RNA–Protein interactions for RNA: ENST00000596482.5

HOMER3-209, Transcript of homer scaffold protein 3, humanhuman

TSL 5

Gene HOMER3, Length 866 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-209ENST00000596482 L1RE1Q9UN81 338 aa20.63■□□□□ 0.89
HOMER3-209ENST00000596482 MAPK8IP1Q9UQF2 711 aa20.63■□□□□ 0.89
HOMER3-209ENST00000596482 FRMD4BQ9Y2L6 1034 aa20.63■□□□□ 0.89
HOMER3-209ENST00000596482 TMEM221A6NGB7 291 aa20.62■□□□□ 0.89
HOMER3-209ENST00000596482 M0R296 226 aa20.62■□□□□ 0.89
HOMER3-209ENST00000596482 KINO60870 393 aaKnown RBP20.62■□□□□ 0.89
HOMER3-209ENST00000596482 CLSTN1O94985 981 aa20.62■□□□□ 0.89
HOMER3-209ENST00000596482 PTPN2P17706 415 aa20.62■□□□□ 0.89
HOMER3-209ENST00000596482 MYL7Q01449 175 aa20.62■□□□□ 0.89
HOMER3-209ENST00000596482 CEP135Q66GS9 1140 aa20.62■□□□□ 0.89
HOMER3-209ENST00000596482 TRAPPC11Q7Z392 1133 aa20.62■□□□□ 0.89
HOMER3-209ENST00000596482 DCP1BQ8IZD4 617 aaKnown RBP20.62■□□□□ 0.89
HOMER3-209ENST00000596482 ADGRF2Q8IZF7 708 aa20.62■□□□□ 0.89
HOMER3-209ENST00000596482 TOP6BLQ8N6T0 577 aa20.62■□□□□ 0.89
HOMER3-209ENST00000596482 SPATA18Q8TC71 538 aa20.62■□□□□ 0.89
HOMER3-209ENST00000596482 TMEM174Q8WUU8 243 aa20.62■□□□□ 0.89
HOMER3-209ENST00000596482 TIGD1Q96MW7 591 aa20.62■□□□□ 0.89
HOMER3-209ENST00000596482 CORO1BQ9BR76 489 aa20.62■□□□□ 0.89
HOMER3-209ENST00000596482 KCNK12Q9HB15 430 aa20.62■□□□□ 0.89
HOMER3-209ENST00000596482 DMAC2Q9NW81 257 aa20.62■□□□□ 0.89
HOMER3-209ENST00000596482 MRPS23Q9Y3D9 190 aaKnown RBP20.62■□□□□ 0.89
HOMER3-209ENST00000596482 LAMP2P13473 410 aa20.61■□□□□ 0.89
HOMER3-209ENST00000596482 ALDH1A3P47895 512 aa20.61■□□□□ 0.89
HOMER3-209ENST00000596482 SMARCB1Q12824 385 aa20.61■□□□□ 0.89
HOMER3-209ENST00000596482 DUSP4Q13115 394 aa20.61■□□□□ 0.89
HOMER3-209ENST00000596482 TRPC3Q13507 836 aa20.61■□□□□ 0.89
HOMER3-209ENST00000596482 TDGQ13569 410 aa20.61■□□□□ 0.89
HOMER3-209ENST00000596482 PDZD4Q76G19 769 aaPredicted RBP20.61■□□□□ 0.89
HOMER3-209ENST00000596482 C2orf15Q8WU43 125 aaKnown RBP20.61■□□□□ 0.89
HOMER3-209ENST00000596482 SMARCE1Q969G3 411 aa20.61■□□□□ 0.89
HOMER3-209ENST00000596482 NXPE3Q969Y0 559 aa20.61■□□□□ 0.89
HOMER3-209ENST00000596482 ZNF512Q96ME7 567 aaPredicted RBP20.61■□□□□ 0.89
HOMER3-209ENST00000596482 SEPT5Q99719 369 aaPredicted RBP20.61■□□□□ 0.89
HOMER3-209ENST00000596482 RTP3Q9BQQ7 232 aa20.61■□□□□ 0.89
HOMER3-209ENST00000596482 AVENQ9NQS1 362 aaPredicted RBP20.61■□□□□ 0.89
HOMER3-209ENST00000596482 ASAH2Q9NR71 780 aa20.61■□□□□ 0.89
HOMER3-209ENST00000596482 TRAF3IP3Q9Y228 551 aa20.61■□□□□ 0.89
HOMER3-209ENST00000596482 ZNF197O14709 1029 aa20.6■□□□□ 0.89
HOMER3-209ENST00000596482 PHACTR2O75167 634 aa20.6■□□□□ 0.89
HOMER3-209ENST00000596482 VNN2O95498 520 aa20.6■□□□□ 0.89
HOMER3-209ENST00000596482 NR2F2P24468 414 aa20.6■□□□□ 0.89
HOMER3-209ENST00000596482 CASP4P49662 377 aa20.6■□□□□ 0.89
HOMER3-209ENST00000596482 AP3M2P53677 418 aa20.6■□□□□ 0.89
HOMER3-209ENST00000596482 EPHB3P54753 998 aa20.6■□□□□ 0.89
HOMER3-209ENST00000596482 BIRC3Q13489 604 aa20.6■□□□□ 0.89
HOMER3-209ENST00000596482 CYP4A22Q5TCH4 519 aa20.6■□□□□ 0.89
HOMER3-209ENST00000596482 CENPPQ6IPU0 288 aa20.6■□□□□ 0.89
HOMER3-209ENST00000596482 ATAD1Q8NBU5 361 aa20.6■□□□□ 0.89
HOMER3-209ENST00000596482 LEMD2Q8NC56 503 aa20.6■□□□□ 0.89
HOMER3-209ENST00000596482 ITFG1Q8TB96 612 aa20.6■□□□□ 0.89
HOMER3-209ENST00000596482 ING5Q8WYH8 240 aa20.6■□□□□ 0.89
HOMER3-209ENST00000596482 FGF13Q92913 245 aa20.6■□□□□ 0.89
HOMER3-209ENST00000596482 GSDMAQ96QA5 445 aa20.6■□□□□ 0.89
HOMER3-209ENST00000596482 DDX43Q9NXZ2 648 aaKnown RBP20.6■□□□□ 0.89
HOMER3-209ENST00000596482 HSFX1Q9UBD0 423 aa20.6■□□□□ 0.89
HOMER3-209ENST00000596482 RPL13P26373 211 aaKnown RBP20.59■□□□□ 0.89
HOMER3-209ENST00000596482 PCSK1P29120 753 aa20.59■□□□□ 0.89
HOMER3-209ENST00000596482 LHX1P48742 406 aa20.59■□□□□ 0.89
HOMER3-209ENST00000596482 TNNC1P63316 161 aa20.59■□□□□ 0.89
HOMER3-209ENST00000596482 NFIL3Q16649 462 aa20.59■□□□□ 0.89
HOMER3-209ENST00000596482 MGAT5BQ3V5L5 792 aa20.59■□□□□ 0.89
HOMER3-209ENST00000596482 SCARA3Q6AZY7 606 aa20.59■□□□□ 0.89
HOMER3-209ENST00000596482 MTSS1LQ765P7 747 aa20.59■□□□□ 0.89
HOMER3-209ENST00000596482 NPAS3Q8IXF0 933 aa20.59■□□□□ 0.89
HOMER3-209ENST00000596482 SMYD4Q8IYR2 804 aaPredicted RBP20.59■□□□□ 0.89
HOMER3-209ENST00000596482 SPPL2BQ8TCT7 592 aa20.59■□□□□ 0.89
HOMER3-209ENST00000596482 PARD3BQ8TEW8 1205 aa20.59■□□□□ 0.89
HOMER3-209ENST00000596482 GTPBP4Q9BZE4 634 aaKnown RBP20.59■□□□□ 0.89
HOMER3-209ENST00000596482 CRISPLD1Q9H336 500 aa20.59■□□□□ 0.89
HOMER3-209ENST00000596482 ABI2Q9NYB9 513 aaPredicted RBP20.59■□□□□ 0.89
HOMER3-209ENST00000596482 CEP72Q9P209 647 aa20.59■□□□□ 0.89
HOMER3-209ENST00000596482 DUSP12Q9UNI6 340 aa20.59■□□□□ 0.89
HOMER3-209ENST00000596482 HCN4Q9Y3Q4 1203 aa20.59■□□□□ 0.89
HOMER3-209ENST00000596482 LRRIQ3A6PVS8 624 aaPredicted RBP20.58■□□□□ 0.89
HOMER3-209ENST00000596482 COL9A1P20849 921 aa20.58■□□□□ 0.89
HOMER3-209ENST00000596482 TUFMP49411 452 aaKnown RBP20.58■□□□□ 0.89
HOMER3-209ENST00000596482 HTR4Q13639 388 aa20.58■□□□□ 0.89
HOMER3-209ENST00000596482 VEPH1Q14D04 833 aa20.58■□□□□ 0.89
HOMER3-209ENST00000596482 NFE2Q16621 373 aaPredicted RBP20.58■□□□□ 0.89
HOMER3-209ENST00000596482 SLC5A9Q2M3M2 681 aa20.58■□□□□ 0.89
HOMER3-209ENST00000596482 ZNF658Q5TYW1 1059 aaPredicted RBP20.58■□□□□ 0.89
HOMER3-209ENST00000596482 HFE2Q6ZVN8 426 aa20.58■□□□□ 0.89
HOMER3-209ENST00000596482 DPH6Q7L8W6 267 aa20.58■□□□□ 0.89
HOMER3-209ENST00000596482 TTC9BQ8N6N2 239 aa20.58■□□□□ 0.89
HOMER3-209ENST00000596482 FAM200AQ8TCP9 573 aa20.58■□□□□ 0.89
HOMER3-209ENST00000596482 MMS19Q96T76 1030 aa20.58■□□□□ 0.89
HOMER3-209ENST00000596482 ACBD6Q9BR61 282 aa20.58■□□□□ 0.89
HOMER3-209ENST00000596482 GZF1Q9H116 711 aaPredicted RBP20.58■□□□□ 0.89
HOMER3-209ENST00000596482 SMOC2Q9H3U7 446 aa20.58■□□□□ 0.89
HOMER3-209ENST00000596482 SLC27A5Q9Y2P5 690 aa20.58■□□□□ 0.89
HOMER3-209ENST00000596482 PCDHB5Q9Y5E4 795 aa20.58■□□□□ 0.89
HOMER3-209ENST00000596482 MAPK13O15264 365 aa20.57■□□□□ 0.88
HOMER3-209ENST00000596482 MYL4P12829 197 aa20.57■□□□□ 0.88
HOMER3-209ENST00000596482 KRT13P13646 458 aa20.57■□□□□ 0.88
HOMER3-209ENST00000596482 CEBPBP17676 345 aa20.57■□□□□ 0.88
HOMER3-209ENST00000596482 ACAT1P24752 427 aaKnown RBP20.57■□□□□ 0.88
HOMER3-209ENST00000596482 SOWAHAQ2M3V2 549 aa20.57■□□□□ 0.88
HOMER3-209ENST00000596482 INTS6LQ5JSJ4 861 aaKnown RBP20.57■□□□□ 0.88
HOMER3-209ENST00000596482 PRSS36Q5K4E3 855 aa20.57■□□□□ 0.88
HOMER3-209ENST00000596482 ITIH5Q86UX2 942 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms