RNA–Protein interactions for RNA: ENST00000600077.5

HOMER3-212, Transcript of homer scaffold protein 3, humanhuman

TSL 3

Gene HOMER3, Length 675 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-212ENST00000600077 HOXD12P35452 270 aa15□□□□□ -0.01
HOMER3-212ENST00000600077 GALK1P51570 392 aa15□□□□□ -0.01
HOMER3-212ENST00000600077 CTTNQ14247 550 aaKnown RBP15□□□□□ -0.01
HOMER3-212ENST00000600077 C8orf34Q49A92 452 aa15□□□□□ -0.01
HOMER3-212ENST00000600077 LMBRD2Q68DH5 695 aaPredicted RBP15□□□□□ -0.01
HOMER3-212ENST00000600077 CDCA2Q69YH5 1023 aaPredicted RBP15□□□□□ -0.01
HOMER3-212ENST00000600077 RNF19BQ6ZMZ0 732 aa15□□□□□ -0.01
HOMER3-212ENST00000600077 PIK3AP1Q6ZUJ8 805 aa15□□□□□ -0.01
HOMER3-212ENST00000600077 GAREM2Q75VX8 874 aa15□□□□□ -0.01
HOMER3-212ENST00000600077 ZNF605Q86T29 641 aa15□□□□□ -0.01
HOMER3-212ENST00000600077 TPH2Q8IWU9 490 aa15□□□□□ -0.01
HOMER3-212ENST00000600077 NSUN7Q8NE18 718 aaKnown RBP15□□□□□ -0.01
HOMER3-212ENST00000600077 BEST2Q8NFU1 509 aa15□□□□□ -0.01
HOMER3-212ENST00000600077 CNOT6LQ96LI5 555 aaKnown RBP15□□□□□ -0.01
HOMER3-212ENST00000600077 KCNMB3Q9NPA1 279 aa15□□□□□ -0.01
HOMER3-212ENST00000600077 GJB4Q9NTQ9 266 aa15□□□□□ -0.01
HOMER3-212ENST00000600077 ASXL3Q9C0F0 2248 aa14.99□□□□□ -0.01
HOMER3-212ENST00000600077 SMIM28A0A1B0GU29 152 aa14.99□□□□□ -0.01
HOMER3-212ENST00000600077 ACKR2O00590 384 aa14.99□□□□□ -0.01
HOMER3-212ENST00000600077 SLC37A4O43826 429 aa14.99□□□□□ -0.01
HOMER3-212ENST00000600077 MARCH6O60337 910 aa14.99□□□□□ -0.01
HOMER3-212ENST00000600077 LYPLA2O95372 231 aa14.99□□□□□ -0.01
HOMER3-212ENST00000600077 PRAMEF12O95522 483 aa14.99□□□□□ -0.01
HOMER3-212ENST00000600077 PLA2G2AP14555 144 aa14.99□□□□□ -0.01
HOMER3-212ENST00000600077 BCKDHBP21953 392 aa14.99□□□□□ -0.01
HOMER3-212ENST00000600077 GABRR2P28476 465 aa14.99□□□□□ -0.01
HOMER3-212ENST00000600077 RPL9P32969 192 aaKnown RBP14.99□□□□□ -0.01
HOMER3-212ENST00000600077 SPDYCQ5MJ68 293 aa14.99□□□□□ -0.01
HOMER3-212ENST00000600077 ITIH5Q86UX2 942 aa14.99□□□□□ -0.01
HOMER3-212ENST00000600077 RASSF3Q86WH2 238 aa14.99□□□□□ -0.01
HOMER3-212ENST00000600077 CEP76Q8TAP6 659 aa14.99□□□□□ -0.01
HOMER3-212ENST00000600077 MDM1Q8TC05 714 aa14.99□□□□□ -0.01
HOMER3-212ENST00000600077 SLC39A7Q92504 469 aa14.99□□□□□ -0.01
HOMER3-212ENST00000600077 SUSD3Q96L08 255 aa14.99□□□□□ -0.01
HOMER3-212ENST00000600077 TPSD1Q9BZJ3 242 aa14.99□□□□□ -0.01
HOMER3-212ENST00000600077 DNAJC25Q9H1X3 360 aa14.99□□□□□ -0.01
HOMER3-212ENST00000600077 HPS4Q9NQG7 708 aa14.99□□□□□ -0.01
HOMER3-212ENST00000600077 TOPORSQ9NS56 1045 aaPredicted RBP14.99□□□□□ -0.01
HOMER3-212ENST00000600077 LIMCH1Q9UPQ0 1083 aa14.99□□□□□ -0.01
HOMER3-212ENST00000600077 PCDHB9Q9Y5E1 797 aa14.99□□□□□ -0.01
HOMER3-212ENST00000600077 BPTFQ12830 3046 aa14.99□□□□□ -0.01
HOMER3-212ENST00000600077 MAP3K13O43283 966 aa14.98□□□□□ -0.01
HOMER3-212ENST00000600077 CCNT1O60563 726 aaKnown RBP14.98□□□□□ -0.01
HOMER3-212ENST00000600077 JAK2O60674 1132 aa14.98□□□□□ -0.01
HOMER3-212ENST00000600077 SLITRK3O94933 977 aa14.98□□□□□ -0.01
HOMER3-212ENST00000600077 FDPSP14324 419 aaKnown RBP14.98□□□□□ -0.01
HOMER3-212ENST00000600077 MARCKSP29966 332 aaPredicted RBP14.98□□□□□ -0.01
HOMER3-212ENST00000600077 FOSBP53539 338 aa14.98□□□□□ -0.01
HOMER3-212ENST00000600077 YARSP54577 528 aaKnown RBP14.98□□□□□ -0.01
HOMER3-212ENST00000600077 FAM193AP78312 1265 aa14.98□□□□□ -0.01
HOMER3-212ENST00000600077 GFPT1Q06210 699 aaPredicted RBP14.98□□□□□ -0.01
HOMER3-212ENST00000600077 TRIP6Q15654 476 aaKnown RBP14.98□□□□□ -0.01
HOMER3-212ENST00000600077 NCAPH2Q6IBW4 605 aa14.98□□□□□ -0.01
HOMER3-212ENST00000600077 DNAJB7Q7Z6W7 309 aaPredicted RBP14.98□□□□□ -0.01
HOMER3-212ENST00000600077 LSM14AQ8ND56 463 aaKnown RBP14.98□□□□□ -0.01
HOMER3-212ENST00000600077 OXER1Q8TDS5 423 aa14.98□□□□□ -0.01
HOMER3-212ENST00000600077 DDX12PQ92771 950 aa14.98□□□□□ -0.01
HOMER3-212ENST00000600077 PSMG2Q969U7 264 aa14.98□□□□□ -0.01
HOMER3-212ENST00000600077 SPACA7Q96KW9 195 aa14.98□□□□□ -0.01
HOMER3-212ENST00000600077 GCNAQ96QF7 691 aa14.98□□□□□ -0.01
HOMER3-212ENST00000600077 EBF3Q9H4W6 596 aa14.98□□□□□ -0.01
HOMER3-212ENST00000600077 UPF2Q9HAU5 1272 aaKnown RBP14.98□□□□□ -0.01
HOMER3-212ENST00000600077 FBRSL1Q9HCM7 1045 aaKnown RBP14.98□□□□□ -0.01
HOMER3-212ENST00000600077 MBD1Q9UIS9 605 aaPredicted RBP14.98□□□□□ -0.01
HOMER3-212ENST00000600077 SLC6A14Q9UN76 642 aa14.98□□□□□ -0.01
HOMER3-212ENST00000600077 RAI2Q9Y5P3 530 aa14.98□□□□□ -0.01
HOMER3-212ENST00000600077 TTLL13PA6NNM8 815 aa14.97□□□□□ -0.01
HOMER3-212ENST00000600077 CYSRT1A8MQ03 144 aa14.97□□□□□ -0.01
HOMER3-212ENST00000600077 PRB1P04280 392 aa14.97□□□□□ -0.01
HOMER3-212ENST00000600077 CDC25CP30307 473 aa14.97□□□□□ -0.01
HOMER3-212ENST00000600077 SOX4Q06945 474 aaPredicted RBP14.97□□□□□ -0.01
HOMER3-212ENST00000600077 DUSP4Q13115 394 aa14.97□□□□□ -0.01
HOMER3-212ENST00000600077 PSMD2Q13200 908 aa14.97□□□□□ -0.01
HOMER3-212ENST00000600077 SLC14A1Q13336 389 aa14.97□□□□□ -0.01
HOMER3-212ENST00000600077 DUOXA1Q1HG43 343 aa14.97□□□□□ -0.01
HOMER3-212ENST00000600077 ANO7Q6IWH7 933 aa14.97□□□□□ -0.01
HOMER3-212ENST00000600077 CC2D1AQ6P1N0 951 aaPredicted RBP14.97□□□□□ -0.01
HOMER3-212ENST00000600077 RABEPKQ7Z6M1 372 aa14.97□□□□□ -0.01
HOMER3-212ENST00000600077 CCDC83Q8IWF9 413 aa14.97□□□□□ -0.01
HOMER3-212ENST00000600077 SCUBE3Q8IX30 993 aa14.97□□□□□ -0.01
HOMER3-212ENST00000600077 CHFRQ96EP1 664 aa14.97□□□□□ -0.01
HOMER3-212ENST00000600077 TBC1D32Q96NH3 1257 aa14.97□□□□□ -0.01
HOMER3-212ENST00000600077 GTPBP2Q9BX10 602 aaKnown RBP14.97□□□□□ -0.01
HOMER3-212ENST00000600077 TBX20Q9UMR3 447 aa14.97□□□□□ -0.01
HOMER3-212ENST00000600077 APOBEC2Q9Y235 224 aaKnown RBP14.97□□□□□ -0.01
HOMER3-212ENST00000600077 URB1O60287 2271 aaKnown RBP14.97□□□□□ -0.01
HOMER3-212ENST00000600077 APC2O95996 2303 aa14.97□□□□□ -0.01
HOMER3-212ENST00000600077 A0A087WV48 116 aa14.96□□□□□ -0.01
HOMER3-212ENST00000600077 OTOL1A6NHN0 477 aaPredicted RBP14.96□□□□□ -0.01
HOMER3-212ENST00000600077 ALDH1A2O94788 518 aa14.96□□□□□ -0.01
HOMER3-212ENST00000600077 CFIP05156 583 aa14.96□□□□□ -0.01
HOMER3-212ENST00000600077 FTH1P19P0C7X4 201 aa14.96□□□□□ -0.01
HOMER3-212ENST00000600077 MCM4P33991 863 aa14.96□□□□□ -0.01
HOMER3-212ENST00000600077 RARRES1P49788 294 aa14.96□□□□□ -0.01
HOMER3-212ENST00000600077 NR5A1Q13285 461 aa14.96□□□□□ -0.01
HOMER3-212ENST00000600077 BYSLQ13895 437 aaKnown RBP14.96□□□□□ -0.01
HOMER3-212ENST00000600077 PDGFRLQ15198 375 aa14.96□□□□□ -0.01
HOMER3-212ENST00000600077 SAFBQ15424 915 aaKnown RBP eCLIP14.96□□□□□ -0.01
HOMER3-212ENST00000600077 XKR4Q5GH76 650 aa14.96□□□□□ -0.01
HOMER3-212ENST00000600077 PEAR1Q5VY43 1037 aaPredicted RBP14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms