RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 POLIQ9UNA4 740 aa22.68■■□□□ 1.22
PNKP-209ENST00000596726 MTMR11A4FU01 709 aa22.67■■□□□ 1.22
PNKP-209ENST00000596726 MAPK13O15264 365 aa22.67■■□□□ 1.22
PNKP-209ENST00000596726 GPR37L1O60883 481 aa22.67■■□□□ 1.22
PNKP-209ENST00000596726 LRG1P02750 347 aa22.67■■□□□ 1.22
PNKP-209ENST00000596726 FSHRP23945 695 aa22.67■■□□□ 1.22
PNKP-209ENST00000596726 CENPPQ6IPU0 288 aa22.67■■□□□ 1.22
PNKP-209ENST00000596726 TOP6BLQ8N6T0 577 aa22.67■■□□□ 1.22
PNKP-209ENST00000596726 SPATA18Q8TC71 538 aa22.67■■□□□ 1.22
PNKP-209ENST00000596726 EDAQ92838 391 aa22.67■■□□□ 1.22
PNKP-209ENST00000596726 PGLYRP2Q96PD5 576 aa22.67■■□□□ 1.22
PNKP-209ENST00000596726 AVENQ9NQS1 362 aaPredicted RBP22.67■■□□□ 1.22
PNKP-209ENST00000596726 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.67■■□□□ 1.22
PNKP-209ENST00000596726 R3HCC1Q9Y3T6 440 aaKnown RBP22.67■■□□□ 1.22
PNKP-209ENST00000596726 SNX9Q9Y5X1 595 aa22.67■■□□□ 1.22
PNKP-209ENST00000596726 TECTAO75443 2155 aa22.67■■□□□ 1.22
PNKP-209ENST00000596726 LRRIQ3A6PVS8 624 aaPredicted RBP22.66■■□□□ 1.22
PNKP-209ENST00000596726 KINO60870 393 aaKnown RBP22.66■■□□□ 1.22
PNKP-209ENST00000596726 HUS1O60921 280 aa22.66■■□□□ 1.22
PNKP-209ENST00000596726 PRCPP42785 496 aa22.66■■□□□ 1.22
PNKP-209ENST00000596726 AP3M2P53677 418 aa22.66■■□□□ 1.22
PNKP-209ENST00000596726 ZXDAP98168 799 aa22.66■■□□□ 1.22
PNKP-209ENST00000596726 DUSP4Q13115 394 aa22.66■■□□□ 1.22
PNKP-209ENST00000596726 GET4Q7L5D6 327 aaPredicted RBP22.66■■□□□ 1.22
PNKP-209ENST00000596726 DPH6Q7L8W6 267 aa22.66■■□□□ 1.22
PNKP-209ENST00000596726 LRRTM3Q86VH5 581 aa22.66■■□□□ 1.22
PNKP-209ENST00000596726 TMC2Q8TDI7 906 aa22.66■■□□□ 1.22
PNKP-209ENST00000596726 GTPBP4Q9BZE4 634 aaKnown RBP22.66■■□□□ 1.22
PNKP-209ENST00000596726 HSFX1Q9UBD0 423 aa22.66■■□□□ 1.22
PNKP-209ENST00000596726 GABRDO14764 452 aa22.65■■□□□ 1.22
PNKP-209ENST00000596726 PTPN2P17706 415 aa22.65■■□□□ 1.22
PNKP-209ENST00000596726 NR2F2P24468 414 aa22.65■■□□□ 1.22
PNKP-209ENST00000596726 GBP2P32456 591 aaPredicted RBP22.65■■□□□ 1.22
PNKP-209ENST00000596726 UBE2HP62256 183 aa22.65■■□□□ 1.22
PNKP-209ENST00000596726 TWF1Q12792 350 aa22.65■■□□□ 1.22
PNKP-209ENST00000596726 SOWAHAQ2M3V2 549 aa22.65■■□□□ 1.22
PNKP-209ENST00000596726 EDRF1Q3B7T1 1238 aa22.65■■□□□ 1.22
PNKP-209ENST00000596726 PABPC1LQ4VXU2 614 aaKnown RBP22.65■■□□□ 1.22
PNKP-209ENST00000596726 SLC39A12Q504Y0 691 aa22.65■■□□□ 1.22
PNKP-209ENST00000596726 CEP135Q66GS9 1140 aa22.65■■□□□ 1.22
PNKP-209ENST00000596726 ATAD1Q8NBU5 361 aa22.65■■□□□ 1.22
PNKP-209ENST00000596726 SORCS3Q9UPU3 1222 aa22.65■■□□□ 1.22
PNKP-209ENST00000596726 FRMD4BQ9Y2L6 1034 aa22.65■■□□□ 1.22
PNKP-209ENST00000596726 YIPF1Q9Y548 306 aa22.65■■□□□ 1.22
PNKP-209ENST00000596726 AKAP3O75969 853 aa22.64■■□□□ 1.21
PNKP-209ENST00000596726 STAU1O95793 577 aaKnown RBP22.64■■□□□ 1.21
PNKP-209ENST00000596726 C4BPAP04003 597 aaKnown RBP22.64■■□□□ 1.21
PNKP-209ENST00000596726 ASGR2P07307 311 aa22.64■■□□□ 1.21
PNKP-209ENST00000596726 RHOP08100 348 aa22.64■■□□□ 1.21
PNKP-209ENST00000596726 RPL13P26373 211 aaKnown RBP22.64■■□□□ 1.21
PNKP-209ENST00000596726 MCCD1P59942 119 aaPredicted RBP22.64■■□□□ 1.21
PNKP-209ENST00000596726 DLG4P78352 724 aa22.64■■□□□ 1.21
PNKP-209ENST00000596726 SMARCB1Q12824 385 aa22.64■■□□□ 1.21
PNKP-209ENST00000596726 C1orf220Q5T0J3 134 aa22.64■■□□□ 1.21
PNKP-209ENST00000596726 OSTM1Q86WC4 334 aa22.64■■□□□ 1.21
PNKP-209ENST00000596726 ITFG1Q8TB96 612 aa22.64■■□□□ 1.21
PNKP-209ENST00000596726 ACBD6Q9BR61 282 aa22.64■■□□□ 1.21
PNKP-209ENST00000596726 DDX43Q9NXZ2 648 aaKnown RBP22.64■■□□□ 1.21
PNKP-209ENST00000596726 CEP72Q9P209 647 aa22.64■■□□□ 1.21
PNKP-209ENST00000596726 ZFP37Q9Y6Q3 630 aaPredicted RBP22.64■■□□□ 1.21
PNKP-209ENST00000596726 LAMP2P13473 410 aa22.63■■□□□ 1.21
PNKP-209ENST00000596726 ATICP31939 592 aa22.63■■□□□ 1.21
PNKP-209ENST00000596726 LHX1P48742 406 aa22.63■■□□□ 1.21
PNKP-209ENST00000596726 ENPEPQ07075 957 aa22.63■■□□□ 1.21
PNKP-209ENST00000596726 ADAM9Q13443 819 aa22.63■■□□□ 1.21
PNKP-209ENST00000596726 TMEM31Q5JXX7 168 aa22.63■■□□□ 1.21
PNKP-209ENST00000596726 TDRD10Q5VZ19 366 aaKnown RBP22.63■■□□□ 1.21
PNKP-209ENST00000596726 DCP1BQ8IZD4 617 aaKnown RBP22.63■■□□□ 1.21
PNKP-209ENST00000596726 ADGRF2Q8IZF7 708 aa22.63■■□□□ 1.21
PNKP-209ENST00000596726 TTC9BQ8N6N2 239 aa22.63■■□□□ 1.21
PNKP-209ENST00000596726 C2orf15Q8WU43 125 aaKnown RBP22.63■■□□□ 1.21
PNKP-209ENST00000596726 PKMYT1Q99640 499 aa22.63■■□□□ 1.21
PNKP-209ENST00000596726 LRFN3Q9BTN0 628 aa22.63■■□□□ 1.21
PNKP-209ENST00000596726 XYLT2Q9H1B5 865 aa22.63■■□□□ 1.21
PNKP-209ENST00000596726 KCNK12Q9HB15 430 aa22.63■■□□□ 1.21
PNKP-209ENST00000596726 IGSF9Q9P2J2 1179 aa22.63■■□□□ 1.21
PNKP-209ENST00000596726 MAN1B1Q9UKM7 699 aa22.63■■□□□ 1.21
PNKP-209ENST00000596726 CDH7Q9ULB5 785 aa22.63■■□□□ 1.21
PNKP-209ENST00000596726 SLC27A5Q9Y2P5 690 aa22.63■■□□□ 1.21
PNKP-209ENST00000596726 FAM86C2PA6NEL3 165 aa22.62■■□□□ 1.21
PNKP-209ENST00000596726 IKBKBO14920 756 aa22.62■■□□□ 1.21
PNKP-209ENST00000596726 MYL6P60660 151 aa22.62■■□□□ 1.21
PNKP-209ENST00000596726 MYL7Q01449 175 aa22.62■■□□□ 1.21
PNKP-209ENST00000596726 PLD1Q13393 1074 aa22.62■■□□□ 1.21
PNKP-209ENST00000596726 SLC5A9Q2M3M2 681 aa22.62■■□□□ 1.21
PNKP-209ENST00000596726 PRSS36Q5K4E3 855 aa22.62■■□□□ 1.21
PNKP-209ENST00000596726 CLEC17AQ6ZS10 378 aa22.62■■□□□ 1.21
PNKP-209ENST00000596726 ADSSL1Q8N142 457 aa22.62■■□□□ 1.21
PNKP-209ENST00000596726 ELMOD1Q8N336 334 aa22.62■■□□□ 1.21
PNKP-209ENST00000596726 SPPL2BQ8TCT7 592 aa22.62■■□□□ 1.21
PNKP-209ENST00000596726 KBTBD7Q8WVZ9 684 aa22.62■■□□□ 1.21
PNKP-209ENST00000596726 FGF13Q92913 245 aa22.62■■□□□ 1.21
PNKP-209ENST00000596726 ZNF512Q96ME7 567 aaPredicted RBP22.62■■□□□ 1.21
PNKP-209ENST00000596726 CORO1BQ9BR76 489 aa22.62■■□□□ 1.21
PNKP-209ENST00000596726 DNAJC25Q9H1X3 360 aa22.62■■□□□ 1.21
PNKP-209ENST00000596726 VRTNQ9H8Y1 702 aa22.62■■□□□ 1.21
PNKP-209ENST00000596726 TMLHEQ9NVH6 421 aa22.62■■□□□ 1.21
PNKP-209ENST00000596726 PHACTR2O75167 634 aa22.61■■□□□ 1.21
PNKP-209ENST00000596726 VNN1O95497 513 aa22.61■■□□□ 1.21
PNKP-209ENST00000596726 FAM163BP0C2L3 166 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms