RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 MMP1P03956 469 aa4.36□□□□□ -1.71
HMGB1P50-201ENST00000605814 CHGBP05060 677 aa4.36□□□□□ -1.71
HMGB1P50-201ENST00000605814 ALDH2P05091 517 aa4.36□□□□□ -1.71
HMGB1P50-201ENST00000605814 ZNF24P17028 368 aa4.36□□□□□ -1.71
HMGB1P50-201ENST00000605814 SMARCA1P28370 1054 aa4.36□□□□□ -1.71
HMGB1P50-201ENST00000605814 CDC25AP30304 524 aa4.36□□□□□ -1.71
HMGB1P50-201ENST00000605814 CTNNA1P35221 906 aaKnown RBP4.36□□□□□ -1.71
HMGB1P50-201ENST00000605814 CCT6AP40227 531 aaKnown RBP4.36□□□□□ -1.71
HMGB1P50-201ENST00000605814 VHLP40337 213 aa4.36□□□□□ -1.71
HMGB1P50-201ENST00000605814 MAGEA1P43355 309 aa4.36□□□□□ -1.71
HMGB1P50-201ENST00000605814 RFX5P48382 616 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P50-201ENST00000605814 ACADVLP49748 655 aa4.36□□□□□ -1.71
HMGB1P50-201ENST00000605814 MAGOHP61326 146 aaKnown RBP4.36□□□□□ -1.71
HMGB1P50-201ENST00000605814 MPP3Q13368 585 aa4.36□□□□□ -1.71
HMGB1P50-201ENST00000605814 LAPTM5Q13571 262 aa4.36□□□□□ -1.71
HMGB1P50-201ENST00000605814 MPP2Q14168 576 aa4.36□□□□□ -1.71
HMGB1P50-201ENST00000605814 ALX1Q15699 326 aa4.36□□□□□ -1.71
HMGB1P50-201ENST00000605814 NAB2Q15742 525 aa4.36□□□□□ -1.71
HMGB1P50-201ENST00000605814 CLUL1Q15846 466 aa4.36□□□□□ -1.71
HMGB1P50-201ENST00000605814 CLPPQ16740 277 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P50-201ENST00000605814 RABL6Q3YEC7 729 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P50-201ENST00000605814 TNNI3KQ59H18 835 aa4.36□□□□□ -1.71
HMGB1P50-201ENST00000605814 ARSHQ5FYA8 562 aa4.36□□□□□ -1.71
HMGB1P50-201ENST00000605814 MFSD5Q6N075 450 aa4.36□□□□□ -1.71
HMGB1P50-201ENST00000605814 KLC3Q6P597 504 aa4.36□□□□□ -1.71
HMGB1P50-201ENST00000605814 PASD1Q8IV76 773 aa4.36□□□□□ -1.71
HMGB1P50-201ENST00000605814 NELFCDQ8IXH7 590 aa4.36□□□□□ -1.71
HMGB1P50-201ENST00000605814 RNF168Q8IYW5 571 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P50-201ENST00000605814 LRRC34Q8IZ02 419 aa4.36□□□□□ -1.71
HMGB1P50-201ENST00000605814 SPICE1Q8N0Z3 855 aa4.36□□□□□ -1.71
HMGB1P50-201ENST00000605814 NLGN1Q8N2Q7 840 aa4.36□□□□□ -1.71
HMGB1P50-201ENST00000605814 SDR16C5Q8N3Y7 309 aa4.36□□□□□ -1.71
HMGB1P50-201ENST00000605814 RASGEF1CQ8N431 466 aa4.36□□□□□ -1.71
HMGB1P50-201ENST00000605814 USHBP1Q8N6Y0 703 aa4.36□□□□□ -1.71
HMGB1P50-201ENST00000605814 NUP43Q8NFH3 380 aa4.36□□□□□ -1.71
HMGB1P50-201ENST00000605814 PIP4K2CQ8TBX8 421 aa4.36□□□□□ -1.71
HMGB1P50-201ENST00000605814 IFT81Q8WYA0 676 aa4.36□□□□□ -1.71
HMGB1P50-201ENST00000605814 MAGOHBQ96A72 148 aaKnown RBP4.36□□□□□ -1.71
HMGB1P50-201ENST00000605814 ZNF653Q96CK0 615 aa4.36□□□□□ -1.71
HMGB1P50-201ENST00000605814 HHIPL1Q96JK4 782 aa4.36□□□□□ -1.71
HMGB1P50-201ENST00000605814 FCRL2Q96LA5 508 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P50-201ENST00000605814 OLFM3Q96PB7 478 aa4.36□□□□□ -1.71
HMGB1P50-201ENST00000605814 NAP1L3Q99457 506 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P50-201ENST00000605814 ELAC2Q9BQ52 826 aaKnown RBP4.36□□□□□ -1.71
HMGB1P50-201ENST00000605814 BDH2Q9BUT1 245 aa4.36□□□□□ -1.71
HMGB1P50-201ENST00000605814 SPATA16Q9BXB7 569 aa4.36□□□□□ -1.71
HMGB1P50-201ENST00000605814 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.36□□□□□ -1.71
HMGB1P50-201ENST00000605814 LRMDAQ9H2I8 198 aa4.36□□□□□ -1.71
HMGB1P50-201ENST00000605814 CNTD2Q9H8S5 307 aa4.36□□□□□ -1.71
HMGB1P50-201ENST00000605814 PREBQ9HCU5 417 aa4.36□□□□□ -1.71
HMGB1P50-201ENST00000605814 SAR1AQ9NR31 198 aa4.36□□□□□ -1.71
HMGB1P50-201ENST00000605814 TXLNGQ9NUQ3 528 aa4.36□□□□□ -1.71
HMGB1P50-201ENST00000605814 TUBA8Q9NY65 449 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P50-201ENST00000605814 SPATA7Q9P0W8 599 aa4.36□□□□□ -1.71
HMGB1P50-201ENST00000605814 DLGAP2Q9P1A6 1054 aa4.36□□□□□ -1.71
HMGB1P50-201ENST00000605814 TNFRSF10DQ9UBN6 386 aa4.36□□□□□ -1.71
HMGB1P50-201ENST00000605814 DNAJB4Q9UDY4 337 aa4.36□□□□□ -1.71
HMGB1P50-201ENST00000605814 TUBGCP4Q9UGJ1 667 aa4.36□□□□□ -1.71
HMGB1P50-201ENST00000605814 PARP2Q9UGN5 583 aa4.36□□□□□ -1.71
HMGB1P50-201ENST00000605814 SEC63Q9UGP8 760 aaKnown RBP4.36□□□□□ -1.71
HMGB1P50-201ENST00000605814 DBNLQ9UJU6 430 aaKnown RBP4.36□□□□□ -1.71
HMGB1P50-201ENST00000605814 BARX2Q9UMQ3 279 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P50-201ENST00000605814 STXBP5LQ9Y2K9 1186 aa4.36□□□□□ -1.71
HMGB1P50-201ENST00000605814 ATP8A1Q9Y2Q0 1164 aa4.36□□□□□ -1.71
HMGB1P50-201ENST00000605814 GPR55Q9Y2T6 319 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P50-201ENST00000605814 TMED5Q9Y3A6 229 aa4.36□□□□□ -1.71
HMGB1P50-201ENST00000605814 BZW2Q9Y6E2 419 aaKnown RBP4.36□□□□□ -1.71
HMGB1P50-201ENST00000605814 DUSP10Q9Y6W6 482 aa4.36□□□□□ -1.71
HMGB1P50-201ENST00000605814 FPGT-TNNI3KV9GXZ4 949 aa4.36□□□□□ -1.71
HMGB1P50-201ENST00000605814 ECM29Q5VYK3 1845 aa4.36□□□□□ -1.71
HMGB1P50-201ENST00000605814 MAP3K19Q56UN5 1328 aa4.36□□□□□ -1.71
HMGB1P50-201ENST00000605814 CHD1O14646 1710 aa4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 MYH4Q9Y623 1939 aa4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 A0A1B0GVG6 124 aa4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 GOLGA8AA7E2F4 631 aa4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 MINDY4BA8MYZ0 360 aa4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 RGS13O14921 159 aa4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 NVLO15381 856 aaKnown RBP4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 RAD51CO43502 376 aa4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 AP1G1O43747 822 aa4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 RANBP6O60518 1105 aaKnown RBP4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 ATP6V1G1O75348 118 aa4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 TCEA3O75764 348 aa4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 TJP3O95049 919 aa4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 PRAMEF1O95521 474 aa4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 A1BGP04217 495 aa4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 ASLP04424 464 aa4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 ZBTB48P10074 688 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 CHN1P15882 459 aa4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 PRKCAP17252 672 aa4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 PFKLP17858 780 aa4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 IBSPP21815 317 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 ANXA13P27216 316 aa4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 HPDP32754 393 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 GJA8P48165 433 aa4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 TUBP50607 506 aa4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 SLC18A1P54219 525 aa4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 CACNA2D1P54289 1103 aa4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 RAD23BP54727 409 aa4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 NPEPPSP55786 919 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms