RNA–Protein interactions for RNA: ENST00000602726.1

PPFIA3-208, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-208ENST00000602726 RTP3Q9BQQ7 232 aa23.55■■□□□ 1.36
PPFIA3-208ENST00000602726 ZCWPW1Q9H0M4 648 aa23.55■■□□□ 1.36
PPFIA3-208ENST00000602726 AVENQ9NQS1 362 aaPredicted RBP23.55■■□□□ 1.36
PPFIA3-208ENST00000602726 YIPF1Q9Y548 306 aa23.55■■□□□ 1.36
PPFIA3-208ENST00000602726 ZDBF2Q9HCK1 2354 aa23.55■■□□□ 1.36
PPFIA3-208ENST00000602726 TSC2P49815 1807 aa23.54■■□□□ 1.36
PPFIA3-208ENST00000602726 NOTCH4Q99466 2003 aa23.54■■□□□ 1.36
PPFIA3-208ENST00000602726 MTMR11A4FU01 709 aa23.54■■□□□ 1.36
PPFIA3-208ENST00000602726 ALDH1A3P47895 512 aa23.54■■□□□ 1.36
PPFIA3-208ENST00000602726 PLD1Q13393 1074 aa23.54■■□□□ 1.36
PPFIA3-208ENST00000602726 CYP4A22Q5TCH4 519 aa23.54■■□□□ 1.36
PPFIA3-208ENST00000602726 PDCL2Q8N4E4 241 aa23.54■■□□□ 1.36
PPFIA3-208ENST00000602726 ATAD1Q8NBU5 361 aa23.54■■□□□ 1.36
PPFIA3-208ENST00000602726 ING5Q8WYH8 240 aa23.54■■□□□ 1.36
PPFIA3-208ENST00000602726 HPDLQ96IR7 371 aa23.54■■□□□ 1.36
PPFIA3-208ENST00000602726 CGRRF1Q99675 332 aa23.54■■□□□ 1.36
PPFIA3-208ENST00000602726 KCTD10Q9H3F6 313 aa23.54■■□□□ 1.36
PPFIA3-208ENST00000602726 GDAP2Q9NXN4 497 aa23.54■■□□□ 1.36
PPFIA3-208ENST00000602726 CEP72Q9P209 647 aa23.54■■□□□ 1.36
PPFIA3-208ENST00000602726 SLC27A5Q9Y2P5 690 aa23.54■■□□□ 1.36
PPFIA3-208ENST00000602726 SNX9Q9Y5X1 595 aa23.54■■□□□ 1.36
PPFIA3-208ENST00000602726 ANHXE9PGG2 379 aa23.53■■□□□ 1.36
PPFIA3-208ENST00000602726 PDXKO00764 312 aa23.53■■□□□ 1.36
PPFIA3-208ENST00000602726 ZNF197O14709 1029 aa23.53■■□□□ 1.36
PPFIA3-208ENST00000602726 EPHB3P54753 998 aa23.53■■□□□ 1.36
PPFIA3-208ENST00000602726 HTR4Q13639 388 aa23.53■■□□□ 1.36
PPFIA3-208ENST00000602726 KCNB1Q14721 858 aa23.53■■□□□ 1.36
PPFIA3-208ENST00000602726 SLC5A9Q2M3M2 681 aa23.53■■□□□ 1.36
PPFIA3-208ENST00000602726 PDZD4Q76G19 769 aaPredicted RBP23.53■■□□□ 1.36
PPFIA3-208ENST00000602726 TRAPPC11Q7Z392 1133 aa23.53■■□□□ 1.36
PPFIA3-208ENST00000602726 SUGP1Q8IWZ8 645 aaKnown RBP23.53■■□□□ 1.36
PPFIA3-208ENST00000602726 NPAS3Q8IXF0 933 aa23.53■■□□□ 1.36
PPFIA3-208ENST00000602726 FMR1NBQ8N0W7 255 aaPredicted RBP23.53■■□□□ 1.36
PPFIA3-208ENST00000602726 TMEM86AQ8N2M4 240 aa23.53■■□□□ 1.36
PPFIA3-208ENST00000602726 SLC44A3Q8N4M1 653 aa23.53■■□□□ 1.36
PPFIA3-208ENST00000602726 CRISPLD1Q9H336 500 aa23.53■■□□□ 1.36
PPFIA3-208ENST00000602726 L1RE1Q9UN81 338 aa23.53■■□□□ 1.36
PPFIA3-208ENST00000602726 DUSP12Q9UNI6 340 aa23.53■■□□□ 1.36
PPFIA3-208ENST00000602726 TSPY1Q01534 308 aa23.52■■□□□ 1.36
PPFIA3-208ENST00000602726 SMARCB1Q12824 385 aa23.52■■□□□ 1.36
PPFIA3-208ENST00000602726 MTSS1LQ765P7 747 aa23.52■■□□□ 1.36
PPFIA3-208ENST00000602726 SLC9A9Q8IVB4 645 aa23.52■■□□□ 1.36
PPFIA3-208ENST00000602726 DCP1BQ8IZD4 617 aaKnown RBP23.52■■□□□ 1.36
PPFIA3-208ENST00000602726 FBXL6Q8N531 539 aa23.52■■□□□ 1.36
PPFIA3-208ENST00000602726 TOP6BLQ8N6T0 577 aa23.52■■□□□ 1.36
PPFIA3-208ENST00000602726 ST13P5Q8NFI4 369 aaPredicted RBP23.52■■□□□ 1.36
PPFIA3-208ENST00000602726 ASAH2Q9NR71 780 aa23.52■■□□□ 1.36
PPFIA3-208ENST00000602726 DMAC2Q9NW81 257 aa23.52■■□□□ 1.36
PPFIA3-208ENST00000602726 HSFX1Q9UBD0 423 aa23.52■■□□□ 1.36
PPFIA3-208ENST00000602726 NUMBLQ9Y6R0 609 aa23.52■■□□□ 1.36
PPFIA3-208ENST00000602726 CALUO43852 315 aaPredicted RBP23.51■■□□□ 1.35
PPFIA3-208ENST00000602726 NR3C1P04150 777 aa23.51■■□□□ 1.35
PPFIA3-208ENST00000602726 TUFMP49411 452 aaKnown RBP23.51■■□□□ 1.35
PPFIA3-208ENST00000602726 MYL7Q01449 175 aa23.51■■□□□ 1.35
PPFIA3-208ENST00000602726 PARM1Q6UWI2 310 aa23.51■■□□□ 1.35
PPFIA3-208ENST00000602726 HS6ST3Q8IZP7 471 aa23.51■■□□□ 1.35
PPFIA3-208ENST00000602726 LEMD2Q8NC56 503 aa23.51■■□□□ 1.35
PPFIA3-208ENST00000602726 C2orf15Q8WU43 125 aaKnown RBP23.51■■□□□ 1.35
PPFIA3-208ENST00000602726 TMEM174Q8WUU8 243 aa23.51■■□□□ 1.35
PPFIA3-208ENST00000602726 MCRS1Q96EZ8 462 aa23.51■■□□□ 1.35
PPFIA3-208ENST00000602726 GDE1Q9NZC3 331 aa23.51■■□□□ 1.35
PPFIA3-208ENST00000602726 FBXL21Q9UKT6 434 aa23.51■■□□□ 1.35
PPFIA3-208ENST00000602726 CIZ1Q9ULV3 898 aaPredicted RBP23.51■■□□□ 1.35
PPFIA3-208ENST00000602726 MAPK8IP1Q9UQF2 711 aa23.51■■□□□ 1.35
PPFIA3-208ENST00000602726 NARSO43776 548 aaKnown RBP23.5■■□□□ 1.35
PPFIA3-208ENST00000602726 MYL4P12829 197 aa23.5■■□□□ 1.35
PPFIA3-208ENST00000602726 CEBPBP17676 345 aa23.5■■□□□ 1.35
PPFIA3-208ENST00000602726 CDR1P51861 262 aa23.5■■□□□ 1.35
PPFIA3-208ENST00000602726 FAM160A1Q05DH4 1040 aa23.5■■□□□ 1.35
PPFIA3-208ENST00000602726 PRSS36Q5K4E3 855 aa23.5■■□□□ 1.35
PPFIA3-208ENST00000602726 LRRTM3Q86VH5 581 aa23.5■■□□□ 1.35
PPFIA3-208ENST00000602726 ADGRF2Q8IZF7 708 aa23.5■■□□□ 1.35
PPFIA3-208ENST00000602726 TTC9BQ8N6N2 239 aa23.5■■□□□ 1.35
PPFIA3-208ENST00000602726 SPATA18Q8TC71 538 aa23.5■■□□□ 1.35
PPFIA3-208ENST00000602726 FGF14Q92915 247 aa23.5■■□□□ 1.35
PPFIA3-208ENST00000602726 TCEAL4Q96EI5 215 aa23.5■■□□□ 1.35
PPFIA3-208ENST00000602726 SEPT5Q99719 369 aaPredicted RBP23.5■■□□□ 1.35
PPFIA3-208ENST00000602726 DDX43Q9NXZ2 648 aaKnown RBP23.5■■□□□ 1.35
PPFIA3-208ENST00000602726 SOAT2O75908 522 aa23.49■■□□□ 1.35
PPFIA3-208ENST00000602726 MICAL2O94851 1124 aa23.49■■□□□ 1.35
PPFIA3-208ENST00000602726 CST3P01034 146 aaPredicted RBP23.49■■□□□ 1.35
PPFIA3-208ENST00000602726 LHX1P48742 406 aa23.49■■□□□ 1.35
PPFIA3-208ENST00000602726 TRPC3Q13507 836 aa23.49■■□□□ 1.35
PPFIA3-208ENST00000602726 PNOCQ13519 176 aa23.49■■□□□ 1.35
PPFIA3-208ENST00000602726 SNW1Q13573 536 aaKnown RBP23.49■■□□□ 1.35
PPFIA3-208ENST00000602726 SOWAHAQ2M3V2 549 aa23.49■■□□□ 1.35
PPFIA3-208ENST00000602726 MGAT5BQ3V5L5 792 aa23.49■■□□□ 1.35
PPFIA3-208ENST00000602726 DPH6Q7L8W6 267 aa23.49■■□□□ 1.35
PPFIA3-208ENST00000602726 GUF1Q8N442 669 aaKnown RBP23.49■■□□□ 1.35
PPFIA3-208ENST00000602726 ENGASEQ8NFI3 743 aa23.49■■□□□ 1.35
PPFIA3-208ENST00000602726 SPPL2BQ8TCT7 592 aa23.49■■□□□ 1.35
PPFIA3-208ENST00000602726 ZNF516Q92618 1163 aa23.49■■□□□ 1.35
PPFIA3-208ENST00000602726 ACBD6Q9BR61 282 aa23.49■■□□□ 1.35
PPFIA3-208ENST00000602726 GZF1Q9H116 711 aaPredicted RBP23.49■■□□□ 1.35
PPFIA3-208ENST00000602726 ABI2Q9NYB9 513 aaPredicted RBP23.49■■□□□ 1.35
PPFIA3-208ENST00000602726 TRAF3IP3Q9Y228 551 aa23.49■■□□□ 1.35
PPFIA3-208ENST00000602726 FRMD4BQ9Y2L6 1034 aa23.49■■□□□ 1.35
PPFIA3-208ENST00000602726 ASB3Q9Y575 518 aa23.49■■□□□ 1.35
PPFIA3-208ENST00000602726 PHACTR2O75167 634 aa23.48■■□□□ 1.35
PPFIA3-208ENST00000602726 PDGFBP01127 241 aaPredicted RBP23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms