RNA–Protein interactions for RNA: ENST00000600689.1

UPF1-210, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 2

Gene UPF1, Length 3,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-210ENST00000600689 DENND1AQ8TEH3 1009 aa19.36■□□□□ 0.69
UPF1-210ENST00000600689 PTPRN2Q92932 1015 aa19.36■□□□□ 0.69
UPF1-210ENST00000600689 TEKT3Q9BXF9 490 aa19.36■□□□□ 0.69
UPF1-210ENST00000600689 DCLRE1BQ9H816 532 aa19.36■□□□□ 0.69
UPF1-210ENST00000600689 ETAA1Q9NY74 926 aa19.36■□□□□ 0.69
UPF1-210ENST00000600689 LIN7AO14910 233 aaPredicted RBP19.35■□□□□ 0.69
UPF1-210ENST00000600689 TBX10O75333 385 aa19.35■□□□□ 0.69
UPF1-210ENST00000600689 POLR2MP0CAP2 368 aa19.35■□□□□ 0.69
UPF1-210ENST00000600689 SERPINB4P48594 390 aa19.35■□□□□ 0.69
UPF1-210ENST00000600689 NR1H3Q13133 447 aa19.35■□□□□ 0.69
UPF1-210ENST00000600689 ISLR2Q6UXK2 745 aa19.35■□□□□ 0.69
UPF1-210ENST00000600689 SLC25A41Q8N5S1 370 aa19.35■□□□□ 0.69
UPF1-210ENST00000600689 TTLL6Q8N841 843 aa19.35■□□□□ 0.69
UPF1-210ENST00000600689 TCP10LQ8TDR4 215 aa19.35■□□□□ 0.69
UPF1-210ENST00000600689 INPP5DQ92835 1189 aa19.35■□□□□ 0.69
UPF1-210ENST00000600689 HOMER2Q9NSB8 354 aa19.35■□□□□ 0.69
UPF1-210ENST00000600689 RAB20Q9NX57 234 aa19.35■□□□□ 0.69
UPF1-210ENST00000600689 HERC5Q9UII4 1024 aaKnown RBP19.35■□□□□ 0.69
UPF1-210ENST00000600689 SCOCQ9UIL1 159 aa19.35■□□□□ 0.69
UPF1-210ENST00000600689 MTA2O94776 668 aa19.35■□□□□ 0.69
UPF1-210ENST00000600689 TROVE2P10155 538 aaKnown RBP eCLIP19.35■□□□□ 0.69
UPF1-210ENST00000600689 MTMR2Q13614 643 aa19.35■□□□□ 0.69
UPF1-210ENST00000600689 RINLQ6ZS11 566 aa19.35■□□□□ 0.69
UPF1-210ENST00000600689 OGFOD1Q8N543 542 aa19.35■□□□□ 0.69
UPF1-210ENST00000600689 ZNF333Q96JL9 665 aa19.35■□□□□ 0.69
UPF1-210ENST00000600689 FESP07332 822 aa19.34■□□□□ 0.69
UPF1-210ENST00000600689 VHLP40337 213 aa19.34■□□□□ 0.69
UPF1-210ENST00000600689 CAV1Q03135 178 aa19.34■□□□□ 0.69
UPF1-210ENST00000600689 CLPTM1LQ96KA5 538 aa19.34■□□□□ 0.69
UPF1-210ENST00000600689 GMLQ99445 158 aa19.34■□□□□ 0.69
UPF1-210ENST00000600689 WDR11Q9BZH6 1224 aa19.34■□□□□ 0.69
UPF1-210ENST00000600689 TMX2Q9Y320 296 aa19.34■□□□□ 0.69
UPF1-210ENST00000600689 SEC23IPQ9Y6Y8 1000 aaKnown RBP19.34■□□□□ 0.69
UPF1-210ENST00000600689 SMAPO00193 183 aa19.34■□□□□ 0.69
UPF1-210ENST00000600689 SLC26A4O43511 780 aa19.34■□□□□ 0.69
UPF1-210ENST00000600689 AHCYL1O43865 530 aa19.34■□□□□ 0.69
UPF1-210ENST00000600689 GRIN3BO60391 1043 aa19.34■□□□□ 0.69
UPF1-210ENST00000600689 CACNA2D1P54289 1103 aa19.34■□□□□ 0.69
UPF1-210ENST00000600689 NRLP54845 237 aa19.34■□□□□ 0.69
UPF1-210ENST00000600689 SV2AQ7L0J3 742 aa19.34■□□□□ 0.69
UPF1-210ENST00000600689 FAM151AQ8WW52 585 aa19.34■□□□□ 0.69
UPF1-210ENST00000600689 DDX1Q92499 740 aaKnown RBP19.34■□□□□ 0.69
UPF1-210ENST00000600689 FAM161BQ96MY7 647 aa19.34■□□□□ 0.69
UPF1-210ENST00000600689 TTC1Q99614 292 aa19.34■□□□□ 0.69
UPF1-210ENST00000600689 VCXQ9H320 206 aa19.34■□□□□ 0.69
UPF1-210ENST00000600689 TMEM206Q9H813 350 aa19.34■□□□□ 0.69
UPF1-210ENST00000600689 PIK3CDO00329 1044 aa19.33■□□□□ 0.69
UPF1-210ENST00000600689 VIL1P09327 827 aaKnown RBP19.33■□□□□ 0.69
UPF1-210ENST00000600689 KITP10721 976 aa19.33■□□□□ 0.69
UPF1-210ENST00000600689 DPEP1P16444 411 aa19.33■□□□□ 0.69
UPF1-210ENST00000600689 ADSSP30520 456 aa19.33■□□□□ 0.69
UPF1-210ENST00000600689 NEK3P51956 506 aa19.33■□□□□ 0.69
UPF1-210ENST00000600689 CWF19L1Q69YN2 538 aaKnown RBP19.33■□□□□ 0.69
UPF1-210ENST00000600689 FBXL13Q8NEE6 735 aa19.33■□□□□ 0.69
UPF1-210ENST00000600689 KANSL3Q9P2N6 904 aa19.33■□□□□ 0.69
UPF1-210ENST00000600689 MARCOQ9UEW3 520 aaPredicted RBP19.33■□□□□ 0.69
UPF1-210ENST00000600689 ZHX2Q9Y6X8 837 aa19.33■□□□□ 0.69
UPF1-210ENST00000600689 TLR3O15455 904 aaKnown RBP19.33■□□□□ 0.69
UPF1-210ENST00000600689 KRT1P04264 644 aa19.33■□□□□ 0.69
UPF1-210ENST00000600689 ESRRAP11474 423 aaPredicted RBP19.33■□□□□ 0.69
UPF1-210ENST00000600689 AMPD1P23109 780 aa19.33■□□□□ 0.69
UPF1-210ENST00000600689 PPP2R5CQ13362 524 aa19.33■□□□□ 0.69
UPF1-210ENST00000600689 DGKZQ13574 1117 aa19.33■□□□□ 0.69
UPF1-210ENST00000600689 NFIL3Q16649 462 aa19.33■□□□□ 0.69
UPF1-210ENST00000600689 WASHC2DQ5SRD0 308 aa19.33■□□□□ 0.69
UPF1-210ENST00000600689 MFSD7Q6UXD7 560 aa19.33■□□□□ 0.69
UPF1-210ENST00000600689 ZCCHC9Q8N567 271 aaKnown RBP19.33■□□□□ 0.69
UPF1-210ENST00000600689 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.33■□□□□ 0.69
UPF1-210ENST00000600689 MAN1A1P33908 653 aa19.33■□□□□ 0.68
UPF1-210ENST00000600689 RPL7AP62424 266 aaKnown RBP19.33■□□□□ 0.68
UPF1-210ENST00000600689 BBS9Q3SYG4 887 aa19.33■□□□□ 0.68
UPF1-210ENST00000600689 TXNRD3NBQ6F5E7 133 aa19.33■□□□□ 0.68
UPF1-210ENST00000600689 LRRC74BQ6ZQY2 392 aa19.33■□□□□ 0.68
UPF1-210ENST00000600689 SLC9A9Q8IVB4 645 aa19.33■□□□□ 0.68
UPF1-210ENST00000600689 FBXO41Q8TF61 875 aa19.33■□□□□ 0.68
UPF1-210ENST00000600689 MAIP1Q8WWC4 291 aa19.33■□□□□ 0.68
UPF1-210ENST00000600689 SLCO2A1Q92959 643 aa19.33■□□□□ 0.68
UPF1-210ENST00000600689 BICD1Q96G01 975 aa19.33■□□□□ 0.68
UPF1-210ENST00000600689 FGD4Q96M96 766 aa19.33■□□□□ 0.68
UPF1-210ENST00000600689 FAM213AQ9BRX8 229 aa19.33■□□□□ 0.68
UPF1-210ENST00000600689 MOV10L1Q9BXT6 1211 aaKnown RBP19.33■□□□□ 0.68
UPF1-210ENST00000600689 GINM1Q9NU53 330 aa19.33■□□□□ 0.68
UPF1-210ENST00000600689 EURLQ9NYK6 297 aa19.33■□□□□ 0.68
UPF1-210ENST00000600689 STK24Q9Y6E0 443 aa19.33■□□□□ 0.68
UPF1-210ENST00000600689 ETS2P15036 469 aa19.32■□□□□ 0.68
UPF1-210ENST00000600689 ACADSP16219 412 aa19.32■□□□□ 0.68
UPF1-210ENST00000600689 DSG3P32926 999 aa19.32■□□□□ 0.68
UPF1-210ENST00000600689 ARFIP2P53365 341 aa19.32■□□□□ 0.68
UPF1-210ENST00000600689 CCNG2Q16589 344 aa19.32■□□□□ 0.68
UPF1-210ENST00000600689 FOXB2Q5VYV0 432 aa19.32■□□□□ 0.68
UPF1-210ENST00000600689 CCDC195A0A1B0GUA6 201 aa19.32■□□□□ 0.68
UPF1-210ENST00000600689 GSC2O15499 205 aa19.32■□□□□ 0.68
UPF1-210ENST00000600689 USP1O94782 785 aa19.32■□□□□ 0.68
UPF1-210ENST00000600689 SKIP12755 728 aa19.32■□□□□ 0.68
UPF1-210ENST00000600689 RHOT1Q8IXI2 618 aa19.32■□□□□ 0.68
UPF1-210ENST00000600689 FBXO27Q8NI29 283 aa19.32■□□□□ 0.68
UPF1-210ENST00000600689 IRAK4Q9NWZ3 460 aa19.32■□□□□ 0.68
UPF1-210ENST00000600689 ANKFY1Q9P2R3 1169 aa19.32■□□□□ 0.68
UPF1-210ENST00000600689 TCEAL9Q9UHQ7 104 aa19.32■□□□□ 0.68
UPF1-210ENST00000600689 TCEA3O75764 348 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms