RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 PCDHB18PQ96TA0 734 aa15.73■□□□□ 0.11
SHKBP1-211ENST00000595945 HTATIP2Q9BUP3 242 aa15.73■□□□□ 0.11
SHKBP1-211ENST00000595945 MRPL9Q9BYD2 267 aaKnown RBP15.73■□□□□ 0.11
SHKBP1-211ENST00000595945 NRDE2Q9H7Z3 1164 aa15.73■□□□□ 0.11
SHKBP1-211ENST00000595945 RC3H2Q9HBD1 1191 aaKnown RBP15.73■□□□□ 0.11
SHKBP1-211ENST00000595945 PCDH10Q9P2E7 1040 aa15.73■□□□□ 0.11
SHKBP1-211ENST00000595945 PRKAG2Q9UGJ0 569 aa15.73■□□□□ 0.11
SHKBP1-211ENST00000595945 NAGPAQ9UK23 515 aa15.73■□□□□ 0.11
SHKBP1-211ENST00000595945 TBKBP1A7MCY6 615 aa15.72■□□□□ 0.11
SHKBP1-211ENST00000595945 M0QZQ0 153 aa15.72■□□□□ 0.11
SHKBP1-211ENST00000595945 CCP110O43303 1012 aa15.72■□□□□ 0.11
SHKBP1-211ENST00000595945 HUS1O60921 280 aa15.72■□□□□ 0.11
SHKBP1-211ENST00000595945 DGKIO75912 1065 aa15.72■□□□□ 0.11
SHKBP1-211ENST00000595945 AMHP03971 560 aa15.72■□□□□ 0.11
SHKBP1-211ENST00000595945 MMEP08473 750 aa15.72■□□□□ 0.11
SHKBP1-211ENST00000595945 GNA15P30679 374 aa15.72■□□□□ 0.11
SHKBP1-211ENST00000595945 FPGSQ05932 587 aa15.72■□□□□ 0.11
SHKBP1-211ENST00000595945 SPA17Q15506 151 aa15.72■□□□□ 0.11
SHKBP1-211ENST00000595945 TIGD5Q53EQ6 642 aa15.72■□□□□ 0.11
SHKBP1-211ENST00000595945 OSTM1Q86WC4 334 aa15.72■□□□□ 0.11
SHKBP1-211ENST00000595945 PDCL2Q8N4E4 241 aa15.72■□□□□ 0.11
SHKBP1-211ENST00000595945 TFAP2BQ92481 460 aa15.72■□□□□ 0.11
SHKBP1-211ENST00000595945 RABGGTAQ92696 567 aa15.72■□□□□ 0.11
SHKBP1-211ENST00000595945 ZNF689Q96CS4 500 aaPredicted RBP15.72■□□□□ 0.11
SHKBP1-211ENST00000595945 ZSWIM1Q9BR11 485 aa15.72■□□□□ 0.11
SHKBP1-211ENST00000595945 TMEM175Q9BSA9 504 aa15.72■□□□□ 0.11
SHKBP1-211ENST00000595945 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.72■□□□□ 0.11
SHKBP1-211ENST00000595945 PCDHA13Q9Y5I0 950 aa15.72■□□□□ 0.11
SHKBP1-211ENST00000595945 A0A0U1RQJ8 604 aa15.71■□□□□ 0.11
SHKBP1-211ENST00000595945 CYB561D2O14569 222 aa15.71■□□□□ 0.11
SHKBP1-211ENST00000595945 GABRDO14764 452 aa15.71■□□□□ 0.11
SHKBP1-211ENST00000595945 PJA2O43164 708 aa15.71■□□□□ 0.11
SHKBP1-211ENST00000595945 KIF4AO95239 1232 aa15.71■□□□□ 0.11
SHKBP1-211ENST00000595945 CYP1A1P04798 512 aaPredicted RBP15.71■□□□□ 0.11
SHKBP1-211ENST00000595945 CYP11A1P05108 521 aa15.71■□□□□ 0.11
SHKBP1-211ENST00000595945 ARHGAP25P42331 645 aa15.71■□□□□ 0.11
SHKBP1-211ENST00000595945 VAV2P52735 878 aa15.71■□□□□ 0.11
SHKBP1-211ENST00000595945 EPHB4P54760 987 aa15.71■□□□□ 0.11
SHKBP1-211ENST00000595945 DEFB103AP81534 67 aa15.71■□□□□ 0.11
SHKBP1-211ENST00000595945 ZNF394Q53GI3 561 aa15.71■□□□□ 0.11
SHKBP1-211ENST00000595945 C10orf76Q5T2E6 689 aa15.71■□□□□ 0.11
SHKBP1-211ENST00000595945 COL13A1Q5TAT6 717 aaPredicted RBP15.71■□□□□ 0.11
SHKBP1-211ENST00000595945 TAF3Q5VWG9 929 aa15.71■□□□□ 0.11
SHKBP1-211ENST00000595945 ALKBH5Q6P6C2 394 aaKnown RBP15.71■□□□□ 0.11
SHKBP1-211ENST00000595945 LRRC43Q8N309 656 aa15.71■□□□□ 0.11
SHKBP1-211ENST00000595945 APPL2Q8NEU8 664 aa15.71■□□□□ 0.11
SHKBP1-211ENST00000595945 SPATA18Q8TC71 538 aa15.71■□□□□ 0.11
SHKBP1-211ENST00000595945 ZNF606Q8WXB4 792 aa15.71■□□□□ 0.11
SHKBP1-211ENST00000595945 ATRIPQ8WXE1 791 aa15.71■□□□□ 0.11
SHKBP1-211ENST00000595945 TMEM176AQ96HP8 235 aa15.71■□□□□ 0.11
SHKBP1-211ENST00000595945 SUSD3Q96L08 255 aa15.71■□□□□ 0.11
SHKBP1-211ENST00000595945 NT5C1AQ9BXI3 368 aa15.71■□□□□ 0.11
SHKBP1-211ENST00000595945 TRMT1Q9NXH9 659 aaKnown RBP15.71■□□□□ 0.11
SHKBP1-211ENST00000595945 DNAJB4Q9UDY4 337 aa15.71■□□□□ 0.11
SHKBP1-211ENST00000595945 PCDHGC3Q9UN70 934 aa15.71■□□□□ 0.11
SHKBP1-211ENST00000595945 NLRC5Q86WI3 1866 aa15.7■□□□□ 0.1
SHKBP1-211ENST00000595945 RCCD1A6NED2 376 aa15.7■□□□□ 0.1
SHKBP1-211ENST00000595945 F8W810 466 aa15.7■□□□□ 0.1
SHKBP1-211ENST00000595945 THAP12O43422 761 aa15.7■□□□□ 0.1
SHKBP1-211ENST00000595945 B3GAT3O94766 335 aa15.7■□□□□ 0.1
SHKBP1-211ENST00000595945 IPO7O95373 1038 aaKnown RBP15.7■□□□□ 0.1
SHKBP1-211ENST00000595945 FGBP02675 491 aa15.7■□□□□ 0.1
SHKBP1-211ENST00000595945 ITGB1P05556 798 aa15.7■□□□□ 0.1
SHKBP1-211ENST00000595945 VDRP11473 427 aa15.7■□□□□ 0.1
SHKBP1-211ENST00000595945 GZMAP12544 262 aa15.7■□□□□ 0.1
SHKBP1-211ENST00000595945 BRD2P25440 801 aaKnown RBP15.7■□□□□ 0.1
SHKBP1-211ENST00000595945 MAGEA1P43355 309 aa15.7■□□□□ 0.1
SHKBP1-211ENST00000595945 BRCC3P46736 316 aa15.7■□□□□ 0.1
SHKBP1-211ENST00000595945 RNASELQ05823 741 aaKnown RBP15.7■□□□□ 0.1
SHKBP1-211ENST00000595945 CLEC16AQ2KHT3 1053 aa15.7■□□□□ 0.1
SHKBP1-211ENST00000595945 TMEM240Q5SV17 173 aa15.7■□□□□ 0.1
SHKBP1-211ENST00000595945 CCDC122Q5T0U0 273 aa15.7■□□□□ 0.1
SHKBP1-211ENST00000595945 WSCD1Q658N2 575 aa15.7■□□□□ 0.1
SHKBP1-211ENST00000595945 DSTYKQ6XUX3 929 aa15.7■□□□□ 0.1
SHKBP1-211ENST00000595945 TRIM72Q6ZMU5 477 aa15.7■□□□□ 0.1
SHKBP1-211ENST00000595945 ZNF365Q70YC5 407 aa15.7■□□□□ 0.1
SHKBP1-211ENST00000595945 ADGRF2Q8IZF7 708 aa15.7■□□□□ 0.1
SHKBP1-211ENST00000595945 CRYBG2Q8N1P7 616 aa15.7■□□□□ 0.1
SHKBP1-211ENST00000595945 TMEM86AQ8N2M4 240 aa15.7■□□□□ 0.1
SHKBP1-211ENST00000595945 FAM193BQ96PV7 902 aaPredicted RBP15.7■□□□□ 0.1
SHKBP1-211ENST00000595945 CWH43Q9H720 699 aa15.7■□□□□ 0.1
SHKBP1-211ENST00000595945 TAS2R14Q9NYV8 317 aa15.7■□□□□ 0.1
SHKBP1-211ENST00000595945 HCSTQ9UBK5 93 aa15.7■□□□□ 0.1
SHKBP1-211ENST00000595945 KIAA1257Q9ULG3 409 aa15.7■□□□□ 0.1
SHKBP1-211ENST00000595945 STXBP5LQ9Y2K9 1186 aa15.7■□□□□ 0.1
SHKBP1-211ENST00000595945 GOLGA6L9A6NEM1 432 aa15.69■□□□□ 0.1
SHKBP1-211ENST00000595945 UPP2O95045 317 aa15.69■□□□□ 0.1
SHKBP1-211ENST00000595945 CFHP08603 1231 aa15.69■□□□□ 0.1
SHKBP1-211ENST00000595945 UNGP13051 313 aaPredicted RBP15.69■□□□□ 0.1
SHKBP1-211ENST00000595945 TYMPP19971 482 aa15.69■□□□□ 0.1
SHKBP1-211ENST00000595945 GNL1P36915 607 aaPredicted RBP15.69■□□□□ 0.1
SHKBP1-211ENST00000595945 OR1G1P47890 313 aa15.69■□□□□ 0.1
SHKBP1-211ENST00000595945 SLC11A1P49279 550 aa15.69■□□□□ 0.1
SHKBP1-211ENST00000595945 ORC1Q13415 861 aa15.69■□□□□ 0.1
SHKBP1-211ENST00000595945 OR6B3Q8NGW1 331 aa15.69■□□□□ 0.1
SHKBP1-211ENST00000595945 ISCUQ9H1K1 167 aa15.69■□□□□ 0.1
SHKBP1-211ENST00000595945 SNX25Q9H3E2 840 aa15.69■□□□□ 0.1
SHKBP1-211ENST00000595945 MARCH5Q9NX47 278 aa15.69■□□□□ 0.1
SHKBP1-211ENST00000595945 INTUQ9ULD6 942 aa15.69■□□□□ 0.1
SHKBP1-211ENST00000595945 MKI67P46013 3256 aaKnown RBP15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 137.6 ms