RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 NRG2O14511 850 aaPredicted RBP9.46□□□□□ -0.9
SSBP4-208ENST00000600628 MOSPD3O75425 235 aa9.46□□□□□ -0.9
SSBP4-208ENST00000600628 AKAP3O75969 853 aa9.46□□□□□ -0.9
SSBP4-208ENST00000600628 KIF20AO95235 890 aa9.46□□□□□ -0.9
SSBP4-208ENST00000600628 PRCPP42785 496 aa9.46□□□□□ -0.9
SSBP4-208ENST00000600628 UBE2HP62256 183 aa9.46□□□□□ -0.9
SSBP4-208ENST00000600628 ZXDAP98168 799 aa9.46□□□□□ -0.9
SSBP4-208ENST00000600628 SMARCB1Q12824 385 aa9.46□□□□□ -0.9
SSBP4-208ENST00000600628 ZACNQ401N2 412 aa9.46□□□□□ -0.9
SSBP4-208ENST00000600628 ZNF658Q5TYW1 1059 aaPredicted RBP9.46□□□□□ -0.9
SSBP4-208ENST00000600628 LMBRD2Q68DH5 695 aaPredicted RBP9.46□□□□□ -0.9
SSBP4-208ENST00000600628 OTOP3Q7RTS5 596 aa9.46□□□□□ -0.9
SSBP4-208ENST00000600628 ADSSL1Q8N142 457 aa9.46□□□□□ -0.9
SSBP4-208ENST00000600628 PDCL2Q8N4E4 241 aa9.46□□□□□ -0.9
SSBP4-208ENST00000600628 CSGALNACT2Q8N6G5 542 aa9.46□□□□□ -0.9
SSBP4-208ENST00000600628 TDRD5Q8NAT2 981 aaKnown RBP9.46□□□□□ -0.9
SSBP4-208ENST00000600628 MYADMQ96S97 322 aa9.46□□□□□ -0.9
SSBP4-208ENST00000600628 ACBD6Q9BR61 282 aa9.46□□□□□ -0.9
SSBP4-208ENST00000600628 MKNK1Q9BUB5 465 aa9.46□□□□□ -0.9
SSBP4-208ENST00000600628 GTPBP4Q9BZE4 634 aaKnown RBP9.46□□□□□ -0.9
SSBP4-208ENST00000600628 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.46□□□□□ -0.91e-8■■■■□ 21.5
SSBP4-208ENST00000600628 DNMT3BQ9UBC3 853 aaKnown RBP9.46□□□□□ -0.9
SSBP4-208ENST00000600628 NME7Q9Y5B8 376 aa9.46□□□□□ -0.9
SSBP4-208ENST00000600628 INSL5Q9Y5Q6 135 aa9.46□□□□□ -0.9
SSBP4-208ENST00000600628 ZFP37Q9Y6Q3 630 aaPredicted RBP9.46□□□□□ -0.9
SSBP4-208ENST00000600628 CACNA1HO95180 2353 aa9.46□□□□□ -0.9
SSBP4-208ENST00000600628 ANAPC1Q9H1A4 1944 aa9.46□□□□□ -0.9
SSBP4-208ENST00000600628 COL4A2P08572 1712 aa9.45□□□□□ -0.9
SSBP4-208ENST00000600628 NUP210Q8TEM1 1887 aaPredicted RBP9.45□□□□□ -0.9
SSBP4-208ENST00000600628 EXOC3O60645 756 aa9.45□□□□□ -0.9
SSBP4-208ENST00000600628 TACC1O75410 805 aa9.45□□□□□ -0.9
SSBP4-208ENST00000600628 VNN1O95497 513 aa9.45□□□□□ -0.9
SSBP4-208ENST00000600628 OR4Q2P0C623 313 aa9.45□□□□□ -0.9
SSBP4-208ENST00000600628 CD44P16070 742 aaKnown RBP9.45□□□□□ -0.9
SSBP4-208ENST00000600628 AP3M2P53677 418 aa9.45□□□□□ -0.9
SSBP4-208ENST00000600628 DLG4P78352 724 aa9.45□□□□□ -0.9
SSBP4-208ENST00000600628 MORC3Q14149 939 aa9.45□□□□□ -0.9
SSBP4-208ENST00000600628 PTPN21Q16825 1174 aa9.45□□□□□ -0.9
SSBP4-208ENST00000600628 SLC5A9Q2M3M2 681 aa9.45□□□□□ -0.9
SSBP4-208ENST00000600628 PPM1LQ5SGD2 360 aa9.45□□□□□ -0.9
SSBP4-208ENST00000600628 TDRD10Q5VZ19 366 aaKnown RBP9.45□□□□□ -0.9
SSBP4-208ENST00000600628 FAM171BQ6P995 826 aa9.45□□□□□ -0.9
SSBP4-208ENST00000600628 DSTYKQ6XUX3 929 aa9.45□□□□□ -0.9
SSBP4-208ENST00000600628 TRIM67Q6ZTA4 783 aa9.45□□□□□ -0.9
SSBP4-208ENST00000600628 BMP8AQ7Z5Y6 402 aa9.45□□□□□ -0.9
SSBP4-208ENST00000600628 USP37Q86T82 979 aa9.45□□□□□ -0.9
SSBP4-208ENST00000600628 OSTM1Q86WC4 334 aa9.45□□□□□ -0.9
SSBP4-208ENST00000600628 TMC8Q8IU68 726 aa9.45□□□□□ -0.9
SSBP4-208ENST00000600628 SMYD4Q8IYR2 804 aaPredicted RBP9.45□□□□□ -0.9
SSBP4-208ENST00000600628 RDH13Q8NBN7 331 aa9.45□□□□□ -0.9
SSBP4-208ENST00000600628 C2orf15Q8WU43 125 aaKnown RBP9.45□□□□□ -0.9
SSBP4-208ENST00000600628 ACSF2Q96CM8 615 aaPredicted RBP9.45□□□□□ -0.9
SSBP4-208ENST00000600628 ASIC4Q96FT7 647 aa9.45□□□□□ -0.9
SSBP4-208ENST00000600628 CCDC34Q96HJ3 373 aa9.45□□□□□ -0.9
SSBP4-208ENST00000600628 ANKRD36BP1Q96IX9 119 aa9.45□□□□□ -0.9
SSBP4-208ENST00000600628 PIDD1Q9HB75 910 aa9.45□□□□□ -0.9
SSBP4-208ENST00000600628 RMND1Q9NWS8 449 aa9.45□□□□□ -0.9
SSBP4-208ENST00000600628 HCFC1R1Q9NWW0 138 aa9.45□□□□□ -0.9
SSBP4-208ENST00000600628 CEP72Q9P209 647 aa9.45□□□□□ -0.9
SSBP4-208ENST00000600628 LIMD1Q9UGP4 676 aa9.45□□□□□ -0.9
SSBP4-208ENST00000600628 FRYLO94915 3013 aa9.45□□□□□ -0.9
SSBP4-208ENST00000600628 KMT2EQ8IZD2 1858 aa9.45□□□□□ -0.9
SSBP4-208ENST00000600628 GOLGA6L4A6NEF3 574 aa9.44□□□□□ -0.9
SSBP4-208ENST00000600628 PPP1R3GB7ZBB8 358 aa9.44□□□□□ -0.9
SSBP4-208ENST00000600628 CCL16O15467 120 aa9.44□□□□□ -0.9
SSBP4-208ENST00000600628 XYLBO75191 536 aa9.44□□□□□ -0.9
SSBP4-208ENST00000600628 TMEM191BP0C7N4 346 aa9.44□□□□□ -0.9
SSBP4-208ENST00000600628 DLATP10515 647 aaKnown RBP9.44□□□□□ -0.9
SSBP4-208ENST00000600628 LAMP2P13473 410 aa9.44□□□□□ -0.9
SSBP4-208ENST00000600628 WARSP23381 471 aaKnown RBP9.44□□□□□ -0.9
SSBP4-208ENST00000600628 NR2F2P24468 414 aa9.44□□□□□ -0.9
SSBP4-208ENST00000600628 ATICP31939 592 aa9.44□□□□□ -0.9
SSBP4-208ENST00000600628 CCR2P41597 374 aa9.44□□□□□ -0.9
SSBP4-208ENST00000600628 LHX1P48742 406 aa9.44□□□□□ -0.9
SSBP4-208ENST00000600628 PMS1P54277 932 aaKnown RBP9.44□□□□□ -0.9
SSBP4-208ENST00000600628 NTHL1P78549 312 aa9.44□□□□□ -0.9
SSBP4-208ENST00000600628 ADCY1Q08828 1119 aa9.44□□□□□ -0.9
SSBP4-208ENST00000600628 SIGLEC14Q08ET2 396 aa9.44□□□□□ -0.9
SSBP4-208ENST00000600628 HTR4Q13639 388 aa9.44□□□□□ -0.9
SSBP4-208ENST00000600628 CFAP221Q4G0U5 840 aa9.44□□□□□ -0.9
SSBP4-208ENST00000600628 LIN9Q5TKA1 542 aa9.44□□□□□ -0.9
SSBP4-208ENST00000600628 SV2AQ7L0J3 742 aa9.44□□□□□ -0.9
SSBP4-208ENST00000600628 GRASPQ7Z6J2 395 aaPredicted RBP9.44□□□□□ -0.9
SSBP4-208ENST00000600628 TTC9BQ8N6N2 239 aa9.44□□□□□ -0.9
SSBP4-208ENST00000600628 ATAD1Q8NBU5 361 aa9.44□□□□□ -0.9
SSBP4-208ENST00000600628 ERCC4Q92889 916 aaPredicted RBP9.44□□□□□ -0.9
SSBP4-208ENST00000600628 NXPE3Q969Y0 559 aa9.44□□□□□ -0.9
SSBP4-208ENST00000600628 CCDC47Q96A33 483 aaKnown RBP9.44□□□□□ -0.9
SSBP4-208ENST00000600628 HPDLQ96IR7 371 aa9.44□□□□□ -0.9
SSBP4-208ENST00000600628 FNBP1Q96RU3 617 aa9.44□□□□□ -0.9
SSBP4-208ENST00000600628 KCNK12Q9HB15 430 aa9.44□□□□□ -0.9
SSBP4-208ENST00000600628 CYP4F11Q9HBI6 524 aa9.44□□□□□ -0.9
SSBP4-208ENST00000600628 ABCB6Q9NP58 842 aa9.44□□□□□ -0.9
SSBP4-208ENST00000600628 TMLHEQ9NVH6 421 aa9.44□□□□□ -0.9
SSBP4-208ENST00000600628 MAN1B1Q9UKM7 699 aa9.44□□□□□ -0.9
SSBP4-208ENST00000600628 CDH7Q9ULB5 785 aa9.44□□□□□ -0.9
SSBP4-208ENST00000600628 SORCS3Q9UPU3 1222 aa9.44□□□□□ -0.9
SSBP4-208ENST00000600628 MAPK8IP1Q9UQF2 711 aa9.44□□□□□ -0.9
SSBP4-208ENST00000600628 YIPF1Q9Y548 306 aa9.44□□□□□ -0.9
SSBP4-208ENST00000600628 ASB3Q9Y575 518 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms