RNA–Protein interactions for RNA: ENST00000597828.5

SOX2-OT-228, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 864 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-228ENST00000597828 FAM84AQ96KN4 292 aa13.11□□□□□ -0.31
SOX2-OT-228ENST00000597828 LRRC3BQ96PB8 259 aa13.11□□□□□ -0.31
SOX2-OT-228ENST00000597828 NELL2Q99435 816 aa13.11□□□□□ -0.31
SOX2-OT-228ENST00000597828 LMAN1LQ9HAT1 526 aa13.11□□□□□ -0.31
SOX2-OT-228ENST00000597828 TRPV4Q9HBA0 871 aa13.11□□□□□ -0.31
SOX2-OT-228ENST00000597828 RBM12Q9NTZ6 932 aaKnown RBP13.11□□□□□ -0.31
SOX2-OT-228ENST00000597828 ZSCAN32Q9NX65 697 aa13.11□□□□□ -0.31
SOX2-OT-228ENST00000597828 MAFFQ9ULX9 164 aa13.11□□□□□ -0.31
SOX2-OT-228ENST00000597828 CLIC4Q9Y696 253 aa13.11□□□□□ -0.31
SOX2-OT-228ENST00000597828 ANO9A1A5B4 782 aa13.1□□□□□ -0.31
SOX2-OT-228ENST00000597828 VPS37CA5D8V6 355 aaPredicted RBP13.1□□□□□ -0.31
SOX2-OT-228ENST00000597828 MAN2B1O00754 1011 aa13.1□□□□□ -0.31
SOX2-OT-228ENST00000597828 SLC26A4O43511 780 aa13.1□□□□□ -0.31
SOX2-OT-228ENST00000597828 PRAMEF12O95522 483 aa13.1□□□□□ -0.31
SOX2-OT-228ENST00000597828 LONP1P36776 959 aaKnown RBP13.1□□□□□ -0.31
SOX2-OT-228ENST00000597828 ALDH1A3P47895 512 aa13.1□□□□□ -0.31
SOX2-OT-228ENST00000597828 FOXK2Q01167 660 aa13.1□□□□□ -0.31
SOX2-OT-228ENST00000597828 SATB1Q01826 763 aa13.1□□□□□ -0.31
SOX2-OT-228ENST00000597828 KCNA1Q09470 495 aa13.1□□□□□ -0.31
SOX2-OT-228ENST00000597828 MYBPC2Q14324 1141 aa13.1□□□□□ -0.31
SOX2-OT-228ENST00000597828 LPAL2Q16609 132 aa13.1□□□□□ -0.31
SOX2-OT-228ENST00000597828 KYAT1Q16773 422 aa13.1□□□□□ -0.31
SOX2-OT-228ENST00000597828 SLC39A12Q504Y0 691 aa13.1□□□□□ -0.31
SOX2-OT-228ENST00000597828 GPR158Q5T848 1215 aa13.1□□□□□ -0.31
SOX2-OT-228ENST00000597828 SCARA3Q6AZY7 606 aa13.1□□□□□ -0.31
SOX2-OT-228ENST00000597828 ADALQ6DHV7 355 aa13.1□□□□□ -0.31
SOX2-OT-228ENST00000597828 FAM173BQ6P4H8 233 aa13.1□□□□□ -0.31
SOX2-OT-228ENST00000597828 TXNDC11Q6PKC3 985 aa13.1□□□□□ -0.31
SOX2-OT-228ENST00000597828 CRELD2Q6UXH1 353 aaPredicted RBP13.1□□□□□ -0.31
SOX2-OT-228ENST00000597828 Q6ZS52 159 aa13.1□□□□□ -0.31
SOX2-OT-228ENST00000597828 DNAJB7Q7Z6W7 309 aaPredicted RBP13.1□□□□□ -0.31
SOX2-OT-228ENST00000597828 ARID3BQ8IVW6 561 aaPredicted RBP13.1□□□□□ -0.31
SOX2-OT-228ENST00000597828 PSMG2Q969U7 264 aa13.1□□□□□ -0.31
SOX2-OT-228ENST00000597828 SEPT5Q99719 369 aaPredicted RBP13.1□□□□□ -0.31
SOX2-OT-228ENST00000597828 SMG9Q9H0W8 520 aaKnown RBP13.1□□□□□ -0.31
SOX2-OT-228ENST00000597828 EPC1Q9H2F5 836 aa13.1□□□□□ -0.31
SOX2-OT-228ENST00000597828 ATXN3LQ9H3M9 355 aa13.1□□□□□ -0.31
SOX2-OT-228ENST00000597828 MYO18AQ92614 2054 aaKnown RBP13.09□□□□□ -0.31
SOX2-OT-228ENST00000597828 TNRC6BQ9UPQ9 1833 aaKnown RBP13.09□□□□□ -0.31
SOX2-OT-228ENST00000597828 CYP11A1P05108 521 aa13.09□□□□□ -0.31
SOX2-OT-228ENST00000597828 CHRNB1P11230 501 aa13.09□□□□□ -0.31
SOX2-OT-228ENST00000597828 DMWDQ09019 674 aa13.09□□□□□ -0.31
SOX2-OT-228ENST00000597828 FCHO2Q0JRZ9 810 aa13.09□□□□□ -0.31
SOX2-OT-228ENST00000597828 PTPAQ15257 358 aa13.09□□□□□ -0.31
SOX2-OT-228ENST00000597828 RSPO4Q2I0M5 234 aaPredicted RBP13.09□□□□□ -0.31
SOX2-OT-228ENST00000597828 MGAT5BQ3V5L5 792 aa13.09□□□□□ -0.31
SOX2-OT-228ENST00000597828 DGLUCYQ7Z3D6 616 aa13.09□□□□□ -0.31
SOX2-OT-228ENST00000597828 BRAPQ7Z569 592 aa13.09□□□□□ -0.31
SOX2-OT-228ENST00000597828 LRRTM3Q86VH5 581 aa13.09□□□□□ -0.31
SOX2-OT-228ENST00000597828 YAF2Q8IY57 180 aa13.09□□□□□ -0.31
SOX2-OT-228ENST00000597828 FAM200AQ8TCP9 573 aa13.09□□□□□ -0.31
SOX2-OT-228ENST00000597828 CSGALNACT1Q8TDX6 532 aa13.09□□□□□ -0.31
SOX2-OT-228ENST00000597828 GIPC2Q8TF65 315 aa13.09□□□□□ -0.31
SOX2-OT-228ENST00000597828 CLIC6Q96NY7 704 aa13.09□□□□□ -0.31
SOX2-OT-228ENST00000597828 PYM1Q9BRP8 204 aaKnown RBP13.09□□□□□ -0.31
SOX2-OT-228ENST00000597828 OXCT2Q9BYC2 517 aaPredicted RBP13.09□□□□□ -0.31
SOX2-OT-228ENST00000597828 CCSER1Q9C0I3 900 aa13.09□□□□□ -0.31
SOX2-OT-228ENST00000597828 ZCWPW1Q9H0M4 648 aa13.09□□□□□ -0.31
SOX2-OT-228ENST00000597828 IL21Q9HBE4 155 aa13.09□□□□□ -0.31
SOX2-OT-228ENST00000597828 TRPV5Q9NQA5 729 aa13.09□□□□□ -0.31
SOX2-OT-228ENST00000597828 C2orf42Q9NWW7 574 aa13.09□□□□□ -0.31
SOX2-OT-228ENST00000597828 GTSE1Q9NYZ3 720 aa13.09□□□□□ -0.31
SOX2-OT-228ENST00000597828 TBC1D7Q9P0N9 293 aa13.09□□□□□ -0.31
SOX2-OT-228ENST00000597828 AGO2Q9UKV8 859 aaKnown RBP13.09□□□□□ -0.31
SOX2-OT-228ENST00000597828 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.09□□□□□ -0.31
SOX2-OT-228ENST00000597828 SPTBN2O15020 2390 aa13.09□□□□□ -0.31
SOX2-OT-228ENST00000597828 TULP1O00294 542 aaPredicted RBP13.08□□□□□ -0.32
SOX2-OT-228ENST00000597828 CYB561D2O14569 222 aa13.08□□□□□ -0.32
SOX2-OT-228ENST00000597828 CHADO15335 359 aa13.08□□□□□ -0.32
SOX2-OT-228ENST00000597828 PPP1R37O75864 691 aa13.08□□□□□ -0.32
SOX2-OT-228ENST00000597828 ADSSP30520 456 aa13.08□□□□□ -0.32
SOX2-OT-228ENST00000597828 GPR15P49685 360 aa13.08□□□□□ -0.32
SOX2-OT-228ENST00000597828 TAF6P49848 677 aa13.08□□□□□ -0.32
SOX2-OT-228ENST00000597828 TNK2Q07912 1038 aa13.08□□□□□ -0.32
SOX2-OT-228ENST00000597828 SRSF5Q13243 272 aaKnown RBP13.08□□□□□ -0.32
SOX2-OT-228ENST00000597828 CCDC142Q17RM4 750 aa13.08□□□□□ -0.32
SOX2-OT-228ENST00000597828 WSCD1Q658N2 575 aa13.08□□□□□ -0.32
SOX2-OT-228ENST00000597828 ARMCX5Q6P1M9 558 aa13.08□□□□□ -0.32
SOX2-OT-228ENST00000597828 CD302Q8IX05 232 aa13.08□□□□□ -0.32
SOX2-OT-228ENST00000597828 SAAL1Q96ER3 474 aa13.08□□□□□ -0.32
SOX2-OT-228ENST00000597828 FGFBP2Q9BYJ0 223 aa13.08□□□□□ -0.32
SOX2-OT-228ENST00000597828 GPR88Q9GZN0 384 aa13.08□□□□□ -0.32
SOX2-OT-228ENST00000597828 PARD6AQ9NPB6 346 aa13.08□□□□□ -0.32
SOX2-OT-228ENST00000597828 TMLHEQ9NVH6 421 aa13.08□□□□□ -0.32
SOX2-OT-228ENST00000597828 DPP3Q9NY33 737 aa13.08□□□□□ -0.32
SOX2-OT-228ENST00000597828 ABI2Q9NYB9 513 aaPredicted RBP13.08□□□□□ -0.32
SOX2-OT-228ENST00000597828 FBXO2Q9UK22 296 aaPredicted RBP13.08□□□□□ -0.32
SOX2-OT-228ENST00000597828 DERAQ9Y315 318 aa13.08□□□□□ -0.32
SOX2-OT-228ENST00000597828 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.08□□□□□ -0.32
SOX2-OT-228ENST00000597828 STYXL1Q9Y6J8 313 aa13.08□□□□□ -0.32
SOX2-OT-228ENST00000597828 MYMKA6NI61 221 aa13.07□□□□□ -0.32
SOX2-OT-228ENST00000597828 SPECC1L-ADORA2AF8WAN1 911 aa13.07□□□□□ -0.32
SOX2-OT-228ENST00000597828 BMP15O95972 392 aa13.07□□□□□ -0.32
SOX2-OT-228ENST00000597828 CTHP32929 405 aa13.07□□□□□ -0.32
SOX2-OT-228ENST00000597828 DDIT3P35638 169 aa13.07□□□□□ -0.32
SOX2-OT-228ENST00000597828 MCM2P49736 904 aa13.07□□□□□ -0.32
SOX2-OT-228ENST00000597828 CASP5P51878 434 aa13.07□□□□□ -0.32
SOX2-OT-228ENST00000597828 KPNA1P52294 538 aaPredicted RBP13.07□□□□□ -0.32
SOX2-OT-228ENST00000597828 CEBPZQ03701 1054 aaKnown RBP13.07□□□□□ -0.32
SOX2-OT-228ENST00000597828 PUM1Q14671 1186 aaKnown RBP eCLIP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms