P29120 753 aa15.28■□□□□ 0.04
CTSA-211ENST00000606066 ELF1P32519 619 aa15.28■□□□□ 0.04
CTSA-211ENST00000606066 MTIF2P46199 727 aaKnown RBP15.28■□□□□ 0.04
CTSA-211ENST00000606066 FMO5P49326 533 aa15.28■□□□□ 0.04
CTSA-211ENST00000606066 TSPY1Q01534 308 aa15.28■□□□□ 0.04
CTSA-211ENST00000606066 ROR1Q01973 937 aa15.28■□□□□ 0.04
CTSA-211ENST00000606066 MYL5Q02045 173 aa15.28■□□□□ 0.04
CTSA-211ENST00000606066 KCNH2Q12809 1159 aa15.28■□□□□ 0.04
CTSA-211ENST00000606066 SMARCB1Q12824 385 aa15.28■□□□□ 0.04
CTSA-211ENST00000606066 CBWD6Q4V339 395 aa15.28■□□□□ 0.04
CTSA-211ENST00000606066 CBWD3Q5JTY5 395 aa15.28■□□□□ 0.04
CTSA-211ENST00000606066 CBWD5Q5RIA9 395 aa15.28■□□□□ 0.04
CTSA-211ENST00000606066 LIN9Q5TKA1 542 aa15.28■□□□□ 0.04
CTSA-211ENST00000606066 ANKRD54Q6NXT1 300 aa15.28■□□□□ 0.04
CTSA-211ENST00000606066 C11orf57Q6ZUT1 292 aaPredicted RBP15.28■□□□□ 0.04
CTSA-211ENST00000606066 RTL10Q7L3V2 364 aa15.28■□□□□ 0.04
CTSA-211ENST00000606066 LIMS2Q7Z4I7 341 aa15.28■□□□□ 0.04
CTSA-211ENST00000606066 DCP1BQ8IZD4 617 aaKnown RBP15.28■□□□□ 0.04
CTSA-211ENST00000606066 KREMEN2Q8NCW0 462 aa15.28■□□□□ 0.04
CTSA-211ENST00000606066 VN1R2Q8NFZ6 395 aa15.28■□□□□ 0.04
CTSA-211ENST00000606066 FAXDC2Q96IV6 333 aa15.28■□□□□ 0.04
CTSA-211ENST00000606066 ACBD6Q9BR61 282 aa15.28■□□□□ 0.04
CTSA-211ENST00000606066 SNX25Q9H3E2 840 aa15.28■□□□□ 0.04
CTSA-211ENST00000606066 MAN1C1Q9NR34 630 aa15.28■□□□□ 0.04
CTSA-211ENST00000606066 DDX43Q9NXZ2 648 aaKnown RBP15.28■□□□□ 0.04
CTSA-211ENST00000606066 CLEC1BQ9P126 229 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms