RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 TEX28O15482 410 aa23.68■■□□□ 1.38
CHMP2A-204ENST00000597848 KLRC2P26717 231 aa23.68■■□□□ 1.38
CHMP2A-204ENST00000597848 RAP1GAPP47736 663 aa23.68■■□□□ 1.38
CHMP2A-204ENST00000597848 CDH8P55286 799 aa23.68■■□□□ 1.38
CHMP2A-204ENST00000597848 ARPP19P56211 112 aa23.68■■□□□ 1.38
CHMP2A-204ENST00000597848 FILIP1LQ4L180 1135 aa23.68■■□□□ 1.38
CHMP2A-204ENST00000597848 OR6B3Q8NGW1 331 aa23.68■■□□□ 1.38
CHMP2A-204ENST00000597848 LMO3Q8TAP4 145 aa23.68■■□□□ 1.38
CHMP2A-204ENST00000597848 MRPL45Q9BRJ2 306 aaKnown RBP23.68■■□□□ 1.38
CHMP2A-204ENST00000597848 FNIP2Q9P278 1114 aa23.68■■□□□ 1.38
CHMP2A-204ENST00000597848 MTRRQ9UBK8 725 aa23.68■■□□□ 1.38
CHMP2A-204ENST00000597848 FBXL5Q9UKA1 691 aa23.68■■□□□ 1.38
CHMP2A-204ENST00000597848 LGALS16A8MUM7 142 aa23.67■■□□□ 1.38
CHMP2A-204ENST00000597848 TACC1O75410 805 aa23.67■■□□□ 1.38
CHMP2A-204ENST00000597848 WEE2P0C1S8 567 aa23.67■■□□□ 1.38
CHMP2A-204ENST00000597848 FAM163BP0C2L3 166 aa23.67■■□□□ 1.38
CHMP2A-204ENST00000597848 SLC9A1P19634 815 aa23.67■■□□□ 1.38
CHMP2A-204ENST00000597848 GNL1P36915 607 aaPredicted RBP23.67■■□□□ 1.38
CHMP2A-204ENST00000597848 ASPAP45381 313 aa23.67■■□□□ 1.38
CHMP2A-204ENST00000597848 NRIP1P48552 1158 aa23.67■■□□□ 1.38
CHMP2A-204ENST00000597848 LHX1P48742 406 aa23.67■■□□□ 1.38
CHMP2A-204ENST00000597848 UBXN1Q04323 297 aa23.67■■□□□ 1.38
CHMP2A-204ENST00000597848 TCEAL5Q5H9L2 206 aa23.67■■□□□ 1.38
CHMP2A-204ENST00000597848 APTXQ7Z2E3 356 aaKnown RBP23.67■■□□□ 1.38
CHMP2A-204ENST00000597848 LIMS2Q7Z4I7 341 aa23.67■■□□□ 1.38
CHMP2A-204ENST00000597848 CLSTN3Q9BQT9 956 aa23.67■■□□□ 1.38
CHMP2A-204ENST00000597848 IGFLR1Q9H665 355 aa23.67■■□□□ 1.38
CHMP2A-204ENST00000597848 DDX43Q9NXZ2 648 aaKnown RBP23.67■■□□□ 1.38
CHMP2A-204ENST00000597848 CDY1Q9Y6F8 540 aa23.67■■□□□ 1.38
CHMP2A-204ENST00000597848 OR6C75A6NL08 312 aa23.66■■□□□ 1.38
CHMP2A-204ENST00000597848 ADH1AP07327 375 aa23.66■■□□□ 1.38
CHMP2A-204ENST00000597848 WARSP23381 471 aaKnown RBP23.66■■□□□ 1.38
CHMP2A-204ENST00000597848 PON1P27169 355 aa23.66■■□□□ 1.38
CHMP2A-204ENST00000597848 OR1D2P34982 312 aa23.66■■□□□ 1.38
CHMP2A-204ENST00000597848 NDUFV1P49821 464 aa23.66■■□□□ 1.38
CHMP2A-204ENST00000597848 FANCCQ00597 558 aa23.66■■□□□ 1.38
CHMP2A-204ENST00000597848 TRIM65Q6PJ69 517 aa23.66■■□□□ 1.38
CHMP2A-204ENST00000597848 RSPO2Q6UXX9 243 aaPredicted RBP23.66■■□□□ 1.38
CHMP2A-204ENST00000597848 OSTM1Q86WC4 334 aa23.66■■□□□ 1.38
CHMP2A-204ENST00000597848 PPM1KQ8N3J5 372 aa23.66■■□□□ 1.38
CHMP2A-204ENST00000597848 SPATA18Q8TC71 538 aa23.66■■□□□ 1.38
CHMP2A-204ENST00000597848 KBTBD7Q8WVZ9 684 aa23.66■■□□□ 1.38
CHMP2A-204ENST00000597848 OXCT2Q9BYC2 517 aaPredicted RBP23.66■■□□□ 1.38
CHMP2A-204ENST00000597848 BCO2Q9BYV7 579 aa23.66■■□□□ 1.38
CHMP2A-204ENST00000597848 SDCBP2Q9H190 292 aa23.66■■□□□ 1.38
CHMP2A-204ENST00000597848 CYP3A43Q9HB55 503 aa23.66■■□□□ 1.38
CHMP2A-204ENST00000597848 GABRDO14764 452 aa23.65■■□□□ 1.38
CHMP2A-204ENST00000597848 ADAM12O43184 909 aa23.65■■□□□ 1.38
CHMP2A-204ENST00000597848 TBC1D4O60343 1298 aa23.65■■□□□ 1.38
CHMP2A-204ENST00000597848 CLASP2O75122 1294 aaKnown RBP23.65■■□□□ 1.38
CHMP2A-204ENST00000597848 PDGFRBP09619 1106 aa23.65■■□□□ 1.38
CHMP2A-204ENST00000597848 CD58P19256 250 aa23.65■■□□□ 1.38
CHMP2A-204ENST00000597848 GAS2L3Q86XJ1 694 aa23.65■■□□□ 1.38
CHMP2A-204ENST00000597848 PALB2Q86YC2 1186 aa23.65■■□□□ 1.38
CHMP2A-204ENST00000597848 FAXDC2Q96IV6 333 aa23.65■■□□□ 1.38
CHMP2A-204ENST00000597848 PCMTD1Q96MG8 357 aaPredicted RBP23.65■■□□□ 1.38
CHMP2A-204ENST00000597848 RBSNQ9H1K0 784 aa23.65■■□□□ 1.38
CHMP2A-204ENST00000597848 MYO7AQ13402 2215 aa23.64■■□□□ 1.38
CHMP2A-204ENST00000597848 CPB1P15086 417 aa23.64■■□□□ 1.37
CHMP2A-204ENST00000597848 TBXAS1P24557 533 aaPredicted RBP23.64■■□□□ 1.37
CHMP2A-204ENST00000597848 ACAT1P24752 427 aaKnown RBP23.64■■□□□ 1.37
CHMP2A-204ENST00000597848 PCSK1P29120 753 aa23.64■■□□□ 1.37
CHMP2A-204ENST00000597848 CUL2Q13617 745 aa23.64■■□□□ 1.37
CHMP2A-204ENST00000597848 CCDC85BQ15834 202 aaPredicted RBP23.64■■□□□ 1.37
CHMP2A-204ENST00000597848 DUSP6Q16828 381 aa23.64■■□□□ 1.37
CHMP2A-204ENST00000597848 RRAGAQ7L523 313 aa23.64■■□□□ 1.37
CHMP2A-204ENST00000597848 ARHGEF19Q8IW93 802 aa23.64■■□□□ 1.37
CHMP2A-204ENST00000597848 ARID3AQ99856 593 aa23.64■■□□□ 1.37
CHMP2A-204ENST00000597848 RTP3Q9BQQ7 232 aa23.64■■□□□ 1.37
CHMP2A-204ENST00000597848 UBE2TQ9NPD8 197 aaPredicted RBP23.64■■□□□ 1.37
CHMP2A-204ENST00000597848 RTN4Q9NQC3 1192 aaKnown RBP23.64■■□□□ 1.37
CHMP2A-204ENST00000597848 CHD7Q9P2D1 2997 aa23.64■■□□□ 1.37
CHMP2A-204ENST00000597848 VWA8A3KMH1 1905 aa23.64■■□□□ 1.37
CHMP2A-204ENST00000597848 A8MXQ7 604 aa23.63■■□□□ 1.37
CHMP2A-204ENST00000597848 HCRTO43612 131 aa23.63■■□□□ 1.37
CHMP2A-204ENST00000597848 OR4Q2P0C623 313 aa23.63■■□□□ 1.37
CHMP2A-204ENST00000597848 LMO2P25791 158 aa23.63■■□□□ 1.37
CHMP2A-204ENST00000597848 GTF2F1P35269 517 aaKnown RBP eCLIP23.63■■□□□ 1.37
CHMP2A-204ENST00000597848 TSPY1Q01534 308 aa23.63■■□□□ 1.37
CHMP2A-204ENST00000597848 APBA1Q02410 837 aa23.63■■□□□ 1.37
CHMP2A-204ENST00000597848 KCNMA1Q12791 1236 aa23.63■■□□□ 1.37
CHMP2A-204ENST00000597848 SLC8B1Q6J4K2 584 aa23.63■■□□□ 1.37
CHMP2A-204ENST00000597848 PHLDB3Q6NSJ2 640 aa23.63■■□□□ 1.37
CHMP2A-204ENST00000597848 PPFIBP1Q86W92 1011 aa23.63■■□□□ 1.37
CHMP2A-204ENST00000597848 OR10T2Q8NGX3 314 aa23.63■■□□□ 1.37
CHMP2A-204ENST00000597848 PPM1EQ8WY54 764 aa23.63■■□□□ 1.37
CHMP2A-204ENST00000597848 NAP1L5Q96NT1 182 aaPredicted RBP23.63■■□□□ 1.37
CHMP2A-204ENST00000597848 TMEM209Q96SK2 561 aa23.63■■□□□ 1.37
CHMP2A-204ENST00000597848 CDCA3Q99618 268 aaPredicted RBP23.63■■□□□ 1.37
CHMP2A-204ENST00000597848 ACBD6Q9BR61 282 aa23.63■■□□□ 1.37
CHMP2A-204ENST00000597848 LSM14BQ9BX40 385 aaKnown RBP23.63■■□□□ 1.37
CHMP2A-204ENST00000597848 UBASH3AP57075 661 aa23.62■■□□□ 1.37
CHMP2A-204ENST00000597848 YWHAEP62258 255 aaKnown RBP23.62■■□□□ 1.37
CHMP2A-204ENST00000597848 ROR1Q01973 937 aa23.62■■□□□ 1.37
CHMP2A-204ENST00000597848 HYAL1Q12794 435 aa23.62■■□□□ 1.37
CHMP2A-204ENST00000597848 RAB33AQ14088 237 aa23.62■■□□□ 1.37
CHMP2A-204ENST00000597848 SYCP1Q15431 976 aa23.62■■□□□ 1.37
CHMP2A-204ENST00000597848 LLGL2Q6P1M3 1020 aa23.62■■□□□ 1.37
CHMP2A-204ENST00000597848 DCP1BQ8IZD4 617 aaKnown RBP23.62■■□□□ 1.37
CHMP2A-204ENST00000597848 CISHQ9NSE2 258 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms