RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 RAD23BP54727 409 aa24.07■■□□□ 1.44
IRF3-228ENST00000601291 UNC93AQ86WB7 457 aa24.07■■□□□ 1.44
IRF3-228ENST00000601291 COLGALT2Q8IYK4 626 aa24.07■■□□□ 1.44
IRF3-228ENST00000601291 ADGRF2Q8IZF7 708 aa24.07■■□□□ 1.44
IRF3-228ENST00000601291 LRRC43Q8N309 656 aa24.07■■□□□ 1.44
IRF3-228ENST00000601291 OR6B3Q8NGW1 331 aa24.07■■□□□ 1.44
IRF3-228ENST00000601291 SENP8Q96LD8 212 aa24.07■■□□□ 1.44
IRF3-228ENST00000601291 TSGA10Q9BZW7 698 aa24.07■■□□□ 1.44
IRF3-228ENST00000601291 HMGXB4Q9UGU5 601 aa24.07■■□□□ 1.44
IRF3-228ENST00000601291 L1RE1Q9UN81 338 aa24.07■■□□□ 1.44
IRF3-228ENST00000601291 TTC3P53804 2025 aa24.06■■□□□ 1.44
IRF3-228ENST00000601291 ARHGEF37A1IGU5 675 aa24.06■■□□□ 1.44
IRF3-228ENST00000601291 MED7O43513 233 aa24.06■■□□□ 1.44
IRF3-228ENST00000601291 UPP2O95045 317 aa24.06■■□□□ 1.44
IRF3-228ENST00000601291 ACRP10323 421 aa24.06■■□□□ 1.44
IRF3-228ENST00000601291 CD19P15391 556 aa24.06■■□□□ 1.44
IRF3-228ENST00000601291 AARSP49588 968 aaKnown RBP eCLIP24.06■■□□□ 1.442e-7■■■■□ 26.2
IRF3-228ENST00000601291 GATMP50440 423 aa24.06■■□□□ 1.44
IRF3-228ENST00000601291 FPGSQ05932 587 aa24.06■■□□□ 1.44
IRF3-228ENST00000601291 TRIM72Q6ZMU5 477 aa24.06■■□□□ 1.44
IRF3-228ENST00000601291 LIMS2Q7Z4I7 341 aa24.06■■□□□ 1.44
IRF3-228ENST00000601291 TMEM86AQ8N2M4 240 aa24.06■■□□□ 1.44
IRF3-228ENST00000601291 SLC4A11Q8NBS3 891 aa24.06■■□□□ 1.44
IRF3-228ENST00000601291 RABGGTAQ92696 567 aa24.06■■□□□ 1.44
IRF3-228ENST00000601291 ELOVL4Q9GZR5 314 aa24.06■■□□□ 1.44
IRF3-228ENST00000601291 NENFQ9UMX5 172 aa24.06■■□□□ 1.44
IRF3-228ENST00000601291 ATP8B3O60423 1300 aa24.05■■□□□ 1.44
IRF3-228ENST00000601291 KRT86O43790 486 aa24.05■■□□□ 1.44
IRF3-228ENST00000601291 CALCAP01258 141 aa24.05■■□□□ 1.44
IRF3-228ENST00000601291 ODC1P11926 461 aa24.05■■□□□ 1.44
IRF3-228ENST00000601291 OR1G1P47890 313 aa24.05■■□□□ 1.44
IRF3-228ENST00000601291 KIF5AQ12840 1032 aa24.05■■□□□ 1.44
IRF3-228ENST00000601291 ZNF662Q6ZS27 426 aa24.05■■□□□ 1.44
IRF3-228ENST00000601291 PDCL2Q8N4E4 241 aa24.05■■□□□ 1.44
IRF3-228ENST00000601291 ZNF606Q8WXB4 792 aa24.05■■□□□ 1.44
IRF3-228ENST00000601291 BADQ92934 168 aa24.05■■□□□ 1.44
IRF3-228ENST00000601291 TWNKQ96RR1 684 aa24.05■■□□□ 1.44
IRF3-228ENST00000601291 LZTFL1Q9NQ48 299 aa24.05■■□□□ 1.44
IRF3-228ENST00000601291 KIAA1257Q9ULG3 409 aa24.05■■□□□ 1.44
IRF3-228ENST00000601291 ALPK3Q96L96 1907 aa24.05■■□□□ 1.44
IRF3-228ENST00000601291 A8MXQ7 604 aa24.04■■□□□ 1.44
IRF3-228ENST00000601291 TMEM189-UBE2V1I3L0A0 370 aa24.04■■□□□ 1.44
IRF3-228ENST00000601291 GZMAP12544 262 aa24.04■■□□□ 1.44
IRF3-228ENST00000601291 WARSP23381 471 aaKnown RBP24.04■■□□□ 1.44
IRF3-228ENST00000601291 BRD2P25440 801 aaKnown RBP24.04■■□□□ 1.44
IRF3-228ENST00000601291 WDR5P61964 334 aaKnown RBP24.04■■□□□ 1.44
IRF3-228ENST00000601291 KBTBD7Q8WVZ9 684 aa24.04■■□□□ 1.44
IRF3-228ENST00000601291 TOP1MTQ969P6 601 aa24.04■■□□□ 1.44
IRF3-228ENST00000601291 DGKIO75912 1065 aa24.03■■□□□ 1.44
IRF3-228ENST00000601291 KIF4AO95239 1232 aa24.03■■□□□ 1.44
IRF3-228ENST00000601291 VDRP11473 427 aa24.03■■□□□ 1.44
IRF3-228ENST00000601291 GNL1P36915 607 aaPredicted RBP24.03■■□□□ 1.44
IRF3-228ENST00000601291 ORC1Q13415 861 aa24.03■■□□□ 1.44
IRF3-228ENST00000601291 PAN2Q504Q3 1202 aaKnown RBP24.03■■□□□ 1.44
IRF3-228ENST00000601291 TIGD5Q53EQ6 642 aa24.03■■□□□ 1.44
IRF3-228ENST00000601291 PALB2Q86YC2 1186 aa24.03■■□□□ 1.44
IRF3-228ENST00000601291 HEXIM2Q96MH2 286 aaKnown RBP24.03■■□□□ 1.44
IRF3-228ENST00000601291 PCDHB18PQ96TA0 734 aa24.03■■□□□ 1.44
IRF3-228ENST00000601291 NRDE2Q9H7Z3 1164 aa24.03■■□□□ 1.44
IRF3-228ENST00000601291 INTUQ9ULD6 942 aa24.03■■□□□ 1.44
IRF3-228ENST00000601291 TMCO5BA8MYB1 307 aa24.03■■□□□ 1.44
IRF3-228ENST00000601291 B4GALT3O60512 393 aa24.03■■□□□ 1.44
IRF3-228ENST00000601291 H2AFZP0C0S5 128 aa24.03■■□□□ 1.44
IRF3-228ENST00000601291 SGO2Q562F6 1265 aa24.03■■□□□ 1.44
IRF3-228ENST00000601291 WSCD1Q658N2 575 aa24.03■■□□□ 1.44
IRF3-228ENST00000601291 PPP1R2P3Q6NXS1 205 aa24.03■■□□□ 1.44
IRF3-228ENST00000601291 H2AFVQ71UI9 128 aa24.03■■□□□ 1.44
IRF3-228ENST00000601291 SPATA18Q8TC71 538 aa24.03■■□□□ 1.44
IRF3-228ENST00000601291 HASPINQ8TF76 798 aa24.03■■□□□ 1.44
IRF3-228ENST00000601291 TMEM175Q9BSA9 504 aa24.03■■□□□ 1.44
IRF3-228ENST00000601291 DNAJB4Q9UDY4 337 aa24.03■■□□□ 1.44
IRF3-228ENST00000601291 DSEQ9UL01 958 aa24.03■■□□□ 1.44
IRF3-228ENST00000601291 STXBP5LQ9Y2K9 1186 aa24.03■■□□□ 1.44
IRF3-228ENST00000601291 M0QZQ0 153 aa24.02■■□□□ 1.44
IRF3-228ENST00000601291 RTN2O75298 545 aa24.02■■□□□ 1.44
IRF3-228ENST00000601291 FGBP02675 491 aa24.02■■□□□ 1.44
IRF3-228ENST00000601291 IGFBP6P24592 240 aaPredicted RBP24.02■■□□□ 1.44
IRF3-228ENST00000601291 LHX1P48742 406 aa24.02■■□□□ 1.44
IRF3-228ENST00000601291 STILQ15468 1287 aa24.02■■□□□ 1.44
IRF3-228ENST00000601291 PTPN14Q15678 1187 aa24.02■■□□□ 1.44
IRF3-228ENST00000601291 CLEC16AQ2KHT3 1053 aa24.02■■□□□ 1.44
IRF3-228ENST00000601291 METTL23Q86XA0 190 aa24.02■■□□□ 1.44
IRF3-228ENST00000601291 TFAP2BQ92481 460 aa24.02■■□□□ 1.44
IRF3-228ENST00000601291 ABHD8Q96I13 439 aa24.02■■□□□ 1.44
IRF3-228ENST00000601291 TNIP3Q96KP6 325 aa24.02■■□□□ 1.44
IRF3-228ENST00000601291 PCDHGC3Q9UN70 934 aa24.02■■□□□ 1.44
IRF3-228ENST00000601291 PRG3Q9Y2Y8 225 aaPredicted RBP24.02■■□□□ 1.44
IRF3-228ENST00000601291 CEP83Q9Y592 693 aa24.02■■□□□ 1.44
IRF3-228ENST00000601291 A0A0U1RQJ8 604 aa24.01■■□□□ 1.43
IRF3-228ENST00000601291 PJA2O43164 708 aa24.01■■□□□ 1.43
IRF3-228ENST00000601291 TRAPPC3O43617 180 aa24.01■■□□□ 1.43
IRF3-228ENST00000601291 LSM8O95777 96 aaKnown RBP24.01■■□□□ 1.43
IRF3-228ENST00000601291 ALDH2P05091 517 aa24.01■■□□□ 1.43
IRF3-228ENST00000601291 ARHGAP25P42331 645 aa24.01■■□□□ 1.43
IRF3-228ENST00000601291 BRCC3P46736 316 aa24.01■■□□□ 1.43
IRF3-228ENST00000601291 DEFB103AP81534 67 aa24.01■■□□□ 1.43
IRF3-228ENST00000601291 PSRC1Q6PGN9 363 aaPredicted RBP24.01■■□□□ 1.43
IRF3-228ENST00000601291 CD300LGQ6UXG3 332 aa24.01■■□□□ 1.43
IRF3-228ENST00000601291 OTOP2Q7RTS6 562 aa24.01■■□□□ 1.43
IRF3-228ENST00000601291 ATRIPQ8WXE1 791 aa24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms