RNA–Protein interactions for RNA: ENST00000604030.6

SH3D19-211, Transcript of SH3 domain containing 19, humanhuman

TSL 5 BASIC

Gene SH3D19, Length 5,228 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-211ENST00000604030 TEX13BQ9BXU2 312 aa22.02■■□□□ 1.12
SH3D19-211ENST00000604030 CELF4Q9BZC1 486 aaKnown RBP22.02■■□□□ 1.12
SH3D19-211ENST00000604030 C10orf88Q9H8K7 445 aa22.02■■□□□ 1.12
SH3D19-211ENST00000604030 DSG1Q02413 1049 aa22.02■■□□□ 1.12
SH3D19-211ENST00000604030 MTFR1Q15390 333 aa22.02■■□□□ 1.12
SH3D19-211ENST00000604030 CLEC4FQ8N1N0 589 aa22.02■■□□□ 1.12
SH3D19-211ENST00000604030 RAB42Q8N4Z0 105 aa22.02■■□□□ 1.12
SH3D19-211ENST00000604030 AFG1LQ8WV93 481 aa22.02■■□□□ 1.12
SH3D19-211ENST00000604030 RBBP8Q99708 897 aa22.02■■□□□ 1.12
SH3D19-211ENST00000604030 MXRA8Q9BRK3 442 aa22.02■■□□□ 1.12
SH3D19-211ENST00000604030 ASCC2Q9H1I8 757 aaPredicted RBP22.02■■□□□ 1.12
SH3D19-211ENST00000604030 SCN3BQ9NY72 215 aa22.02■■□□□ 1.12
SH3D19-211ENST00000604030 TJP2Q9UDY2 1190 aa22.02■■□□□ 1.12
SH3D19-211ENST00000604030 CDV3Q9UKY7 258 aaKnown RBP22.02■■□□□ 1.12
SH3D19-211ENST00000604030 GAS2O43903 313 aaKnown RBP22.02■■□□□ 1.12
SH3D19-211ENST00000604030 TAGAPQ8N103 731 aa22.02■■□□□ 1.12
SH3D19-211ENST00000604030 PCDHB8Q9UN66 801 aa22.02■■□□□ 1.12
SH3D19-211ENST00000604030 A0A1B0GW55 424 aa22.02■■□□□ 1.11
SH3D19-211ENST00000604030 C19orf81C9J6K1 198 aa22.02■■□□□ 1.11
SH3D19-211ENST00000604030 EEF2KO00418 725 aaKnown RBP22.02■■□□□ 1.11
SH3D19-211ENST00000604030 BNIP3LO60238 219 aa22.02■■□□□ 1.11
SH3D19-211ENST00000604030 DUX4L2P0CJ85 424 aa22.02■■□□□ 1.11
SH3D19-211ENST00000604030 DUX4L3P0CJ86 424 aa22.02■■□□□ 1.11
SH3D19-211ENST00000604030 DUX4L4P0CJ87 422 aa22.02■■□□□ 1.11
SH3D19-211ENST00000604030 DUX4L5P0CJ88 424 aa22.02■■□□□ 1.11
SH3D19-211ENST00000604030 DUX4L6P0CJ89 424 aa22.02■■□□□ 1.11
SH3D19-211ENST00000604030 DUX4L7P0CJ90 424 aa22.02■■□□□ 1.11
SH3D19-211ENST00000604030 CNTFP26441 200 aa22.02■■□□□ 1.11
SH3D19-211ENST00000604030 MYBPC2Q14324 1141 aa22.02■■□□□ 1.11
SH3D19-211ENST00000604030 EMC2Q15006 297 aa22.02■■□□□ 1.11
SH3D19-211ENST00000604030 RBM46Q8TBY0 533 aaKnown RBP22.02■■□□□ 1.11
SH3D19-211ENST00000604030 SIK2Q9H0K1 926 aa22.02■■□□□ 1.11
SH3D19-211ENST00000604030 DDX28Q9NUL7 540 aaKnown RBP22.02■■□□□ 1.11
SH3D19-211ENST00000604030 DUX4Q9UBX2 424 aa22.02■■□□□ 1.11
SH3D19-211ENST00000604030 TRAPPC3O43617 180 aa22.01■■□□□ 1.11
SH3D19-211ENST00000604030 HIST1H2AGP0C0S8 130 aaPredicted RBP22.01■■□□□ 1.11
SH3D19-211ENST00000604030 HIST1H2ADP20671 130 aa22.01■■□□□ 1.11
SH3D19-211ENST00000604030 MRPS15P82914 257 aaKnown RBP22.01■■□□□ 1.11
SH3D19-211ENST00000604030 MCL1Q07820 350 aa22.01■■□□□ 1.11
SH3D19-211ENST00000604030 TRIM69Q86WT6 500 aa22.01■■□□□ 1.11
SH3D19-211ENST00000604030 DDX42Q86XP3 938 aaKnown RBP eCLIP22.01■■□□□ 1.11
SH3D19-211ENST00000604030 HIST1H2AHQ96KK5 128 aa22.01■■□□□ 1.11
SH3D19-211ENST00000604030 HIST1H2AJQ99878 128 aa22.01■■□□□ 1.11
SH3D19-211ENST00000604030 H2AFJQ9BTM1 129 aa22.01■■□□□ 1.11
SH3D19-211ENST00000604030 MAP3K20Q9NYL2 800 aaKnown RBP22.01■■□□□ 1.11
SH3D19-211ENST00000604030 CDR2LQ86X02 465 aaPredicted RBP22.01■■□□□ 1.11
SH3D19-211ENST00000604030 ARHGEF1Q92888 912 aaKnown RBP22.01■■□□□ 1.11
SH3D19-211ENST00000604030 RPAP3Q9H6T3 665 aaPredicted RBP22.01■■□□□ 1.11
SH3D19-211ENST00000604030 DCLRE1BQ9H816 532 aa22.01■■□□□ 1.11
SH3D19-211ENST00000604030 VPS9D1Q9Y2B5 631 aa22.01■■□□□ 1.11
SH3D19-211ENST00000604030 C21orf2O43822 256 aa22.01■■□□□ 1.11
SH3D19-211ENST00000604030 CDKAL1Q5VV42 579 aa22.01■■□□□ 1.11
SH3D19-211ENST00000604030 CCDC126Q96EE4 140 aa22.01■■□□□ 1.11
SH3D19-211ENST00000604030 ELMO2Q96JJ3 720 aa22.01■■□□□ 1.11
SH3D19-211ENST00000604030 KLHL11Q9NVR0 708 aa22.01■■□□□ 1.11
SH3D19-211ENST00000604030 SLC24A2Q9UI40 661 aa22.01■■□□□ 1.11
SH3D19-211ENST00000604030 SERPINB3P29508 390 aa22.01■■□□□ 1.11
SH3D19-211ENST00000604030 ATP6V1E1P36543 226 aa22.01■■□□□ 1.11
SH3D19-211ENST00000604030 SPON2Q9BUD6 331 aa22.01■■□□□ 1.11
SH3D19-211ENST00000604030 PHTF1Q9UMS5 762 aa22.01■■□□□ 1.11
SH3D19-211ENST00000604030 FAM32AQ9Y421 112 aaKnown RBP22.01■■□□□ 1.11
SH3D19-211ENST00000604030 AP4S1Q9Y587 144 aa22.01■■□□□ 1.11
SH3D19-211ENST00000604030 KANSL1LA0AUZ9 987 aa22■■□□□ 1.11
SH3D19-211ENST00000604030 COG2Q14746 738 aa22■■□□□ 1.11
SH3D19-211ENST00000604030 KIAA2013Q8IYS2 634 aa22■■□□□ 1.11
SH3D19-211ENST00000604030 CATSPERBQ9H7T0 1116 aa22■■□□□ 1.11
SH3D19-211ENST00000604030 CNOT7Q9UIV1 285 aaKnown RBP22■■□□□ 1.11
SH3D19-211ENST00000604030 ATP11BQ9Y2G3 1177 aa22■■□□□ 1.11
SH3D19-211ENST00000604030 FASTKD5Q7L8L6 764 aaKnown RBP22■■□□□ 1.11
SH3D19-211ENST00000604030 SAMD3Q8N6K7 520 aa22■■□□□ 1.11
SH3D19-211ENST00000604030 C20orf96Q9NUD7 363 aaPredicted RBP22■■□□□ 1.11
SH3D19-211ENST00000604030 PRMT7Q9NVM4 692 aaPredicted RBP22■■□□□ 1.11
SH3D19-211ENST00000604030 SMARCAL1Q9NZC9 954 aa22■■□□□ 1.11
SH3D19-211ENST00000604030 DCDC2Q9UHG0 476 aa22■■□□□ 1.11
SH3D19-211ENST00000604030 AGR3Q8TD06 166 aa22■■□□□ 1.11
SH3D19-211ENST00000604030 CNPY3Q9BT09 278 aa22■■□□□ 1.11
SH3D19-211ENST00000604030 ZNF556Q9HAH1 456 aa22■■□□□ 1.11
SH3D19-211ENST00000604030 DLGAP2Q9P1A6 1054 aa22■■□□□ 1.11
SH3D19-211ENST00000604030 AIM2O14862 343 aa22■■□□□ 1.11
SH3D19-211ENST00000604030 GRIN1Q05586 938 aa22■■□□□ 1.11
SH3D19-211ENST00000604030 CHI3L2Q15782 390 aa22■■□□□ 1.11
SH3D19-211ENST00000604030 SZRD1Q7Z422 152 aa22■■□□□ 1.11
SH3D19-211ENST00000604030 KIF2BQ8N4N8 673 aa22■■□□□ 1.11
SH3D19-211ENST00000604030 JADE3Q92613 823 aa22■■□□□ 1.11
SH3D19-211ENST00000604030 NEMP1O14524 444 aa21.99■■□□□ 1.11
SH3D19-211ENST00000604030 THRAP10827 490 aa21.99■■□□□ 1.11
SH3D19-211ENST00000604030 VEPH1Q14D04 833 aa21.99■■□□□ 1.11
SH3D19-211ENST00000604030 LMBRD2Q68DH5 695 aaPredicted RBP21.99■■□□□ 1.11
SH3D19-211ENST00000604030 FBXO33Q7Z6M2 555 aa21.99■■□□□ 1.11
SH3D19-211ENST00000604030 LRRC6Q86X45 466 aa21.99■■□□□ 1.11
SH3D19-211ENST00000604030 ZNF518BQ9C0D4 1074 aa21.99■■□□□ 1.11
SH3D19-211ENST00000604030 KBTBD4Q9NVX7 518 aa21.99■■□□□ 1.11
SH3D19-211ENST00000604030 MOCS2O96007 188 aaPredicted RBP21.99■■□□□ 1.11
SH3D19-211ENST00000604030 SCTRP47872 440 aa21.99■■□□□ 1.11
SH3D19-211ENST00000604030 RAP1GDS1P52306 607 aa21.99■■□□□ 1.11
SH3D19-211ENST00000604030 KCNK10P57789 538 aa21.99■■□□□ 1.11
SH3D19-211ENST00000604030 RUNX1T1Q06455 604 aa21.99■■□□□ 1.11
SH3D19-211ENST00000604030 AGPAT3Q9NRZ7 376 aa21.99■■□□□ 1.11
SH3D19-211ENST00000604030 PRR12Q9ULL5 1215 aa21.99■■□□□ 1.11
SH3D19-211ENST00000604030 NUP107P57740 925 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms