RNA–Protein interactions for RNA: ENST00000601816.3

PNKP-216, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 682 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-216ENST00000601816 PFKPQ01813 784 aa28.07■■■□□ 2.08
PNKP-216ENST00000601816 EHHADHQ08426 723 aa28.07■■■□□ 2.08
PNKP-216ENST00000601816 CBWD2Q8IUF1 395 aa28.07■■■□□ 2.08
PNKP-216ENST00000601816 CSGALNACT2Q8N6G5 542 aa28.07■■■□□ 2.08
PNKP-216ENST00000601816 TTC9BQ8N6N2 239 aa28.07■■■□□ 2.08
PNKP-216ENST00000601816 FAM84AQ96KN4 292 aa28.07■■■□□ 2.08
PNKP-216ENST00000601816 MTMR12Q9C0I1 747 aa28.07■■■□□ 2.08
PNKP-216ENST00000601816 DNAJC25Q9H1X3 360 aa28.07■■■□□ 2.08
PNKP-216ENST00000601816 PVALEFA0A1B0GWK0 134 aa28.06■■■□□ 2.08
PNKP-216ENST00000601816 H0Y858 1186 aa28.06■■■□□ 2.08
PNKP-216ENST00000601816 NRG2O14511 850 aaPredicted RBP28.06■■■□□ 2.08
PNKP-216ENST00000601816 MOSPD3O75425 235 aa28.06■■■□□ 2.08
PNKP-216ENST00000601816 KRT19P08727 400 aa28.06■■■□□ 2.08
PNKP-216ENST00000601816 KRT85P78386 507 aa28.06■■■□□ 2.08
PNKP-216ENST00000601816 BFSP1Q12934 665 aa28.06■■■□□ 2.08
PNKP-216ENST00000601816 CUL4BQ13620 913 aa28.06■■■□□ 2.08
PNKP-216ENST00000601816 SURF1Q15526 300 aa28.06■■■□□ 2.08
PNKP-216ENST00000601816 TANGO2Q6ICL3 276 aa28.06■■■□□ 2.08
PNKP-216ENST00000601816 PHLDB3Q6NSJ2 640 aa28.06■■■□□ 2.08
PNKP-216ENST00000601816 NELFCDQ8IXH7 590 aa28.06■■■□□ 2.08
PNKP-216ENST00000601816 SCFD1Q8WVM8 642 aa28.06■■■□□ 2.08
PNKP-216ENST00000601816 ATOH1Q92858 354 aaPredicted RBP28.06■■■□□ 2.08
PNKP-216ENST00000601816 ELSPBP1Q96BH3 223 aa28.06■■■□□ 2.08
PNKP-216ENST00000601816 SHDQ96IW2 340 aa28.06■■■□□ 2.08
PNKP-216ENST00000601816 ANKRD36BP1Q96IX9 119 aa28.06■■■□□ 2.08
PNKP-216ENST00000601816 AGPAT3Q9NRZ7 376 aa28.06■■■□□ 2.08
PNKP-216ENST00000601816 SERTAD1Q9UHV2 236 aa28.06■■■□□ 2.08
PNKP-216ENST00000601816 ASB3Q9Y575 518 aa28.06■■■□□ 2.08
PNKP-216ENST00000601816 SOAT2O75908 522 aa28.05■■■□□ 2.08
PNKP-216ENST00000601816 SLFN14P0C7P3 912 aa28.05■■■□□ 2.08
PNKP-216ENST00000601816 GJA1P17302 382 aa28.05■■■□□ 2.08
PNKP-216ENST00000601816 RBP5P82980 135 aa28.05■■■□□ 2.08
PNKP-216ENST00000601816 TCHHQ07283 1943 aa28.05■■■□□ 2.08
PNKP-216ENST00000601816 SMARCB1Q12824 385 aa28.05■■■□□ 2.08
PNKP-216ENST00000601816 FAM78AQ5JUQ0 283 aa28.05■■■□□ 2.08
PNKP-216ENST00000601816 HS2ST1Q7LGA3 356 aa28.05■■■□□ 2.08
PNKP-216ENST00000601816 CCDC105Q8IYK2 499 aa28.05■■■□□ 2.08
PNKP-216ENST00000601816 LEO1Q8WVC0 666 aaPredicted RBP28.05■■■□□ 2.08
PNKP-216ENST00000601816 SPATA32Q96LK8 384 aa28.05■■■□□ 2.08
PNKP-216ENST00000601816 ASB16Q96NS5 453 aa28.05■■■□□ 2.08
PNKP-216ENST00000601816 PHOX2BQ99453 314 aa28.05■■■□□ 2.08
PNKP-216ENST00000601816 SEPT5Q99719 369 aaPredicted RBP28.05■■■□□ 2.08
PNKP-216ENST00000601816 ZFP14Q9HCL3 533 aa28.05■■■□□ 2.08
PNKP-216ENST00000601816 FAM86C1Q9NVL1 165 aa28.05■■■□□ 2.08
PNKP-216ENST00000601816 INTS13Q9NVM9 706 aa28.05■■■□□ 2.08
PNKP-216ENST00000601816 ZDHHC9Q9Y397 364 aa28.05■■■□□ 2.08
PNKP-216ENST00000601816 R3HCC1Q9Y3T6 440 aaKnown RBP28.05■■■□□ 2.08
PNKP-216ENST00000601816 TGFB1I1O43294 461 aa28.04■■■□□ 2.08
PNKP-216ENST00000601816 HUS1O60921 280 aa28.04■■■□□ 2.08
PNKP-216ENST00000601816 TNNC2P02585 160 aa28.04■■■□□ 2.08
PNKP-216ENST00000601816 FCARP24071 287 aa28.04■■■□□ 2.08
PNKP-216ENST00000601816 TUFMP49411 452 aaKnown RBP28.04■■■□□ 2.08
PNKP-216ENST00000601816 SNRPFP62306 86 aaKnown RBP28.04■■■□□ 2.08
PNKP-216ENST00000601816 TEAD2Q15562 447 aa28.04■■■□□ 2.08
PNKP-216ENST00000601816 MGAT5BQ3V5L5 792 aa28.04■■■□□ 2.08
PNKP-216ENST00000601816 LMBRD2Q68DH5 695 aaPredicted RBP28.04■■■□□ 2.08
PNKP-216ENST00000601816 TMC8Q8IU68 726 aa28.04■■■□□ 2.08
PNKP-216ENST00000601816 GRAMD1CQ8IYS0 662 aa28.04■■■□□ 2.08
PNKP-216ENST00000601816 DCP1BQ8IZD4 617 aaKnown RBP28.04■■■□□ 2.08
PNKP-216ENST00000601816 PDCL2Q8N4E4 241 aa28.04■■■□□ 2.08
PNKP-216ENST00000601816 CXorf38Q8TB03 319 aa28.04■■■□□ 2.08
PNKP-216ENST00000601816 SHKBP1Q8TBC3 707 aa28.04■■■□□ 2.08
PNKP-216ENST00000601816 C2orf15Q8WU43 125 aaKnown RBP28.04■■■□□ 2.08
PNKP-216ENST00000601816 LRRC3Q9BY71 257 aa28.04■■■□□ 2.08
PNKP-216ENST00000601816 PLA2G2FQ9BZM2 168 aa28.04■■■□□ 2.08
PNKP-216ENST00000601816 SLC39A2Q9NP94 309 aa28.04■■■□□ 2.08
PNKP-216ENST00000601816 ACTN4O43707 911 aaKnown RBP28.03■■■□□ 2.08
PNKP-216ENST00000601816 PFKFB1P16118 471 aa28.03■■■□□ 2.08
PNKP-216ENST00000601816 CMA1P23946 247 aa28.03■■■□□ 2.08
PNKP-216ENST00000601816 TSPY1Q01534 308 aa28.03■■■□□ 2.08
PNKP-216ENST00000601816 SNW1Q13573 536 aaKnown RBP28.03■■■□□ 2.08
PNKP-216ENST00000601816 MLF2Q15773 248 aaPredicted RBP28.03■■■□□ 2.08
PNKP-216ENST00000601816 DNAJB7Q7Z6W7 309 aaPredicted RBP28.03■■■□□ 2.08
PNKP-216ENST00000601816 ITIH5Q86UX2 942 aa28.03■■■□□ 2.08
PNKP-216ENST00000601816 DTWD2Q8NBA8 298 aa28.03■■■□□ 2.08
PNKP-216ENST00000601816 SPPL2BQ8TCT7 592 aa28.03■■■□□ 2.08
PNKP-216ENST00000601816 SMARCD2Q92925 531 aa28.03■■■□□ 2.08
PNKP-216ENST00000601816 PSMG2Q969U7 264 aa28.03■■■□□ 2.08
PNKP-216ENST00000601816 ZSWIM3Q96MP5 696 aa28.03■■■□□ 2.08
PNKP-216ENST00000601816 SLITRK6Q9H5Y7 841 aa28.03■■■□□ 2.08
PNKP-216ENST00000601816 SIX4Q9UIU6 781 aa28.03■■■□□ 2.08
PNKP-216ENST00000601816 L1RE1Q9UN81 338 aa28.03■■■□□ 2.08
PNKP-216ENST00000601816 PIEZO1Q92508 2521 aa28.03■■■□□ 2.08
PNKP-216ENST00000601816 PTPRJQ12913 1337 aa28.02■■■□□ 2.08
PNKP-216ENST00000601816 A0A1W2PRU2 124 aa28.02■■■□□ 2.08
PNKP-216ENST00000601816 CYP2J2P51589 502 aa28.02■■■□□ 2.08
PNKP-216ENST00000601816 CDR1P51861 262 aa28.02■■■□□ 2.08
PNKP-216ENST00000601816 STARD6P59095 220 aa28.02■■■□□ 2.08
PNKP-216ENST00000601816 PRKCQQ04759 706 aa28.02■■■□□ 2.08
PNKP-216ENST00000601816 VEPH1Q14D04 833 aa28.02■■■□□ 2.08
PNKP-216ENST00000601816 SNRNP35Q16560 246 aaKnown RBP28.02■■■□□ 2.08
PNKP-216ENST00000601816 DUOXA2Q1HG44 320 aa28.02■■■□□ 2.08
PNKP-216ENST00000601816 BMT2Q1RMZ1 405 aa28.02■■■□□ 2.08
PNKP-216ENST00000601816 SLC44A4Q53GD3 710 aa28.02■■■□□ 2.08
PNKP-216ENST00000601816 SCARA3Q6AZY7 606 aa28.02■■■□□ 2.08
PNKP-216ENST00000601816 LRRTM3Q86VH5 581 aa28.02■■■□□ 2.08
PNKP-216ENST00000601816 TMEM86AQ8N2M4 240 aa28.02■■■□□ 2.08
PNKP-216ENST00000601816 OR5B17Q8NGF7 314 aa28.02■■■□□ 2.08
PNKP-216ENST00000601816 FAM200AQ8TCP9 573 aa28.02■■■□□ 2.08
PNKP-216ENST00000601816 CHAMP1Q96JM3 812 aa28.02■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms