RNA–Protein interactions for RNA: ENST00000599016.5

LTBP4-224, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 726 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-224ENST00000599016 CISHQ9NSE2 258 aa23.37■■□□□ 1.33
LTBP4-224ENST00000599016 STK39Q9UEW8 545 aa23.37■■□□□ 1.33
LTBP4-224ENST00000599016 CDH23Q9H251 3354 aa23.37■■□□□ 1.33
LTBP4-224ENST00000599016 CYP11A1P05108 521 aa23.36■■□□□ 1.33
LTBP4-224ENST00000599016 KRT5P13647 590 aa23.36■■□□□ 1.33
LTBP4-224ENST00000599016 WARSP23381 471 aaKnown RBP23.36■■□□□ 1.33
LTBP4-224ENST00000599016 CTNNB1P35222 781 aa23.36■■□□□ 1.33
LTBP4-224ENST00000599016 KRT9P35527 623 aa23.36■■□□□ 1.33
LTBP4-224ENST00000599016 BMPR1AP36894 532 aa23.36■■□□□ 1.33
LTBP4-224ENST00000599016 USP8P40818 1118 aa23.36■■□□□ 1.33
LTBP4-224ENST00000599016 CDH8P55286 799 aa23.36■■□□□ 1.33
LTBP4-224ENST00000599016 JAM2P57087 298 aa23.36■■□□□ 1.33
LTBP4-224ENST00000599016 KRT17Q04695 432 aa23.36■■□□□ 1.33
LTBP4-224ENST00000599016 FAM171A1Q5VUB5 890 aa23.36■■□□□ 1.33
LTBP4-224ENST00000599016 WSCD1Q658N2 575 aa23.36■■□□□ 1.33
LTBP4-224ENST00000599016 PDCL2Q8N4E4 241 aa23.36■■□□□ 1.33
LTBP4-224ENST00000599016 BAP1Q92560 729 aa23.36■■□□□ 1.33
LTBP4-224ENST00000599016 SAMD11Q96NU1 681 aa23.36■■□□□ 1.33
LTBP4-224ENST00000599016 SDCBP2Q9H190 292 aa23.36■■□□□ 1.33
LTBP4-224ENST00000599016 RAPGEFL1Q9UHV5 662 aa23.36■■□□□ 1.33
LTBP4-224ENST00000599016 BARX2Q9UMQ3 279 aaPredicted RBP23.36■■□□□ 1.33
LTBP4-224ENST00000599016 TSC2P49815 1807 aa23.36■■□□□ 1.33
LTBP4-224ENST00000599016 PRUNE2Q8WUY3 3088 aa23.35■■□□□ 1.33
LTBP4-224ENST00000599016 LRRC53A6NM62 1247 aa23.35■■□□□ 1.33
LTBP4-224ENST00000599016 F8VZ95 297 aa23.35■■□□□ 1.33
LTBP4-224ENST00000599016 FOXN3O00409 490 aaPredicted RBP23.35■■□□□ 1.33
LTBP4-224ENST00000599016 MFAP3LO75121 409 aa23.35■■□□□ 1.33
LTBP4-224ENST00000599016 CA3P07451 260 aa23.35■■□□□ 1.33
LTBP4-224ENST00000599016 CCDC172P0C7W6 258 aa23.35■■□□□ 1.33
LTBP4-224ENST00000599016 MYOGP15173 224 aa23.35■■□□□ 1.33
LTBP4-224ENST00000599016 SOX5P35711 763 aa23.35■■□□□ 1.33
LTBP4-224ENST00000599016 LHX1P48742 406 aa23.35■■□□□ 1.33
LTBP4-224ENST00000599016 GSDMDP57764 484 aa23.35■■□□□ 1.33
LTBP4-224ENST00000599016 INCA1Q0VD86 236 aa23.35■■□□□ 1.33
LTBP4-224ENST00000599016 CCDC173Q0VFZ6 552 aa23.35■■□□□ 1.33
LTBP4-224ENST00000599016 SFMBT2Q5VUG0 894 aa23.35■■□□□ 1.33
LTBP4-224ENST00000599016 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.35■■□□□ 1.33
LTBP4-224ENST00000599016 TMEM173Q86WV6 379 aaPredicted RBP23.35■■□□□ 1.33
LTBP4-224ENST00000599016 UBR7Q8N806 425 aa23.35■■□□□ 1.33
LTBP4-224ENST00000599016 OR6B3Q8NGW1 331 aa23.35■■□□□ 1.33
LTBP4-224ENST00000599016 BCL7CQ8WUZ0 217 aaPredicted RBP23.35■■□□□ 1.33
LTBP4-224ENST00000599016 PDLIM2Q96JY6 352 aa23.35■■□□□ 1.33
LTBP4-224ENST00000599016 MRPL45Q9BRJ2 306 aaKnown RBP23.35■■□□□ 1.33
LTBP4-224ENST00000599016 PLVAPQ9BX97 442 aa23.35■■□□□ 1.33
LTBP4-224ENST00000599016 GPR62Q9BZJ7 368 aa23.35■■□□□ 1.33
LTBP4-224ENST00000599016 VWA8A3KMH1 1905 aa23.34■■□□□ 1.33
LTBP4-224ENST00000599016 LINC00271P0C7V0 271 aa23.34■■□□□ 1.33
LTBP4-224ENST00000599016 ACO1P21399 889 aaKnown RBP23.34■■□□□ 1.33
LTBP4-224ENST00000599016 GNL1P36915 607 aaPredicted RBP23.34■■□□□ 1.33
LTBP4-224ENST00000599016 USP41Q3LFD5 358 aa23.34■■□□□ 1.33
LTBP4-224ENST00000599016 TMEM270Q6UE05 265 aa23.34■■□□□ 1.33
LTBP4-224ENST00000599016 DDX53Q86TM3 631 aaKnown RBP23.34■■□□□ 1.33
LTBP4-224ENST00000599016 UNC93AQ86WB7 457 aa23.34■■□□□ 1.33
LTBP4-224ENST00000599016 CEP57Q86XR8 500 aa23.34■■□□□ 1.33
LTBP4-224ENST00000599016 THEM5Q8N1Q8 247 aa23.34■■□□□ 1.33
LTBP4-224ENST00000599016 OR8K1Q8NGG5 319 aa23.34■■□□□ 1.33
LTBP4-224ENST00000599016 TGS1Q96RS0 853 aaKnown RBP23.34■■□□□ 1.33
LTBP4-224ENST00000599016 ZNHIT6Q9NWK9 470 aaKnown RBP23.34■■□□□ 1.33
LTBP4-224ENST00000599016 TIMM13Q9Y5L4 95 aaPredicted RBP23.34■■□□□ 1.33
LTBP4-224ENST00000599016 A8MXQ7 604 aa23.33■■□□□ 1.33
LTBP4-224ENST00000599016 RNF225M0QZC1 329 aaPredicted RBP23.33■■□□□ 1.33
LTBP4-224ENST00000599016 CILPO75339 1184 aa23.33■■□□□ 1.33
LTBP4-224ENST00000599016 FGF18O76093 207 aa23.33■■□□□ 1.33
LTBP4-224ENST00000599016 RB1P06400 928 aa23.33■■□□□ 1.33
LTBP4-224ENST00000599016 FERP16591 822 aa23.33■■□□□ 1.33
LTBP4-224ENST00000599016 TKTP29401 623 aaKnown RBP23.33■■□□□ 1.33
LTBP4-224ENST00000599016 ADKP55263 362 aaKnown RBP23.33■■□□□ 1.33
LTBP4-224ENST00000599016 BPIFB4P59827 614 aa23.33■■□□□ 1.33
LTBP4-224ENST00000599016 PLCB3Q01970 1234 aa23.33■■□□□ 1.33
LTBP4-224ENST00000599016 OVOS1Q6IE37 1185 aa23.33■■□□□ 1.33
LTBP4-224ENST00000599016 FAM71AQ8IYT1 594 aa23.33■■□□□ 1.33
LTBP4-224ENST00000599016 RBBP8NLQ8NC74 664 aaPredicted RBP23.33■■□□□ 1.33
LTBP4-224ENST00000599016 KBTBD7Q8WVZ9 684 aa23.33■■□□□ 1.33
LTBP4-224ENST00000599016 SYN2Q92777 582 aaPredicted RBP23.33■■□□□ 1.33
LTBP4-224ENST00000599016 TTPALQ9BTX7 342 aa23.33■■□□□ 1.33
LTBP4-224ENST00000599016 PBX4Q9BYU1 374 aa23.33■■□□□ 1.33
LTBP4-224ENST00000599016 GPR88Q9GZN0 384 aa23.33■■□□□ 1.33
LTBP4-224ENST00000599016 CNTN6Q9UQ52 1028 aa23.33■■□□□ 1.33
LTBP4-224ENST00000599016 YBX2Q9Y2T7 364 aaKnown RBP23.33■■□□□ 1.33
LTBP4-224ENST00000599016 GFPT2O94808 682 aa23.32■■□□□ 1.32
LTBP4-224ENST00000599016 SOD2P04179 222 aa23.32■■□□□ 1.32
LTBP4-224ENST00000599016 PTMAP06454 111 aaKnown RBP23.32■■□□□ 1.32
LTBP4-224ENST00000599016 FGFR3P22607 806 aa23.32■■□□□ 1.32
LTBP4-224ENST00000599016 PBX2P40425 430 aa23.32■■□□□ 1.32
LTBP4-224ENST00000599016 NDST1P52848 882 aa23.32■■□□□ 1.32
LTBP4-224ENST00000599016 YWHAHQ04917 246 aaPredicted RBP23.32■■□□□ 1.32
LTBP4-224ENST00000599016 ASIC2Q16515 512 aa23.32■■□□□ 1.32
LTBP4-224ENST00000599016 KLHL23Q8NBE8 558 aa23.32■■□□□ 1.32
LTBP4-224ENST00000599016 DNAJC7Q99615 494 aa23.32■■□□□ 1.32
LTBP4-224ENST00000599016 HERC2P3Q9BVR0 1158 aa23.32■■□□□ 1.32
LTBP4-224ENST00000599016 NT5C1AQ9BXI3 368 aa23.32■■□□□ 1.32
LTBP4-224ENST00000599016 NKX2-4Q9H2Z4 354 aa23.32■■□□□ 1.32
LTBP4-224ENST00000599016 DDX43Q9NXZ2 648 aaKnown RBP23.32■■□□□ 1.32
LTBP4-224ENST00000599016 PUF60Q9UHX1 559 aaKnown RBP23.32■■□□□ 1.32
LTBP4-224ENST00000599016 PLXNA4Q9HCM2 1894 aa23.31■■□□□ 1.32
LTBP4-224ENST00000599016 H7C4K7 107 aa23.31■■□□□ 1.32
LTBP4-224ENST00000599016 GABRDO14764 452 aa23.31■■□□□ 1.32
LTBP4-224ENST00000599016 EFEMP2O95967 443 aa23.31■■□□□ 1.32
LTBP4-224ENST00000599016 PNMA6AP0CW24 399 aaPredicted RBP23.31■■□□□ 1.32
LTBP4-224ENST00000599016 PCSK1P29120 753 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms