RNA–Protein interactions for RNA: ENST00000602204.1

SIN3B-212, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 2

Gene SIN3B, Length 517 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-212ENST00000602204 ZNF606Q8WXB4 792 aa21.06■□□□□ 0.96
SIN3B-212ENST00000602204 TMEM176AQ96HP8 235 aa21.06■□□□□ 0.96
SIN3B-212ENST00000602204 ISCUQ9H1K1 167 aa21.06■□□□□ 0.96
SIN3B-212ENST00000602204 TBC1D13Q9NVG8 400 aa21.06■□□□□ 0.96
SIN3B-212ENST00000602204 CASTOR2A6NHX0 329 aa21.05■□□□□ 0.96
SIN3B-212ENST00000602204 THAP12O43422 761 aa21.05■□□□□ 0.96
SIN3B-212ENST00000602204 RTN2O75298 545 aa21.05■□□□□ 0.96
SIN3B-212ENST00000602204 BAIAP3O94812 1187 aa21.05■□□□□ 0.96
SIN3B-212ENST00000602204 LSM8O95777 96 aaKnown RBP21.05■□□□□ 0.96
SIN3B-212ENST00000602204 MMEP08473 750 aa21.05■□□□□ 0.96
SIN3B-212ENST00000602204 FGFR1P11362 822 aa21.05■□□□□ 0.96
SIN3B-212ENST00000602204 VDRP11473 427 aa21.05■□□□□ 0.96
SIN3B-212ENST00000602204 IBSPP21815 317 aaPredicted RBP21.05■□□□□ 0.96
SIN3B-212ENST00000602204 NDST1P52848 882 aa21.05■□□□□ 0.96
SIN3B-212ENST00000602204 STILQ15468 1287 aa21.05■□□□□ 0.96
SIN3B-212ENST00000602204 CLEC16AQ2KHT3 1053 aa21.05■□□□□ 0.96
SIN3B-212ENST00000602204 TAF3Q5VWG9 929 aa21.05■□□□□ 0.96
SIN3B-212ENST00000602204 SLC4A11Q8NBS3 891 aa21.05■□□□□ 0.96
SIN3B-212ENST00000602204 CASD1Q96PB1 797 aa21.05■□□□□ 0.96
SIN3B-212ENST00000602204 ELOVL4Q9GZR5 314 aa21.05■□□□□ 0.96
SIN3B-212ENST00000602204 ACP6Q9NPH0 428 aa21.05■□□□□ 0.96
SIN3B-212ENST00000602204 SEPT11Q9NVA2 429 aaKnown RBP21.05■□□□□ 0.96
SIN3B-212ENST00000602204 CYP1A1P04798 512 aaPredicted RBP21.04■□□□□ 0.96
SIN3B-212ENST00000602204 COLGALT2Q8IYK4 626 aa21.04■□□□□ 0.96
SIN3B-212ENST00000602204 KBTBD7Q8WVZ9 684 aa21.04■□□□□ 0.96
SIN3B-212ENST00000602204 SENP8Q96LD8 212 aa21.04■□□□□ 0.96
SIN3B-212ENST00000602204 FAM193BQ96PV7 902 aaPredicted RBP21.04■□□□□ 0.96
SIN3B-212ENST00000602204 PCDHB18PQ96TA0 734 aa21.04■□□□□ 0.96
SIN3B-212ENST00000602204 MRPL45Q9BRJ2 306 aaKnown RBP21.04■□□□□ 0.96
SIN3B-212ENST00000602204 ZNF518BQ9C0D4 1074 aa21.04■□□□□ 0.96
SIN3B-212ENST00000602204 IL23AQ9NPF7 189 aa21.04■□□□□ 0.96
SIN3B-212ENST00000602204 LZTFL1Q9NQ48 299 aa21.04■□□□□ 0.96
SIN3B-212ENST00000602204 PRKAG2Q9UGJ0 569 aa21.04■□□□□ 0.96
SIN3B-212ENST00000602204 L1RE1Q9UN81 338 aa21.04■□□□□ 0.96
SIN3B-212ENST00000602204 VWA8A3KMH1 1905 aa21.04■□□□□ 0.96
SIN3B-212ENST00000602204 PTPRDP23468 1912 aa21.04■□□□□ 0.96
SIN3B-212ENST00000602204 COL4A6Q14031 1691 aa21.03■□□□□ 0.96
SIN3B-212ENST00000602204 A0A0A6YYK5 440 aaPredicted RBP21.03■□□□□ 0.96
SIN3B-212ENST00000602204 ANKRD62A6NC57 917 aa21.03■□□□□ 0.96
SIN3B-212ENST00000602204 RCCD1A6NED2 376 aa21.03■□□□□ 0.96
SIN3B-212ENST00000602204 CYB561D2O14569 222 aa21.03■□□□□ 0.96
SIN3B-212ENST00000602204 CAPN15O75808 1086 aa21.03■□□□□ 0.96
SIN3B-212ENST00000602204 TMEM253P0C7T8 217 aa21.03■□□□□ 0.96
SIN3B-212ENST00000602204 UNGP13051 313 aaPredicted RBP21.03■□□□□ 0.96
SIN3B-212ENST00000602204 ITGB8P26012 769 aa21.03■□□□□ 0.96
SIN3B-212ENST00000602204 CDH5P33151 784 aaPredicted RBP21.03■□□□□ 0.96
SIN3B-212ENST00000602204 CENPCQ03188 943 aa21.03■□□□□ 0.96
SIN3B-212ENST00000602204 RNASELQ05823 741 aaKnown RBP21.03■□□□□ 0.96
SIN3B-212ENST00000602204 PPIGQ13427 754 aaKnown RBP eCLIP21.03■□□□□ 0.968e-8■□□□□ 9.4
SIN3B-212ENST00000602204 PALB2Q86YC2 1186 aa21.03■□□□□ 0.96
SIN3B-212ENST00000602204 ADGRF2Q8IZF7 708 aa21.03■□□□□ 0.96
SIN3B-212ENST00000602204 RNF10Q8N5U6 811 aaKnown RBP21.03■□□□□ 0.96
SIN3B-212ENST00000602204 CALR3Q96L12 384 aaKnown RBP21.03■□□□□ 0.96
SIN3B-212ENST00000602204 TWNKQ96RR1 684 aa21.03■□□□□ 0.96
SIN3B-212ENST00000602204 TMEM175Q9BSA9 504 aa21.03■□□□□ 0.96
SIN3B-212ENST00000602204 LACRTQ9GZZ8 138 aa21.03■□□□□ 0.96
SIN3B-212ENST00000602204 PDCL3Q9H2J4 239 aa21.03■□□□□ 0.96
SIN3B-212ENST00000602204 SNX25Q9H3E2 840 aa21.03■□□□□ 0.96
SIN3B-212ENST00000602204 DSEQ9UL01 958 aa21.03■□□□□ 0.96
SIN3B-212ENST00000602204 NCANO14594 1321 aa21.03■□□□□ 0.96
SIN3B-212ENST00000602204 KIAA1671Q9BY89 1806 aa21.02■□□□□ 0.96
SIN3B-212ENST00000602204 M0QZQ0 153 aa21.02■□□□□ 0.96
SIN3B-212ENST00000602204 GABRDO14764 452 aa21.02■□□□□ 0.96
SIN3B-212ENST00000602204 KIF5CO60282 957 aa21.02■□□□□ 0.96
SIN3B-212ENST00000602204 AMHP03971 560 aa21.02■□□□□ 0.96
SIN3B-212ENST00000602204 CYP11A1P05108 521 aa21.02■□□□□ 0.96
SIN3B-212ENST00000602204 ODC1P11926 461 aa21.02■□□□□ 0.96
SIN3B-212ENST00000602204 CSF2RAP15509 400 aa21.02■□□□□ 0.96
SIN3B-212ENST00000602204 LHX1P48742 406 aa21.02■□□□□ 0.96
SIN3B-212ENST00000602204 ETF1P62495 437 aaKnown RBP21.02■□□□□ 0.96
SIN3B-212ENST00000602204 CNGA2Q16280 664 aa21.02■□□□□ 0.96
SIN3B-212ENST00000602204 ZNF394Q53GI3 561 aa21.02■□□□□ 0.96
SIN3B-212ENST00000602204 SGO2Q562F6 1265 aa21.02■□□□□ 0.96
SIN3B-212ENST00000602204 ACAD10Q6JQN1 1059 aa21.02■□□□□ 0.96
SIN3B-212ENST00000602204 CD300LGQ6UXG3 332 aa21.02■□□□□ 0.96
SIN3B-212ENST00000602204 DSTYKQ6XUX3 929 aa21.02■□□□□ 0.96
SIN3B-212ENST00000602204 CRYBG2Q8N1P7 616 aa21.02■□□□□ 0.96
SIN3B-212ENST00000602204 LRRC43Q8N309 656 aa21.02■□□□□ 0.96
SIN3B-212ENST00000602204 PDCL2Q8N4E4 241 aa21.02■□□□□ 0.96
SIN3B-212ENST00000602204 C3orf58Q8NDZ4 430 aa21.02■□□□□ 0.96
SIN3B-212ENST00000602204 TRIM11Q96F44 468 aa21.02■□□□□ 0.96
SIN3B-212ENST00000602204 C16orf45Q96MC5 204 aaPredicted RBP21.02■□□□□ 0.96
SIN3B-212ENST00000602204 LHX5Q9H2C1 402 aa21.02■□□□□ 0.96
SIN3B-212ENST00000602204 HMGXB4Q9UGU5 601 aa21.02■□□□□ 0.96
SIN3B-212ENST00000602204 PUF60Q9UHX1 559 aaKnown RBP21.02■□□□□ 0.96
SIN3B-212ENST00000602204 CEP83Q9Y592 693 aa21.02■□□□□ 0.96
SIN3B-212ENST00000602204 CARNS1A5YM72 827 aa21.01■□□□□ 0.95
SIN3B-212ENST00000602204 B3GAT3O94766 335 aa21.01■□□□□ 0.95
SIN3B-212ENST00000602204 DDHD2O94830 711 aa21.01■□□□□ 0.95
SIN3B-212ENST00000602204 CD19P15391 556 aa21.01■□□□□ 0.95
SIN3B-212ENST00000602204 BRD2P25440 801 aaKnown RBP21.01■□□□□ 0.95
SIN3B-212ENST00000602204 GNL1P36915 607 aaPredicted RBP21.01■□□□□ 0.95
SIN3B-212ENST00000602204 GALCP54803 685 aa21.01■□□□□ 0.95
SIN3B-212ENST00000602204 NOMO3P69849 1222 aa21.01■□□□□ 0.95
SIN3B-212ENST00000602204 TCEAL1Q15170 157 aa21.01■□□□□ 0.95
SIN3B-212ENST00000602204 ZNF280BQ86YH2 543 aa21.01■□□□□ 0.95
SIN3B-212ENST00000602204 OR6B3Q8NGW1 331 aa21.01■□□□□ 0.95
SIN3B-212ENST00000602204 CTNNBL1Q8WYA6 563 aaPredicted RBP21.01■□□□□ 0.95
SIN3B-212ENST00000602204 TFAP2BQ92481 460 aa21.01■□□□□ 0.95
SIN3B-212ENST00000602204 VCPIP1Q96JH7 1222 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms