RNA–Protein interactions for RNA: ENST00000604599.1

CDCA3-212, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 2,917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-212ENST00000604599 MAP7Q14244 749 aa13.1□□□□□ -0.31
CDCA3-212ENST00000604599 SLC15A2Q16348 729 aa13.1□□□□□ -0.31
CDCA3-212ENST00000604599 USH1GQ495M9 461 aa13.1□□□□□ -0.31
CDCA3-212ENST00000604599 BRINP3Q76B58 766 aa13.1□□□□□ -0.31
CDCA3-212ENST00000604599 RASSF3Q86WH2 238 aa13.1□□□□□ -0.31
CDCA3-212ENST00000604599 NME8Q8N427 588 aa13.1□□□□□ -0.31
CDCA3-212ENST00000604599 SMC1BQ8NDV3 1235 aa13.1□□□□□ -0.31
CDCA3-212ENST00000604599 TTC17Q96AE7 1141 aa13.1□□□□□ -0.31
CDCA3-212ENST00000604599 CBWD1Q9BRT8 395 aa13.1□□□□□ -0.31
CDCA3-212ENST00000604599 CHMP2BQ9UQN3 213 aa13.1□□□□□ -0.31
CDCA3-212ENST00000604599 ASLP04424 464 aa13.1□□□□□ -0.31
CDCA3-212ENST00000604599 ITGA2BP08514 1039 aa13.1□□□□□ -0.31
CDCA3-212ENST00000604599 PABPC4LP0CB38 370 aaKnown RBP13.1□□□□□ -0.31
CDCA3-212ENST00000604599 SLURP2P0DP57 97 aa13.1□□□□□ -0.31
CDCA3-212ENST00000604599 SSTR1P30872 391 aa13.1□□□□□ -0.31
CDCA3-212ENST00000604599 MXI1P50539 228 aa13.1□□□□□ -0.31
CDCA3-212ENST00000604599 RAP1GDS1P52306 607 aa13.1□□□□□ -0.31
CDCA3-212ENST00000604599 RHBDL3P58872 404 aa13.1□□□□□ -0.31
CDCA3-212ENST00000604599 TTLL12Q14166 644 aaPredicted RBP13.1□□□□□ -0.31
CDCA3-212ENST00000604599 KRT72Q14CN4 511 aa13.1□□□□□ -0.31
CDCA3-212ENST00000604599 ZFYVE27Q5T4F4 411 aa13.1□□□□□ -0.31
CDCA3-212ENST00000604599 C6orf163Q5TEZ5 329 aa13.1□□□□□ -0.31
CDCA3-212ENST00000604599 ISLR2Q6UXK2 745 aa13.1□□□□□ -0.31
CDCA3-212ENST00000604599 TREML1Q86YW5 311 aa13.1□□□□□ -0.31
CDCA3-212ENST00000604599 ULK2Q8IYT8 1036 aa13.1□□□□□ -0.31
CDCA3-212ENST00000604599 STKLD1Q8NE28 680 aa13.1□□□□□ -0.31
CDCA3-212ENST00000604599 SHKBP1Q8TBC3 707 aa13.1□□□□□ -0.31
CDCA3-212ENST00000604599 PLEKHO2Q8TD55 490 aa13.1□□□□□ -0.31
CDCA3-212ENST00000604599 CCDC28BQ9BUN5 200 aa13.1□□□□□ -0.31
CDCA3-212ENST00000604599 BTG4Q9NY30 223 aa13.1□□□□□ -0.31
CDCA3-212ENST00000604599 IL1RAPL1Q9NZN1 696 aa13.1□□□□□ -0.31
CDCA3-212ENST00000604599 SLC7A8Q9UHI5 535 aa13.1□□□□□ -0.31
CDCA3-212ENST00000604599 ZNF148Q9UQR1 794 aa13.1□□□□□ -0.31
CDCA3-212ENST00000604599 USTQ9Y2C2 406 aa13.1□□□□□ -0.31
CDCA3-212ENST00000604599 IRS2Q9Y4H2 1338 aa13.1□□□□□ -0.31
CDCA3-212ENST00000604599 F8W8V4 182 aa13.09□□□□□ -0.31
CDCA3-212ENST00000604599 PGM3O95394 542 aa13.09□□□□□ -0.31
CDCA3-212ENST00000604599 FAM163BP0C2L3 166 aa13.09□□□□□ -0.31
CDCA3-212ENST00000604599 EEF2P13639 858 aaKnown RBP13.09□□□□□ -0.31
CDCA3-212ENST00000604599 BGNP21810 368 aa13.09□□□□□ -0.31
CDCA3-212ENST00000604599 SLC1A1P43005 524 aa13.09□□□□□ -0.31
CDCA3-212ENST00000604599 GEMIN4P57678 1058 aaKnown RBP13.09□□□□□ -0.31
CDCA3-212ENST00000604599 TFDP1Q14186 410 aa13.09□□□□□ -0.31
CDCA3-212ENST00000604599 DDB1Q16531 1140 aa13.09□□□□□ -0.31
CDCA3-212ENST00000604599 TBC1D10BQ4KMP7 808 aaPredicted RBP13.09□□□□□ -0.31
CDCA3-212ENST00000604599 EAPPQ56P03 285 aaPredicted RBP13.09□□□□□ -0.31
CDCA3-212ENST00000604599 C1orf220Q5T0J3 134 aa13.09□□□□□ -0.31
CDCA3-212ENST00000604599 ACAD10Q6JQN1 1059 aa13.09□□□□□ -0.31
CDCA3-212ENST00000604599 DPY19L2Q6NUT2 758 aa13.09□□□□□ -0.31
CDCA3-212ENST00000604599 STXBP4Q6ZWJ1 553 aa13.09□□□□□ -0.31
CDCA3-212ENST00000604599 ACAD11Q709F0 780 aa13.09□□□□□ -0.31
CDCA3-212ENST00000604599 OR6Y1Q8NGX8 325 aa13.09□□□□□ -0.31
CDCA3-212ENST00000604599 IWS1Q96ST2 819 aa13.09□□□□□ -0.31
CDCA3-212ENST00000604599 POLR3CQ9BUI4 534 aaPredicted RBP13.09□□□□□ -0.31
CDCA3-212ENST00000604599 RANBP17Q9H2T7 1088 aaKnown RBP13.09□□□□□ -0.31
CDCA3-212ENST00000604599 PICK1Q9NRD5 415 aa13.09□□□□□ -0.31
CDCA3-212ENST00000604599 DNPEPQ9ULA0 475 aa13.09□□□□□ -0.31
CDCA3-212ENST00000604599 TBC1D30Q9Y2I9 924 aa13.09□□□□□ -0.31
CDCA3-212ENST00000604599 E5RJQ4 531 aa13.09□□□□□ -0.31
CDCA3-212ENST00000604599 PI4K2BG5E9Z4 385 aa13.09□□□□□ -0.31
CDCA3-212ENST00000604599 TBX3O15119 743 aa13.09□□□□□ -0.31
CDCA3-212ENST00000604599 KRT10P13645 584 aa13.09□□□□□ -0.31
CDCA3-212ENST00000604599 HOXA13P31271 388 aaPredicted RBP13.09□□□□□ -0.31
CDCA3-212ENST00000604599 ZNF76P36508 570 aa13.09□□□□□ -0.31
CDCA3-212ENST00000604599 GAD2Q05329 585 aa13.09□□□□□ -0.31
CDCA3-212ENST00000604599 MTMR2Q13614 643 aa13.09□□□□□ -0.31
CDCA3-212ENST00000604599 TRMT5Q32P41 509 aaKnown RBP13.09□□□□□ -0.31
CDCA3-212ENST00000604599 Q4G0T1 1027 aa13.09□□□□□ -0.31
CDCA3-212ENST00000604599 GPATCH4Q5T3I0 446 aaKnown RBP13.09□□□□□ -0.31
CDCA3-212ENST00000604599 SYDE2Q5VT97 1194 aa13.09□□□□□ -0.31
CDCA3-212ENST00000604599 MYLK4Q86YV6 388 aaPredicted RBP13.09□□□□□ -0.31
CDCA3-212ENST00000604599 CRYGNQ8WXF5 182 aa13.09□□□□□ -0.31
CDCA3-212ENST00000604599 LENG1Q96BZ8 264 aaPredicted RBP13.09□□□□□ -0.31
CDCA3-212ENST00000604599 FAM20AQ96MK3 541 aa13.09□□□□□ -0.31
CDCA3-212ENST00000604599 PAFAH2Q99487 392 aa13.09□□□□□ -0.31
CDCA3-212ENST00000604599 MIS12Q9H081 205 aa13.09□□□□□ -0.31
CDCA3-212ENST00000604599 HSFX1Q9UBD0 423 aa13.09□□□□□ -0.31
CDCA3-212ENST00000604599 SLC24A2Q9UI40 661 aa13.09□□□□□ -0.31
CDCA3-212ENST00000604599 KAT6AQ92794 2004 aa13.09□□□□□ -0.31
CDCA3-212ENST00000604599 K7ENM7 598 aa13.09□□□□□ -0.31
CDCA3-212ENST00000604599 ZNF862O60290 1169 aa13.09□□□□□ -0.31
CDCA3-212ENST00000604599 MAGEC1O60732 1142 aa13.09□□□□□ -0.31
CDCA3-212ENST00000604599 TAS2R40P59535 323 aa13.09□□□□□ -0.31
CDCA3-212ENST00000604599 GPX6P59796 221 aa13.09□□□□□ -0.31
CDCA3-212ENST00000604599 ACTR3P61158 418 aa13.09□□□□□ -0.31
CDCA3-212ENST00000604599 LPCAT4Q643R3 524 aa13.09□□□□□ -0.31
CDCA3-212ENST00000604599 MOXD1Q6UVY6 613 aa13.09□□□□□ -0.31
CDCA3-212ENST00000604599 NET1Q7Z628 596 aaPredicted RBP13.09□□□□□ -0.31
CDCA3-212ENST00000604599 TMPRSS6Q8IU80 811 aa13.09□□□□□ -0.31
CDCA3-212ENST00000604599 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.09□□□□□ -0.31
CDCA3-212ENST00000604599 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.09□□□□□ -0.31
CDCA3-212ENST00000604599 PYDC1Q8WXC3 89 aa13.09□□□□□ -0.31
CDCA3-212ENST00000604599 CPA5Q8WXQ8 436 aa13.09□□□□□ -0.31
CDCA3-212ENST00000604599 SHC3Q92529 594 aa13.09□□□□□ -0.31
CDCA3-212ENST00000604599 SEMA4DQ92854 862 aa13.09□□□□□ -0.31
CDCA3-212ENST00000604599 HAUS1Q96CS2 278 aa13.09□□□□□ -0.31
CDCA3-212ENST00000604599 MTBPQ96DY7 904 aa13.09□□□□□ -0.31
CDCA3-212ENST00000604599 FAM111AQ96PZ2 611 aa13.09□□□□□ -0.31
CDCA3-212ENST00000604599 VPS11Q9H270 941 aa13.09□□□□□ -0.31
CDCA3-212ENST00000604599 GOLGA8IPA6NC78 632 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms