RNA–Protein interactions for RNA: ENST00000601392.5

CELF4-222, Transcript of CUGBP Elav-like family member 4, human

TSL 1 (best)

Gene CELF4, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CELF4-222	ENST00000601392	C18orf25	Q96B23	403 aa	Predicted RBP	13.66	□□□□□ -0.22
CELF4-222	ENST00000601392	LMAN2L	Q9H0V9	348 aa		13.66	□□□□□ -0.22
CELF4-222	ENST00000601392	KCNF1	Q9H3M0	494 aa		13.66	□□□□□ -0.22
CELF4-222	ENST00000601392	NSUN3	Q9H649	340 aa	Known RBP	13.66	□□□□□ -0.22
CELF4-222	ENST00000601392	AAAS	Q9NRG9	546 aa		13.66	□□□□□ -0.22
CELF4-222	ENST00000601392	KCND1	Q9NSA2	647 aa		13.66	□□□□□ -0.22
CELF4-222	ENST00000601392	RNF19A	Q9NV58	838 aa		13.66	□□□□□ -0.22
CELF4-222	ENST00000601392	TUBGCP4	Q9UGJ1	667 aa		13.66	□□□□□ -0.22
CELF4-222	ENST00000601392	AJAP1	Q9UKB5	411 aa	Predicted RBP	13.66	□□□□□ -0.22
CELF4-222	ENST00000601392	PCDHB12	Q9Y5F1	795 aa		13.66	□□□□□ -0.22
CELF4-222	ENST00000601392	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	13.66	□□□□□ -0.22
CELF4-222	ENST00000601392	BDP1	A6H8Y1	2624 aa		13.66	□□□□□ -0.22
CELF4-222	ENST00000601392	BRWD1	Q9NSI6	2320 aa		13.65	□□□□□ -0.22
CELF4-222	ENST00000601392	KPNA7	A9QM74	516 aa		13.65	□□□□□ -0.22
CELF4-222	ENST00000601392	GRM6	O15303	877 aa		13.65	□□□□□ -0.22
CELF4-222	ENST00000601392	ACO1	P21399	889 aa	Known RBP	13.65	□□□□□ -0.22
CELF4-222	ENST00000601392	ASPA	P45381	313 aa		13.65	□□□□□ -0.22
CELF4-222	ENST00000601392	TAF6	P49848	677 aa		13.65	□□□□□ -0.22
CELF4-222	ENST00000601392	SOX4	Q06945	474 aa	Predicted RBP	13.65	□□□□□ -0.22
CELF4-222	ENST00000601392	DSC1	Q08554	894 aa		13.65	□□□□□ -0.22
CELF4-222	ENST00000601392	GOLGA8F	Q08AF8	430 aa		13.65	□□□□□ -0.22
CELF4-222	ENST00000601392	GOLGA8DP	Q0D2H9	430 aa		13.65	□□□□□ -0.22
CELF4-222	ENST00000601392	KLHL30	Q0D2K2	578 aa		13.65	□□□□□ -0.22
CELF4-222	ENST00000601392	ASIC2	Q16515	512 aa		13.65	□□□□□ -0.22
CELF4-222	ENST00000601392	UPP1	Q16831	310 aa		13.65	□□□□□ -0.22
CELF4-222	ENST00000601392	ARHGAP44	Q17R89	818 aa		13.65	□□□□□ -0.22
CELF4-222	ENST00000601392	SV2C	Q496J9	727 aa		13.65	□□□□□ -0.22
CELF4-222	ENST00000601392	CLLU1OS	Q5K130	101 aa		13.65	□□□□□ -0.22
CELF4-222	ENST00000601392	DCLRE1A	Q6PJP8	1040 aa		13.65	□□□□□ -0.22
CELF4-222	ENST00000601392	EP400NL	Q6ZTU2	488 aa		13.65	□□□□□ -0.22
CELF4-222	ENST00000601392	SPATA18	Q8TC71	538 aa		13.65	□□□□□ -0.22
CELF4-222	ENST00000601392	ADAMTS19	Q8TE59	1207 aa		13.65	□□□□□ -0.22
CELF4-222	ENST00000601392	FAM84A	Q96KN4	292 aa		13.65	□□□□□ -0.22
CELF4-222	ENST00000601392	MRPL9	Q9BYD2	267 aa	Known RBP	13.65	□□□□□ -0.22
CELF4-222	ENST00000601392	TMEM189-UBE2V1	I3L0A0	370 aa		13.64	□□□□□ -0.23
CELF4-222	ENST00000601392	ZNF500	O60304	480 aa	Predicted RBP	13.64	□□□□□ -0.23
CELF4-222	ENST00000601392	TACC1	O75410	805 aa		13.64	□□□□□ -0.23
CELF4-222	ENST00000601392	LINC00271	P0C7V0	271 aa		13.64	□□□□□ -0.23
CELF4-222	ENST00000601392	CLCN1	P35523	988 aa		13.64	□□□□□ -0.23
CELF4-222	ENST00000601392	CYLC1	P35663	651 aa	Predicted RBP	13.64	□□□□□ -0.23
CELF4-222	ENST00000601392	AARS	P49588	968 aa	Known RBP eCLIP	13.64	□□□□□ -0.23
CELF4-222	ENST00000601392	AFF1	P51825	1210 aa	Known RBP	13.64	□□□□□ -0.23
CELF4-222	ENST00000601392	LILRA4	P59901	499 aa		13.64	□□□□□ -0.23
CELF4-222	ENST00000601392	ASTE1	Q2TB18	679 aa	Predicted RBP	13.64	□□□□□ -0.23
CELF4-222	ENST00000601392	TCEAL5	Q5H9L2	206 aa		13.64	□□□□□ -0.23
CELF4-222	ENST00000601392	SCARA3	Q6AZY7	606 aa		13.64	□□□□□ -0.23
CELF4-222	ENST00000601392	SPOPL	Q6IQ16	392 aa		13.64	□□□□□ -0.23
CELF4-222	ENST00000601392	ZNF677	Q86XU0	584 aa		13.64	□□□□□ -0.23
CELF4-222	ENST00000601392	LRRC43	Q8N309	656 aa		13.64	□□□□□ -0.23
CELF4-222	ENST00000601392	KAT5	Q92993	513 aa		13.64	□□□□□ -0.23
CELF4-222	ENST00000601392	PPP2R3C	Q969Q6	453 aa		13.64	□□□□□ -0.23
CELF4-222	ENST00000601392	CCDC42	Q96M95	316 aa		13.64	□□□□□ -0.23
CELF4-222	ENST00000601392	CASD1	Q96PB1	797 aa		13.64	□□□□□ -0.23
CELF4-222	ENST00000601392	CHP1	Q99653	195 aa		13.64	□□□□□ -0.23
CELF4-222	ENST00000601392	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	13.64	□□□□□ -0.23
CELF4-222	ENST00000601392	ALG13	Q9NP73	1137 aa	Known RBP	13.64	□□□□□ -0.23
CELF4-222	ENST00000601392	ARHGAP20	Q9P2F6	1191 aa		13.64	□□□□□ -0.23
CELF4-222	ENST00000601392	KIAA1257	Q9ULG3	409 aa		13.64	□□□□□ -0.23
CELF4-222	ENST00000601392	ATG2A	Q2TAZ0	1938 aa		13.64	□□□□□ -0.23
CELF4-222	ENST00000601392	ARHGEF37	A1IGU5	675 aa		13.63	□□□□□ -0.23
CELF4-222	ENST00000601392	EIF3CL	B5ME19	914 aa	Known RBP	13.63	□□□□□ -0.23
CELF4-222	ENST00000601392	PODXL	O00592	558 aa		13.63	□□□□□ -0.23
CELF4-222	ENST00000601392	LCA5L	O95447	670 aa		13.63	□□□□□ -0.23
CELF4-222	ENST00000601392	POMC	P01189	267 aa		13.63	□□□□□ -0.23
CELF4-222	ENST00000601392	LAG3	P18627	525 aa		13.63	□□□□□ -0.23
CELF4-222	ENST00000601392	KCNQ1	P51787	676 aa		13.63	□□□□□ -0.23
CELF4-222	ENST00000601392	GUCY2F	P51841	1108 aa		13.63	□□□□□ -0.23
CELF4-222	ENST00000601392	TNNC1	P63316	161 aa		13.63	□□□□□ -0.23
CELF4-222	ENST00000601392	PTK2	Q05397	1052 aa		13.63	□□□□□ -0.23
CELF4-222	ENST00000601392	INCA1	Q0VD86	236 aa		13.63	□□□□□ -0.23
CELF4-222	ENST00000601392	BMS1	Q14692	1282 aa	Known RBP	13.63	□□□□□ -0.23
CELF4-222	ENST00000601392	E4F1	Q66K89	784 aa	Predicted RBP	13.63	□□□□□ -0.23
CELF4-222	ENST00000601392	VPS36	Q86VN1	386 aa		13.63	□□□□□ -0.23
CELF4-222	ENST00000601392	UNC93A	Q86WB7	457 aa		13.63	□□□□□ -0.23
CELF4-222	ENST00000601392	COLGALT2	Q8IYK4	626 aa		13.63	□□□□□ -0.23
CELF4-222	ENST00000601392	TOP6BL	Q8N6T0	577 aa		13.63	□□□□□ -0.23
CELF4-222	ENST00000601392	KLHL23	Q8NBE8	558 aa		13.63	□□□□□ -0.23
CELF4-222	ENST00000601392	KIAA1524	Q8TCG1	905 aa		13.63	□□□□□ -0.23
CELF4-222	ENST00000601392	ZNF830	Q96NB3	372 aa	Predicted RBP	13.63	□□□□□ -0.23
CELF4-222	ENST00000601392	UHRF1	Q96T88	793 aa	Predicted RBP	13.63	□□□□□ -0.23
CELF4-222	ENST00000601392	EIF3C	Q99613	913 aa	Known RBP	13.63	□□□□□ -0.23
CELF4-222	ENST00000601392	TMEM175	Q9BSA9	504 aa		13.63	□□□□□ -0.23
CELF4-222	ENST00000601392	SYT11	Q9BT88	431 aa		13.63	□□□□□ -0.23
CELF4-222	ENST00000601392	DNAI2	Q9GZS0	605 aa		13.63	□□□□□ -0.23
CELF4-222	ENST00000601392	HAUS4	Q9H6D7	363 aa		13.63	□□□□□ -0.23
CELF4-222	ENST00000601392	UBE2Z	Q9H832	354 aa	Predicted RBP	13.63	□□□□□ -0.23
CELF4-222	ENST00000601392	CISH	Q9NSE2	258 aa		13.63	□□□□□ -0.23
CELF4-222	ENST00000601392	TBC1D13	Q9NVG8	400 aa		13.63	□□□□□ -0.23
CELF4-222	ENST00000601392	EPN1	Q9Y6I3	576 aa	Predicted RBP	13.63	□□□□□ -0.23
CELF4-222	ENST00000601392	NCOR1	O75376	2440 aa		13.63	□□□□□ -0.23
CELF4-222	ENST00000601392	ANK1	P16157	1881 aa		13.63	□□□□□ -0.23
CELF4-222	ENST00000601392	REV3L	O60673	3130 aa		13.62	□□□□□ -0.23
CELF4-222	ENST00000601392	TCF20	Q9UGU0	1960 aa	Known RBP	13.62	□□□□□ -0.23
CELF4-222	ENST00000601392	PLXNA4	Q9HCM2	1894 aa		13.62	□□□□□ -0.23
CELF4-222	ENST00000601392	ITGB1	P05556	798 aa		13.62	□□□□□ -0.23
CELF4-222	ENST00000601392	PAEP	P09466	180 aa		13.62	□□□□□ -0.23
CELF4-222	ENST00000601392	KCNA5	P22460	613 aa		13.62	□□□□□ -0.23
CELF4-222	ENST00000601392	CLCNKB	P51801	687 aa		13.62	□□□□□ -0.23
CELF4-222	ENST00000601392	ZNF132	P52740	706 aa		13.62	□□□□□ -0.23
CELF4-222	ENST00000601392	KRT83	P78385	493 aa		13.62	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 33 ms