RNA–Protein interactions for RNA: ENST00000595659.5

CCDC9-202, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 356 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-202ENST00000595659 CBWD1Q9BRT8 395 aa18.4■□□□□ 0.54
CCDC9-202ENST00000595659 ZCWPW1Q9H0M4 648 aa18.4■□□□□ 0.54
CCDC9-202ENST00000595659 ATXN3LQ9H3M9 355 aa18.4■□□□□ 0.54
CCDC9-202ENST00000595659 ZSCAN16Q9H4T2 348 aaPredicted RBP18.4■□□□□ 0.54
CCDC9-202ENST00000595659 PCDHB13Q9Y5F0 798 aa18.4■□□□□ 0.54
CCDC9-202ENST00000595659 CITO14578 2027 aa18.39■□□□□ 0.53
CCDC9-202ENST00000595659 KPNA7A9QM74 516 aa18.39■□□□□ 0.53
CCDC9-202ENST00000595659 ZNF263O14978 683 aa18.39■□□□□ 0.53
CCDC9-202ENST00000595659 LAMTOR5O43504 91 aa18.39■□□□□ 0.53
CCDC9-202ENST00000595659 IL18RAPO95256 599 aa18.39■□□□□ 0.53
CCDC9-202ENST00000595659 LMNAP02545 664 aaKnown RBP18.39■□□□□ 0.53
CCDC9-202ENST00000595659 PAX3P23760 479 aa18.39■□□□□ 0.53
CCDC9-202ENST00000595659 CSTF1Q05048 431 aaKnown RBP18.39■□□□□ 0.53
CCDC9-202ENST00000595659 FOXD4L6Q3SYB3 417 aaPredicted RBP18.39■□□□□ 0.53
CCDC9-202ENST00000595659 FOXD4L3Q6VB84 417 aaPredicted RBP18.39■□□□□ 0.53
CCDC9-202ENST00000595659 GAREM2Q75VX8 874 aa18.39■□□□□ 0.53
CCDC9-202ENST00000595659 THEM5Q8N1Q8 247 aa18.39■□□□□ 0.53
CCDC9-202ENST00000595659 GLIS3Q8NEA6 775 aa18.39■□□□□ 0.53
CCDC9-202ENST00000595659 DNASE1L2Q92874 299 aa18.39■□□□□ 0.53
CCDC9-202ENST00000595659 IRF7Q92985 503 aa18.39■□□□□ 0.53
CCDC9-202ENST00000595659 OSBPL6Q9BZF3 934 aa18.39■□□□□ 0.53
CCDC9-202ENST00000595659 DSEQ9UL01 958 aa18.39■□□□□ 0.53
CCDC9-202ENST00000595659 AGAP1Q9UPQ3 857 aa18.39■□□□□ 0.53
CCDC9-202ENST00000595659 FRMD3A2A2Y4 597 aa18.38■□□□□ 0.53
CCDC9-202ENST00000595659 GABRR2P28476 465 aa18.38■□□□□ 0.53
CCDC9-202ENST00000595659 POLR2BP30876 1174 aaKnown RBP18.38■□□□□ 0.53
CCDC9-202ENST00000595659 NASPP49321 788 aaPredicted RBP18.38■□□□□ 0.53
CCDC9-202ENST00000595659 FZD5Q13467 585 aa18.38■□□□□ 0.53
CCDC9-202ENST00000595659 TSSK4Q6SA08 328 aa18.38■□□□□ 0.53
CCDC9-202ENST00000595659 ARID3BQ8IVW6 561 aaPredicted RBP18.38■□□□□ 0.53
CCDC9-202ENST00000595659 MFSD6LQ8IWD5 586 aa18.38■□□□□ 0.53
CCDC9-202ENST00000595659 LINC00301Q8NCQ3 95 aa18.38■□□□□ 0.53
CCDC9-202ENST00000595659 TTC8Q8TAM2 541 aa18.38■□□□□ 0.53
CCDC9-202ENST00000595659 PSMG2Q969U7 264 aa18.38■□□□□ 0.53
CCDC9-202ENST00000595659 NELL2Q99435 816 aa18.38■□□□□ 0.53
CCDC9-202ENST00000595659 TRPV4Q9HBA0 871 aa18.38■□□□□ 0.53
CCDC9-202ENST00000595659 OLFML3Q9NRN5 406 aa18.38■□□□□ 0.53
CCDC9-202ENST00000595659 ABI2Q9NYB9 513 aaPredicted RBP18.38■□□□□ 0.53
CCDC9-202ENST00000595659 RBAKQ9NYW8 714 aaPredicted RBP18.38■□□□□ 0.53
CCDC9-202ENST00000595659 PIAS3Q9Y6X2 628 aa18.38■□□□□ 0.53
CCDC9-202ENST00000595659 CFAP54Q96N23 3096 aa18.38■□□□□ 0.53
CCDC9-202ENST00000595659 MYH11P35749 1972 aa18.37■□□□□ 0.53
CCDC9-202ENST00000595659 SPTLC2O15270 562 aa18.37■□□□□ 0.53
CCDC9-202ENST00000595659 NCAM2O15394 837 aa18.37■□□□□ 0.53
CCDC9-202ENST00000595659 ITGB3P05106 788 aa18.37■□□□□ 0.53
CCDC9-202ENST00000595659 ATF6P18850 670 aa18.37■□□□□ 0.53
CCDC9-202ENST00000595659 CYP4F8P98187 520 aa18.37■□□□□ 0.53
CCDC9-202ENST00000595659 POU5F1Q01860 360 aaKnown RBP18.37■□□□□ 0.53
CCDC9-202ENST00000595659 SV2CQ496J9 727 aa18.37■□□□□ 0.53
CCDC9-202ENST00000595659 GPR158Q5T848 1215 aa18.37■□□□□ 0.53
CCDC9-202ENST00000595659 BRSK2Q8IWQ3 736 aa18.37■□□□□ 0.53
CCDC9-202ENST00000595659 YAF2Q8IY57 180 aa18.37■□□□□ 0.53
CCDC9-202ENST00000595659 C1orf127Q8N9H9 656 aa18.37■□□□□ 0.53
CCDC9-202ENST00000595659 DEPDC1BQ8WUY9 529 aa18.37■□□□□ 0.53
CCDC9-202ENST00000595659 FAM3CQ92520 227 aa18.37■□□□□ 0.53
CCDC9-202ENST00000595659 CLDN23Q96B33 292 aa18.37■□□□□ 0.53
CCDC9-202ENST00000595659 LRRC3BQ96PB8 259 aa18.37■□□□□ 0.53
CCDC9-202ENST00000595659 MKNK1Q9BUB5 465 aa18.37■□□□□ 0.53
CCDC9-202ENST00000595659 GPR88Q9GZN0 384 aa18.37■□□□□ 0.53
CCDC9-202ENST00000595659 PDE11AQ9HCR9 933 aa18.37■□□□□ 0.53
CCDC9-202ENST00000595659 TMLHEQ9NVH6 421 aa18.37■□□□□ 0.53
CCDC9-202ENST00000595659 MRPS17Q9Y2R5 130 aaKnown RBP18.37■□□□□ 0.53
CCDC9-202ENST00000595659 ASB3Q9Y575 518 aa18.37■□□□□ 0.53
CCDC9-202ENST00000595659 MYH15Q9Y2K3 1946 aa18.37■□□□□ 0.53
CCDC9-202ENST00000595659 EXTL3O43909 919 aa18.36■□□□□ 0.53
CCDC9-202ENST00000595659 KRT19P08727 400 aa18.36■□□□□ 0.53
CCDC9-202ENST00000595659 GARTP22102 1010 aa18.36■□□□□ 0.53
CCDC9-202ENST00000595659 SOX9P48436 509 aa18.36■□□□□ 0.53
CCDC9-202ENST00000595659 TUFMP49411 452 aaKnown RBP18.36■□□□□ 0.53
CCDC9-202ENST00000595659 MTAPQ13126 283 aa18.36■□□□□ 0.53
CCDC9-202ENST00000595659 LMBRD2Q68DH5 695 aaPredicted RBP18.36■□□□□ 0.53
CCDC9-202ENST00000595659 ZC3H14Q6PJT7 736 aaKnown RBP18.36■□□□□ 0.53
CCDC9-202ENST00000595659 ITIH5Q86UX2 942 aa18.36■□□□□ 0.53
CCDC9-202ENST00000595659 CCDC65Q8IXS2 484 aa18.36■□□□□ 0.53
CCDC9-202ENST00000595659 PDCL2Q8N4E4 241 aa18.36■□□□□ 0.53
CCDC9-202ENST00000595659 CSGALNACT2Q8N6G5 542 aa18.36■□□□□ 0.53
CCDC9-202ENST00000595659 STKLD1Q8NE28 680 aa18.36■□□□□ 0.53
CCDC9-202ENST00000595659 DHX58Q96C10 678 aa18.36■□□□□ 0.53
CCDC9-202ENST00000595659 ZFYVE19Q96K21 471 aa18.36■□□□□ 0.53
CCDC9-202ENST00000595659 SEMA4AQ9H3S1 761 aa18.36■□□□□ 0.53
CCDC9-202ENST00000595659 MORC2Q9Y6X9 1032 aaPredicted RBP18.36■□□□□ 0.53
CCDC9-202ENST00000595659 MAN2B1O00754 1011 aa18.35■□□□□ 0.53
CCDC9-202ENST00000595659 ACAT1P24752 427 aaKnown RBP18.35■□□□□ 0.53
CCDC9-202ENST00000595659 CCNE1P24864 410 aa18.35■□□□□ 0.53
CCDC9-202ENST00000595659 GPR15P49685 360 aa18.35■□□□□ 0.53
CCDC9-202ENST00000595659 BFSP1Q12934 665 aa18.35■□□□□ 0.53
CCDC9-202ENST00000595659 VEPH1Q14D04 833 aa18.35■□□□□ 0.53
CCDC9-202ENST00000595659 TAF12Q16514 161 aa18.35■□□□□ 0.53
CCDC9-202ENST00000595659 SDHAF4Q5VUM1 108 aa18.35■□□□□ 0.53
CCDC9-202ENST00000595659 NT5DC4Q86YG4 428 aa18.35■□□□□ 0.53
CCDC9-202ENST00000595659 ZNF687Q8N1G0 1237 aa18.35■□□□□ 0.53
CCDC9-202ENST00000595659 CSGALNACT1Q8TDX6 532 aa18.35■□□□□ 0.53
CCDC9-202ENST00000595659 ZNF560Q96MR9 790 aa18.35■□□□□ 0.53
CCDC9-202ENST00000595659 ZNF396Q96N95 335 aaPredicted RBP18.35■□□□□ 0.53
CCDC9-202ENST00000595659 HINFPQ9BQA5 517 aa18.35■□□□□ 0.53
CCDC9-202ENST00000595659 PI4K2AQ9BTU6 479 aa18.35■□□□□ 0.53
CCDC9-202ENST00000595659 SMG9Q9H0W8 520 aaKnown RBP18.35■□□□□ 0.53
CCDC9-202ENST00000595659 TMEM206Q9H813 350 aa18.35■□□□□ 0.53
CCDC9-202ENST00000595659 LMAN1LQ9HAT1 526 aa18.35■□□□□ 0.53
CCDC9-202ENST00000595659 IL21Q9HBE4 155 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms