RNA–Protein interactions for RNA: ENST00000596814.5

VRK3-212, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,736 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-212ENST00000596814 RAD23BP54727 409 aa15.63■□□□□ 0.09
VRK3-212ENST00000596814 BMS1Q14692 1282 aaKnown RBP15.63■□□□□ 0.09
VRK3-212ENST00000596814 ZSCAN30Q86W11 494 aa15.63■□□□□ 0.09
VRK3-212ENST00000596814 CMTR2Q8IYT2 770 aaKnown RBP15.63■□□□□ 0.09
VRK3-212ENST00000596814 OR6B3Q8NGW1 331 aa15.63■□□□□ 0.09
VRK3-212ENST00000596814 WHAMMQ8TF30 809 aa15.63■□□□□ 0.09
VRK3-212ENST00000596814 HERVK_113Q902F9 699 aa15.63■□□□□ 0.09
VRK3-212ENST00000596814 TWNKQ96RR1 684 aa15.63■□□□□ 0.09
VRK3-212ENST00000596814 AGPAT1Q99943 283 aa15.63■□□□□ 0.09
VRK3-212ENST00000596814 DESI2Q9BSY9 194 aa15.63■□□□□ 0.09
VRK3-212ENST00000596814 NT5C1AQ9BXI3 368 aa15.63■□□□□ 0.09
VRK3-212ENST00000596814 ELOVL4Q9GZR5 314 aa15.63■□□□□ 0.09
VRK3-212ENST00000596814 MTIF3Q9H2K0 278 aaKnown RBP15.63■□□□□ 0.09
VRK3-212ENST00000596814 PUF60Q9UHX1 559 aaKnown RBP15.63■□□□□ 0.09
VRK3-212ENST00000596814 NR2E3Q9Y5X4 410 aa15.63■□□□□ 0.09
VRK3-212ENST00000596814 EIF3CLB5ME19 914 aaKnown RBP15.63■□□□□ 0.09
VRK3-212ENST00000596814 I3L4J1 428 aa15.63■□□□□ 0.09
VRK3-212ENST00000596814 NRP1O14786 923 aa15.63■□□□□ 0.09
VRK3-212ENST00000596814 CALCAP01258 141 aa15.63■□□□□ 0.09
VRK3-212ENST00000596814 ALDH2P05091 517 aa15.63■□□□□ 0.09
VRK3-212ENST00000596814 FAM163BP0C2L3 166 aa15.63■□□□□ 0.09
VRK3-212ENST00000596814 WARSP23381 471 aaKnown RBP15.63■□□□□ 0.09
VRK3-212ENST00000596814 CDR2Q01850 454 aa15.63■□□□□ 0.09
VRK3-212ENST00000596814 SLC18A3Q16572 532 aa15.63■□□□□ 0.09
VRK3-212ENST00000596814 TAF3Q5VWG9 929 aa15.63■□□□□ 0.09
VRK3-212ENST00000596814 UNC93AQ86WB7 457 aa15.63■□□□□ 0.09
VRK3-212ENST00000596814 ZNF677Q86XU0 584 aa15.63■□□□□ 0.09
VRK3-212ENST00000596814 TMEM86AQ8N2M4 240 aa15.63■□□□□ 0.09
VRK3-212ENST00000596814 TMEM176AQ96HP8 235 aa15.63■□□□□ 0.09
VRK3-212ENST00000596814 SUSD3Q96L08 255 aa15.63■□□□□ 0.09
VRK3-212ENST00000596814 SLC9A7Q96T83 725 aa15.63■□□□□ 0.09
VRK3-212ENST00000596814 YME1L1Q96TA2 773 aa15.63■□□□□ 0.09
VRK3-212ENST00000596814 EIF3CQ99613 913 aaKnown RBP15.63■□□□□ 0.09
VRK3-212ENST00000596814 COLEC11Q9BWP8 271 aa15.63■□□□□ 0.09
VRK3-212ENST00000596814 SNX25Q9H3E2 840 aa15.63■□□□□ 0.09
VRK3-212ENST00000596814 SEPT11Q9NVA2 429 aaKnown RBP15.63■□□□□ 0.09
VRK3-212ENST00000596814 CXXC1Q9P0U4 656 aaPredicted RBP15.63■□□□□ 0.09
VRK3-212ENST00000596814 ADAMTS1Q9UHI8 967 aa15.63■□□□□ 0.09
VRK3-212ENST00000596814 FAN1Q9Y2M0 1017 aa15.63■□□□□ 0.09
VRK3-212ENST00000596814 A0A087X0T9 212 aa15.62■□□□□ 0.09
VRK3-212ENST00000596814 M0QZQ0 153 aa15.62■□□□□ 0.09
VRK3-212ENST00000596814 THAP12O43422 761 aa15.62■□□□□ 0.09
VRK3-212ENST00000596814 TADA2AO75478 443 aa15.62■□□□□ 0.09
VRK3-212ENST00000596814 GALTP07902 379 aa15.62■□□□□ 0.09
VRK3-212ENST00000596814 MMEP08473 750 aa15.62■□□□□ 0.09
VRK3-212ENST00000596814 FAM228BP0C875 321 aa15.62■□□□□ 0.09
VRK3-212ENST00000596814 TNFAIP3P21580 790 aa15.62■□□□□ 0.09
VRK3-212ENST00000596814 GFPT1Q06210 699 aaPredicted RBP15.62■□□□□ 0.09
VRK3-212ENST00000596814 ORC1Q13415 861 aa15.62■□□□□ 0.09
VRK3-212ENST00000596814 BTG3Q14201 252 aaPredicted RBP15.62■□□□□ 0.09
VRK3-212ENST00000596814 WSCD1Q658N2 575 aa15.62■□□□□ 0.09
VRK3-212ENST00000596814 GLYCTKQ8IVS8 523 aa15.62■□□□□ 0.09
VRK3-212ENST00000596814 SLC4A11Q8NBS3 891 aa15.62■□□□□ 0.09
VRK3-212ENST00000596814 ACRBPQ8NEB7 543 aa15.62■□□□□ 0.09
VRK3-212ENST00000596814 OLIG1Q8TAK6 271 aa15.62■□□□□ 0.09
VRK3-212ENST00000596814 LNX1Q8TBB1 728 aaPredicted RBP15.62■□□□□ 0.09
VRK3-212ENST00000596814 KIAA1524Q8TCG1 905 aa15.62■□□□□ 0.09
VRK3-212ENST00000596814 DDX1Q92499 740 aaKnown RBP15.62■□□□□ 0.09
VRK3-212ENST00000596814 CWH43Q9H720 699 aa15.62■□□□□ 0.09
VRK3-212ENST00000596814 MARCH5Q9NX47 278 aa15.62■□□□□ 0.09
VRK3-212ENST00000596814 ADAM28Q9UKQ2 775 aa15.62■□□□□ 0.09
VRK3-212ENST00000596814 DSEQ9UL01 958 aa15.62■□□□□ 0.09
VRK3-212ENST00000596814 NME7Q9Y5B8 376 aa15.62■□□□□ 0.09
VRK3-212ENST00000596814 KIAA1671Q9BY89 1806 aa15.62■□□□□ 0.09
VRK3-212ENST00000596814 A8MXQ7 604 aa15.61■□□□□ 0.09
VRK3-212ENST00000596814 DDX3XO00571 662 aaKnown RBP eCLIP15.61■□□□□ 0.093e-12■■□□□ 11.9
VRK3-212ENST00000596814 TRAPPC3O43617 180 aa15.61■□□□□ 0.09
VRK3-212ENST00000596814 GJB5O95377 273 aa15.61■□□□□ 0.09
VRK3-212ENST00000596814 LCA5LO95447 670 aa15.61■□□□□ 0.09
VRK3-212ENST00000596814 CCDC175P0C221 793 aa15.61■□□□□ 0.09
VRK3-212ENST00000596814 CD19P15391 556 aa15.61■□□□□ 0.09
VRK3-212ENST00000596814 CHRNB2P17787 502 aa15.61■□□□□ 0.09
VRK3-212ENST00000596814 BRD2P25440 801 aaKnown RBP15.61■□□□□ 0.09
VRK3-212ENST00000596814 GNL1P36915 607 aaPredicted RBP15.61■□□□□ 0.09
VRK3-212ENST00000596814 BCAR1P56945 870 aa15.61■□□□□ 0.09
VRK3-212ENST00000596814 FMO1Q01740 532 aa15.61■□□□□ 0.09
VRK3-212ENST00000596814 SPA17Q15506 151 aa15.61■□□□□ 0.09
VRK3-212ENST00000596814 SPOUT1Q5T280 376 aaKnown RBP15.61■□□□□ 0.09
VRK3-212ENST00000596814 OSTM1Q86WC4 334 aa15.61■□□□□ 0.09
VRK3-212ENST00000596814 SPATA18Q8TC71 538 aa15.61■□□□□ 0.09
VRK3-212ENST00000596814 DNAI2Q9GZS0 605 aa15.61■□□□□ 0.09
VRK3-212ENST00000596814 STXBP5LQ9Y2K9 1186 aa15.61■□□□□ 0.09
VRK3-212ENST00000596814 ADGRG1Q9Y653 693 aa15.61■□□□□ 0.09
VRK3-212ENST00000596814 SLC4A7Q9Y6M7 1214 aa15.61■□□□□ 0.09
VRK3-212ENST00000596814 GABRDO14764 452 aa15.6■□□□□ 0.09
VRK3-212ENST00000596814 CYP11A1P05108 521 aa15.6■□□□□ 0.09
VRK3-212ENST00000596814 MSNP26038 577 aaKnown RBP15.6■□□□□ 0.09
VRK3-212ENST00000596814 PBX3P40426 434 aa15.6■□□□□ 0.09
VRK3-212ENST00000596814 LHX1P48742 406 aa15.6■□□□□ 0.09
VRK3-212ENST00000596814 KRT83P78385 493 aa15.6■□□□□ 0.09
VRK3-212ENST00000596814 METTL23Q86XA0 190 aa15.6■□□□□ 0.09
VRK3-212ENST00000596814 SLC30A5Q8TAD4 765 aa15.6■□□□□ 0.09
VRK3-212ENST00000596814 ZNF606Q8WXB4 792 aa15.6■□□□□ 0.09
VRK3-212ENST00000596814 PDCL3Q9H2J4 239 aa15.6■□□□□ 0.09
VRK3-212ENST00000596814 PCDHB8Q9UN66 801 aa15.6■□□□□ 0.09
VRK3-212ENST00000596814 TIMM13Q9Y5L4 95 aaPredicted RBP15.6■□□□□ 0.09
VRK3-212ENST00000596814 SF3B1O75533 1304 aaKnown RBP eCLIP15.6■□□□□ 0.093e-6■■■■■ 137.9
VRK3-212ENST00000596814 NT5C1B-RDH14C9J2C7 533 aa15.6■□□□□ 0.09
VRK3-212ENST00000596814 ZNF263O14978 683 aa15.6■□□□□ 0.09
VRK3-212ENST00000596814 MED7O43513 233 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms