RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 CDR1P51861 262 aa11.82□□□□□ -0.52
SHKBP1-206ENST00000595523 NFIL3Q16649 462 aa11.82□□□□□ -0.52
SHKBP1-206ENST00000595523 PTPN21Q16825 1174 aa11.82□□□□□ -0.52
SHKBP1-206ENST00000595523 SLC5A9Q2M3M2 681 aa11.82□□□□□ -0.52
SHKBP1-206ENST00000595523 SOWAHAQ2M3V2 549 aa11.82□□□□□ -0.52
SHKBP1-206ENST00000595523 C1orf220Q5T0J3 134 aa11.82□□□□□ -0.52
SHKBP1-206ENST00000595523 CENPPQ6IPU0 288 aa11.82□□□□□ -0.52
SHKBP1-206ENST00000595523 POTEHQ6S545 545 aa11.82□□□□□ -0.52
SHKBP1-206ENST00000595523 GET4Q7L5D6 327 aaPredicted RBP11.82□□□□□ -0.52
SHKBP1-206ENST00000595523 OSTM1Q86WC4 334 aa11.82□□□□□ -0.52
SHKBP1-206ENST00000595523 ELOA2Q8IYF1 753 aaPredicted RBP11.82□□□□□ -0.52
SHKBP1-206ENST00000595523 ATAD1Q8NBU5 361 aa11.82□□□□□ -0.52
SHKBP1-206ENST00000595523 ITFG1Q8TB96 612 aa11.82□□□□□ -0.52
SHKBP1-206ENST00000595523 CCDC34Q96HJ3 373 aa11.82□□□□□ -0.52
SHKBP1-206ENST00000595523 HPDLQ96IR7 371 aa11.82□□□□□ -0.52
SHKBP1-206ENST00000595523 CEP72Q9P209 647 aa11.82□□□□□ -0.52
SHKBP1-206ENST00000595523 LIMD1Q9UGP4 676 aa11.82□□□□□ -0.52
SHKBP1-206ENST00000595523 MAFFQ9ULX9 164 aa11.82□□□□□ -0.52
SHKBP1-206ENST00000595523 POLIQ9UNA4 740 aa11.82□□□□□ -0.52
SHKBP1-206ENST00000595523 YIPF1Q9Y548 306 aa11.82□□□□□ -0.52
SHKBP1-206ENST00000595523 SNX9Q9Y5X1 595 aa11.82□□□□□ -0.52
SHKBP1-206ENST00000595523 GABRDO14764 452 aa11.81□□□□□ -0.52
SHKBP1-206ENST00000595523 GPR37L1O60883 481 aa11.81□□□□□ -0.52
SHKBP1-206ENST00000595523 PRPF40AO75400 957 aaKnown RBP11.81□□□□□ -0.52
SHKBP1-206ENST00000595523 AKAP3O75969 853 aa11.81□□□□□ -0.52
SHKBP1-206ENST00000595523 KIF20AO95235 890 aa11.81□□□□□ -0.52
SHKBP1-206ENST00000595523 BMP6P22004 513 aa11.81□□□□□ -0.52
SHKBP1-206ENST00000595523 FSHRP23945 695 aa11.81□□□□□ -0.52
SHKBP1-206ENST00000595523 NR2F2P24468 414 aa11.81□□□□□ -0.52
SHKBP1-206ENST00000595523 GBP2P32456 591 aaPredicted RBP11.81□□□□□ -0.52
SHKBP1-206ENST00000595523 ELF1P32519 619 aa11.81□□□□□ -0.52
SHKBP1-206ENST00000595523 PRCPP42785 496 aa11.81□□□□□ -0.52
SHKBP1-206ENST00000595523 ZXDAP98168 799 aa11.81□□□□□ -0.52
SHKBP1-206ENST00000595523 TWF1Q12792 350 aa11.81□□□□□ -0.52
SHKBP1-206ENST00000595523 DUSP4Q13115 394 aa11.81□□□□□ -0.52
SHKBP1-206ENST00000595523 CCDC142Q17RM4 750 aa11.81□□□□□ -0.52
SHKBP1-206ENST00000595523 COBLL1Q53SF7 1204 aa11.81□□□□□ -0.52
SHKBP1-206ENST00000595523 ZNF658Q5TYW1 1059 aaPredicted RBP11.81□□□□□ -0.52
SHKBP1-206ENST00000595523 TDRD10Q5VZ19 366 aaKnown RBP11.81□□□□□ -0.52
SHKBP1-206ENST00000595523 PLCD3Q8N3E9 789 aa11.81□□□□□ -0.52
SHKBP1-206ENST00000595523 TOP6BLQ8N6T0 577 aa11.81□□□□□ -0.52
SHKBP1-206ENST00000595523 KBTBD7Q8WVZ9 684 aa11.81□□□□□ -0.52
SHKBP1-206ENST00000595523 EDAQ92838 391 aa11.81□□□□□ -0.52
SHKBP1-206ENST00000595523 ACSF2Q96CM8 615 aaPredicted RBP11.81□□□□□ -0.52
SHKBP1-206ENST00000595523 FNBP1Q96RU3 617 aa11.81□□□□□ -0.52
SHKBP1-206ENST00000595523 PKMYT1Q99640 499 aa11.81□□□□□ -0.52
SHKBP1-206ENST00000595523 C1QTNF1Q9BXJ1 281 aa11.81□□□□□ -0.52
SHKBP1-206ENST00000595523 XYLT2Q9H1B5 865 aa11.81□□□□□ -0.52
SHKBP1-206ENST00000595523 DNAJC25Q9H1X3 360 aa11.81□□□□□ -0.52
SHKBP1-206ENST00000595523 TMLHEQ9NVH6 421 aa11.81□□□□□ -0.52
SHKBP1-206ENST00000595523 RMND1Q9NWS8 449 aa11.81□□□□□ -0.52
SHKBP1-206ENST00000595523 EPS15L1Q9UBC2 864 aa11.81□□□□□ -0.52
SHKBP1-206ENST00000595523 SLC27A5Q9Y2P5 690 aa11.81□□□□□ -0.52
SHKBP1-206ENST00000595523 NME7Q9Y5B8 376 aa11.81□□□□□ -0.52
SHKBP1-206ENST00000595523 MAPK13O15264 365 aa11.8□□□□□ -0.52
SHKBP1-206ENST00000595523 KINO60870 393 aaKnown RBP11.8□□□□□ -0.52
SHKBP1-206ENST00000595523 HUS1O60921 280 aa11.8□□□□□ -0.52
SHKBP1-206ENST00000595523 SOAT2O75908 522 aa11.8□□□□□ -0.52
SHKBP1-206ENST00000595523 SMC2O95347 1197 aa11.8□□□□□ -0.52
SHKBP1-206ENST00000595523 VNN1O95497 513 aa11.8□□□□□ -0.52
SHKBP1-206ENST00000595523 LRG1P02750 347 aa11.8□□□□□ -0.52
SHKBP1-206ENST00000595523 C4BPAP04003 597 aaKnown RBP11.8□□□□□ -0.52
SHKBP1-206ENST00000595523 RHOP08100 348 aa11.8□□□□□ -0.52
SHKBP1-206ENST00000595523 LAMP2P13473 410 aa11.8□□□□□ -0.52
SHKBP1-206ENST00000595523 CD44P16070 742 aaKnown RBP11.8□□□□□ -0.52
SHKBP1-206ENST00000595523 ACAT1P24752 427 aaKnown RBP11.8□□□□□ -0.52
SHKBP1-206ENST00000595523 CCR2P41597 374 aa11.8□□□□□ -0.52
SHKBP1-206ENST00000595523 PMS1P54277 932 aaKnown RBP11.8□□□□□ -0.52
SHKBP1-206ENST00000595523 MCCD1P59942 119 aaPredicted RBP11.8□□□□□ -0.52
SHKBP1-206ENST00000595523 MYL6P60660 151 aa11.8□□□□□ -0.52
SHKBP1-206ENST00000595523 MYO1EQ12965 1108 aa11.8□□□□□ -0.52
SHKBP1-206ENST00000595523 PABPC1LQ4VXU2 614 aaKnown RBP11.8□□□□□ -0.52
SHKBP1-206ENST00000595523 SLC39A12Q504Y0 691 aa11.8□□□□□ -0.52
SHKBP1-206ENST00000595523 PRSS36Q5K4E3 855 aa11.8□□□□□ -0.52
SHKBP1-206ENST00000595523 CEP135Q66GS9 1140 aa11.8□□□□□ -0.52
SHKBP1-206ENST00000595523 METTL23Q86XA0 190 aa11.8□□□□□ -0.52
SHKBP1-206ENST00000595523 ADGRF2Q8IZF7 708 aa11.8□□□□□ -0.52
SHKBP1-206ENST00000595523 HS6ST3Q8IZP7 471 aa11.8□□□□□ -0.52
SHKBP1-206ENST00000595523 ST13P5Q8NFI4 369 aaPredicted RBP11.8□□□□□ -0.52
SHKBP1-206ENST00000595523 TMC2Q8TDI7 906 aa11.8□□□□□ -0.52
SHKBP1-206ENST00000595523 RSAD2Q8WXG1 361 aa11.8□□□□□ -0.52
SHKBP1-206ENST00000595523 FGF13Q92913 245 aa11.8□□□□□ -0.52
SHKBP1-206ENST00000595523 SMARCE1Q969G3 411 aa11.8□□□□□ -0.52
SHKBP1-206ENST00000595523 ELMO3Q96BJ8 720 aa11.8□□□□□ -0.52
SHKBP1-206ENST00000595523 EEF2KMTQ96G04 330 aa11.8□□□□□ -0.52
SHKBP1-206ENST00000595523 LRFN3Q9BTN0 628 aa11.8□□□□□ -0.52
SHKBP1-206ENST00000595523 LRRC3Q9BY71 257 aa11.8□□□□□ -0.52
SHKBP1-206ENST00000595523 KCNK12Q9HB15 430 aa11.8□□□□□ -0.52
SHKBP1-206ENST00000595523 AVENQ9NQS1 362 aaPredicted RBP11.8□□□□□ -0.52
SHKBP1-206ENST00000595523 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.8□□□□□ -0.52
SHKBP1-206ENST00000595523 MAN1B1Q9UKM7 699 aa11.8□□□□□ -0.52
SHKBP1-206ENST00000595523 SORCS3Q9UPU3 1222 aa11.8□□□□□ -0.52
SHKBP1-206ENST00000595523 PATJQ8NI35 1801 aa11.8□□□□□ -0.52
SHKBP1-206ENST00000595523 KIF26AQ9ULI4 1882 aaPredicted RBP11.8□□□□□ -0.52
SHKBP1-206ENST00000595523 COL4A2P08572 1712 aa11.8□□□□□ -0.52
SHKBP1-206ENST00000595523 ANHXE9PGG2 379 aa11.79□□□□□ -0.52
SHKBP1-206ENST00000595523 MOSPD3O75425 235 aa11.79□□□□□ -0.52
SHKBP1-206ENST00000595523 STAU1O95793 577 aaKnown RBP11.79□□□□□ -0.52
SHKBP1-206ENST00000595523 PTPN2P17706 415 aa11.79□□□□□ -0.52
SHKBP1-206ENST00000595523 ATF6P18850 670 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms