RNA–Protein interactions for RNA: ENST00000598159.6

SSBP4-205, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 747 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-205ENST00000598159 C2orf15Q8WU43 125 aaKnown RBP24.82■■□□□ 1.56
SSBP4-205ENST00000598159 PDE11AQ9HCR9 933 aa24.82■■□□□ 1.56
SSBP4-205ENST00000598159 ITGA11Q9UKX5 1188 aa24.82■■□□□ 1.56
SSBP4-205ENST00000598159 AGAP1Q9UPQ3 857 aa24.82■■□□□ 1.56
SSBP4-205ENST00000598159 SIT1Q9Y3P8 196 aa24.82■■□□□ 1.56
SSBP4-205ENST00000598159 PVALEFA0A1B0GWK0 134 aa24.81■■□□□ 1.56
SSBP4-205ENST00000598159 ITGB3P05106 788 aa24.81■■□□□ 1.56
SSBP4-205ENST00000598159 PRKCQQ04759 706 aa24.81■■□□□ 1.56
SSBP4-205ENST00000598159 EPM2AIP1Q7L775 607 aaPredicted RBP24.81■■□□□ 1.56
SSBP4-205ENST00000598159 C1orf127Q8N9H9 656 aa24.81■■□□□ 1.56
SSBP4-205ENST00000598159 GLIS3Q8NEA6 775 aa24.81■■□□□ 1.56
SSBP4-205ENST00000598159 LRRC3Q9BY71 257 aa24.81■■□□□ 1.56
SSBP4-205ENST00000598159 PLA2G2FQ9BZM2 168 aa24.81■■□□□ 1.56
SSBP4-205ENST00000598159 MOSPD3O75425 235 aa24.8■■□□□ 1.56
SSBP4-205ENST00000598159 POLR2BP30876 1174 aaKnown RBP24.8■■□□□ 1.56
SSBP4-205ENST00000598159 HOXD13P35453 343 aa24.8■■□□□ 1.56
SSBP4-205ENST00000598159 SNRPFP62306 86 aaKnown RBP24.8■■□□□ 1.56
SSBP4-205ENST00000598159 RBP5P82980 135 aa24.8■■□□□ 1.56
SSBP4-205ENST00000598159 SNW1Q13573 536 aaKnown RBP24.8■■□□□ 1.56
SSBP4-205ENST00000598159 SLC39A12Q504Y0 691 aa24.8■■□□□ 1.56
SSBP4-205ENST00000598159 FAM78AQ5JUQ0 283 aa24.8■■□□□ 1.56
SSBP4-205ENST00000598159 DCP1BQ8IZD4 617 aaKnown RBP24.8■■□□□ 1.56
SSBP4-205ENST00000598159 LRRC52Q8N7C0 313 aa24.8■■□□□ 1.56
SSBP4-205ENST00000598159 ASB16Q96NS5 453 aa24.8■■□□□ 1.56
SSBP4-205ENST00000598159 DNAJC25Q9H1X3 360 aa24.8■■□□□ 1.56
SSBP4-205ENST00000598159 EHHADHQ08426 723 aa24.79■■□□□ 1.56
SSBP4-205ENST00000598159 MLF2Q15773 248 aaPredicted RBP24.79■■□□□ 1.56
SSBP4-205ENST00000598159 DNAJB7Q7Z6W7 309 aaPredicted RBP24.79■■□□□ 1.56
SSBP4-205ENST00000598159 ITIH5Q86UX2 942 aa24.79■■□□□ 1.56
SSBP4-205ENST00000598159 CEP57L1Q8IYX8 460 aa24.79■■□□□ 1.56
SSBP4-205ENST00000598159 SPPL2BQ8TCT7 592 aa24.79■■□□□ 1.56
SSBP4-205ENST00000598159 SMARCD2Q92925 531 aa24.79■■□□□ 1.56
SSBP4-205ENST00000598159 PSMG2Q969U7 264 aa24.79■■□□□ 1.56
SSBP4-205ENST00000598159 ANKRD36BP1Q96IX9 119 aa24.79■■□□□ 1.56
SSBP4-205ENST00000598159 ZSWIM3Q96MP5 696 aa24.79■■□□□ 1.56
SSBP4-205ENST00000598159 FAM86C1Q9NVL1 165 aa24.79■■□□□ 1.56
SSBP4-205ENST00000598159 HSPBP1Q9NZL4 362 aa24.79■■□□□ 1.56
SSBP4-205ENST00000598159 R3HCC1Q9Y3T6 440 aaKnown RBP24.79■■□□□ 1.56
SSBP4-205ENST00000598159 PIEZO1Q92508 2521 aa24.79■■□□□ 1.56
SSBP4-205ENST00000598159 HUS1O60921 280 aa24.78■■□□□ 1.56
SSBP4-205ENST00000598159 FGF19O95750 216 aa24.78■■□□□ 1.56
SSBP4-205ENST00000598159 KRT19P08727 400 aa24.78■■□□□ 1.56
SSBP4-205ENST00000598159 TMEM191BP0C7N4 346 aa24.78■■□□□ 1.56
SSBP4-205ENST00000598159 AFMP43652 599 aa24.78■■□□□ 1.56
SSBP4-205ENST00000598159 LRRTM3Q86VH5 581 aa24.78■■□□□ 1.56
SSBP4-205ENST00000598159 TMEM86AQ8N2M4 240 aa24.78■■□□□ 1.56
SSBP4-205ENST00000598159 CXorf38Q8TB03 319 aa24.78■■□□□ 1.56
SSBP4-205ENST00000598159 BLZF1Q9H2G9 400 aa24.78■■□□□ 1.56
SSBP4-205ENST00000598159 TRPV4Q9HBA0 871 aa24.78■■□□□ 1.56
SSBP4-205ENST00000598159 INTS13Q9NVM9 706 aa24.78■■□□□ 1.56
SSBP4-205ENST00000598159 GDAP2Q9NXN4 497 aa24.78■■□□□ 1.56
SSBP4-205ENST00000598159 UBE4BO95155 1302 aa24.78■■□□□ 1.56
SSBP4-205ENST00000598159 CACNA1HO95180 2353 aa24.78■■□□□ 1.56
SSBP4-205ENST00000598159 TSC2P49815 1807 aa24.77■■□□□ 1.56
SSBP4-205ENST00000598159 KANSL1LA0AUZ9 987 aa24.77■■□□□ 1.56
SSBP4-205ENST00000598159 SLFN14P0C7P3 912 aa24.77■■□□□ 1.56
SSBP4-205ENST00000598159 GJA1P17302 382 aa24.77■■□□□ 1.56
SSBP4-205ENST00000598159 FCARP24071 287 aa24.77■■□□□ 1.56
SSBP4-205ENST00000598159 TEAD2Q15562 447 aa24.77■■□□□ 1.56
SSBP4-205ENST00000598159 DUOXA2Q1HG44 320 aa24.77■■□□□ 1.56
SSBP4-205ENST00000598159 MGAT5BQ3V5L5 792 aa24.77■■□□□ 1.56
SSBP4-205ENST00000598159 TMC8Q8IU68 726 aa24.77■■□□□ 1.56
SSBP4-205ENST00000598159 TTC9BQ8N6N2 239 aa24.77■■□□□ 1.56
SSBP4-205ENST00000598159 SHKBP1Q8TBC3 707 aa24.77■■□□□ 1.56
SSBP4-205ENST00000598159 SPATA18Q8TC71 538 aa24.77■■□□□ 1.56
SSBP4-205ENST00000598159 E2F7Q96AV8 911 aa24.77■■□□□ 1.56
SSBP4-205ENST00000598159 DDX23Q9BUQ8 820 aaKnown RBP24.77■■□□□ 1.56
SSBP4-205ENST00000598159 TRMT61BQ9BVS5 477 aaKnown RBP24.77■■□□□ 1.56
SSBP4-205ENST00000598159 PROB1E7EW31 1015 aa24.76■■□□□ 1.55
SSBP4-205ENST00000598159 NRG2O14511 850 aaPredicted RBP24.76■■□□□ 1.55
SSBP4-205ENST00000598159 TGFB1I1O43294 461 aa24.76■■□□□ 1.55
SSBP4-205ENST00000598159 TNNC2P02585 160 aa24.76■■□□□ 1.55
SSBP4-205ENST00000598159 TSPY1Q01534 308 aa24.76■■□□□ 1.55
SSBP4-205ENST00000598159 CUL4BQ13620 913 aa24.76■■□□□ 1.55
SSBP4-205ENST00000598159 VEPH1Q14D04 833 aa24.76■■□□□ 1.55
SSBP4-205ENST00000598159 ANGPT1Q15389 498 aa24.76■■□□□ 1.55
SSBP4-205ENST00000598159 CBWD2Q8IUF1 395 aa24.76■■□□□ 1.55
SSBP4-205ENST00000598159 PDCL2Q8N4E4 241 aa24.76■■□□□ 1.55
SSBP4-205ENST00000598159 PJA1Q8NG27 643 aa24.76■■□□□ 1.55
SSBP4-205ENST00000598159 ZSCAN18Q8TBC5 510 aaPredicted RBP24.76■■□□□ 1.55
SSBP4-205ENST00000598159 FAM200AQ8TCP9 573 aa24.76■■□□□ 1.55
SSBP4-205ENST00000598159 SCFD1Q8WVM8 642 aa24.76■■□□□ 1.55
SSBP4-205ENST00000598159 NELL2Q99435 816 aa24.76■■□□□ 1.55
SSBP4-205ENST00000598159 SEPT5Q99719 369 aaPredicted RBP24.76■■□□□ 1.55
SSBP4-205ENST00000598159 ACBD6Q9BR61 282 aa24.76■■□□□ 1.55
SSBP4-205ENST00000598159 OSBPL6Q9BZF3 934 aa24.76■■□□□ 1.55
SSBP4-205ENST00000598159 MTMR12Q9C0I1 747 aa24.76■■□□□ 1.55
SSBP4-205ENST00000598159 AGPAT3Q9NRZ7 376 aa24.76■■□□□ 1.55
SSBP4-205ENST00000598159 CGNQ9P2M7 1197 aaKnown RBP24.76■■□□□ 1.55
SSBP4-205ENST00000598159 SERTAD1Q9UHV2 236 aa24.76■■□□□ 1.55
SSBP4-205ENST00000598159 SIX4Q9UIU6 781 aa24.76■■□□□ 1.55
SSBP4-205ENST00000598159 A0A1W2PRU2 124 aa24.75■■□□□ 1.55
SSBP4-205ENST00000598159 SOAT2O75908 522 aa24.75■■□□□ 1.55
SSBP4-205ENST00000598159 DCNP07585 359 aaKnown RBP24.75■■□□□ 1.55
SSBP4-205ENST00000598159 HAPLN1P10915 354 aaPredicted RBP24.75■■□□□ 1.55
SSBP4-205ENST00000598159 PSMC3P17980 439 aa24.75■■□□□ 1.55
SSBP4-205ENST00000598159 CMA1P23946 247 aa24.75■■□□□ 1.55
SSBP4-205ENST00000598159 CASP1P29466 404 aa24.75■■□□□ 1.55
SSBP4-205ENST00000598159 BFSP1Q12934 665 aa24.75■■□□□ 1.55
SSBP4-205ENST00000598159 MYO1EQ12965 1108 aa24.75■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms