RNA–Protein interactions for RNA: ENST00000594090.5

VRK3-206, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best)

Gene VRK3, Length 1,448 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-206ENST00000594090 SPATA18Q8TC71 538 aa15.65■□□□□ 0.1
VRK3-206ENST00000594090 EEF2KMTQ96G04 330 aa15.65■□□□□ 0.1
VRK3-206ENST00000594090 DHTKD1Q96HY7 919 aaPredicted RBP15.65■□□□□ 0.1
VRK3-206ENST00000594090 RPGRIP1Q96KN7 1286 aa15.65■□□□□ 0.1
VRK3-206ENST00000594090 MKNK1Q9BUB5 465 aa15.65■□□□□ 0.1
VRK3-206ENST00000594090 CLSTN2Q9H4D0 955 aa15.65■□□□□ 0.1
VRK3-206ENST00000594090 PIDD1Q9HB75 910 aa15.65■□□□□ 0.1
VRK3-206ENST00000594090 CYP4F11Q9HBI6 524 aa15.65■□□□□ 0.1
VRK3-206ENST00000594090 KIAA1468Q9P260 1216 aa15.65■□□□□ 0.1
VRK3-206ENST00000594090 MAFFQ9ULX9 164 aa15.65■□□□□ 0.1
VRK3-206ENST00000594090 CLUHO75153 1309 aa15.64■□□□□ 0.09
VRK3-206ENST00000594090 PPP1R3GB7ZBB8 358 aa15.64■□□□□ 0.09
VRK3-206ENST00000594090 IKBKBO14920 756 aa15.64■□□□□ 0.09
VRK3-206ENST00000594090 PHACTR2O75167 634 aa15.64■□□□□ 0.09
VRK3-206ENST00000594090 SEC24AO95486 1093 aa15.64■□□□□ 0.09
VRK3-206ENST00000594090 VNN2O95498 520 aa15.64■□□□□ 0.09
VRK3-206ENST00000594090 POU2F2P09086 479 aa15.64■□□□□ 0.09
VRK3-206ENST00000594090 EPB41P11171 864 aaKnown RBP15.64■□□□□ 0.09
VRK3-206ENST00000594090 KRT13P13646 458 aa15.64■□□□□ 0.09
VRK3-206ENST00000594090 FKBP3Q00688 224 aaKnown RBP15.64■□□□□ 0.09
VRK3-206ENST00000594090 ENPEPQ07075 957 aa15.64■□□□□ 0.09
VRK3-206ENST00000594090 GPR17Q13304 367 aa15.64■□□□□ 0.09
VRK3-206ENST00000594090 TRPC3Q13507 836 aa15.64■□□□□ 0.09
VRK3-206ENST00000594090 KLHL10Q6JEL2 608 aa15.64■□□□□ 0.09
VRK3-206ENST00000594090 THEM5Q8N1Q8 247 aa15.64■□□□□ 0.09
VRK3-206ENST00000594090 TMEM86AQ8N2M4 240 aa15.64■□□□□ 0.09
VRK3-206ENST00000594090 TRIML1Q8N9V2 468 aa15.64■□□□□ 0.09
VRK3-206ENST00000594090 PGLYRP2Q96PD5 576 aa15.64■□□□□ 0.09
VRK3-206ENST00000594090 ZCWPW1Q9H0M4 648 aa15.64■□□□□ 0.09
VRK3-206ENST00000594090 XYLT2Q9H1B5 865 aa15.64■□□□□ 0.09
VRK3-206ENST00000594090 WDR6Q9NNW5 1121 aaKnown RBP15.64■□□□□ 0.09
VRK3-206ENST00000594090 NR2E1Q9Y466 385 aa15.64■□□□□ 0.09
VRK3-206ENST00000594090 INSL5Q9Y5Q6 135 aa15.64■□□□□ 0.09
VRK3-206ENST00000594090 MTMR11A4FU01 709 aa15.63■□□□□ 0.09
VRK3-206ENST00000594090 STAU1O95793 577 aaKnown RBP15.63■□□□□ 0.09
VRK3-206ENST00000594090 TRIM49P0CI25 452 aa15.63■□□□□ 0.09
VRK3-206ENST00000594090 TRIM49CP0CI26 452 aa15.63■□□□□ 0.09
VRK3-206ENST00000594090 MYL6P60660 151 aa15.63■□□□□ 0.09
VRK3-206ENST00000594090 SOWAHAQ2M3V2 549 aa15.63■□□□□ 0.09
VRK3-206ENST00000594090 ZACNQ401N2 412 aa15.63■□□□□ 0.09
VRK3-206ENST00000594090 LIMS2Q7Z4I7 341 aa15.63■□□□□ 0.09
VRK3-206ENST00000594090 OSTM1Q86WC4 334 aa15.63■□□□□ 0.09
VRK3-206ENST00000594090 ADGRF2Q8IZF7 708 aa15.63■□□□□ 0.09
VRK3-206ENST00000594090 SYAP1Q96A49 352 aaPredicted RBP15.63■□□□□ 0.09
VRK3-206ENST00000594090 VRTNQ9H8Y1 702 aa15.63■□□□□ 0.09
VRK3-206ENST00000594090 DDX43Q9NXZ2 648 aaKnown RBP15.63■□□□□ 0.09
VRK3-206ENST00000594090 POLIQ9UNA4 740 aa15.63■□□□□ 0.09
VRK3-206ENST00000594090 CTNND2Q9UQB3 1225 aa15.63■□□□□ 0.09
VRK3-206ENST00000594090 C2CD4DB7Z1M9 353 aa15.62■□□□□ 0.09
VRK3-206ENST00000594090 GOLGA6L22H0YM25 854 aa15.62■□□□□ 0.09
VRK3-206ENST00000594090 GABRDO14764 452 aa15.62■□□□□ 0.09
VRK3-206ENST00000594090 SLC16A3O15427 465 aaKnown RBP15.62■□□□□ 0.09
VRK3-206ENST00000594090 XYLBO75191 536 aa15.62■□□□□ 0.09
VRK3-206ENST00000594090 VNN1O95497 513 aa15.62■□□□□ 0.09
VRK3-206ENST00000594090 LRG1P02750 347 aa15.62■□□□□ 0.09
VRK3-206ENST00000594090 ATICP31939 592 aa15.62■□□□□ 0.09
VRK3-206ENST00000594090 NCOA4Q13772 614 aa15.62■□□□□ 0.09
VRK3-206ENST00000594090 SLC39A12Q504Y0 691 aa15.62■□□□□ 0.09
VRK3-206ENST00000594090 TTI2Q6NXR4 508 aa15.62■□□□□ 0.09
VRK3-206ENST00000594090 SV2AQ7L0J3 742 aa15.62■□□□□ 0.09
VRK3-206ENST00000594090 DPH6Q7L8W6 267 aa15.62■□□□□ 0.09
VRK3-206ENST00000594090 GRASPQ7Z6J2 395 aaPredicted RBP15.62■□□□□ 0.09
VRK3-206ENST00000594090 TDRD5Q8NAT2 981 aaKnown RBP15.62■□□□□ 0.09
VRK3-206ENST00000594090 KBTBD7Q8WVZ9 684 aa15.62■□□□□ 0.09
VRK3-206ENST00000594090 NELFBQ8WX92 580 aa15.62■□□□□ 0.09
VRK3-206ENST00000594090 MMS19Q96T76 1030 aa15.62■□□□□ 0.09
VRK3-206ENST00000594090 NUP62CLQ9H1M0 184 aa15.62■□□□□ 0.09
VRK3-206ENST00000594090 CRISPLD1Q9H336 500 aa15.62■□□□□ 0.09
VRK3-206ENST00000594090 USTQ9Y2C2 406 aa15.62■□□□□ 0.09
VRK3-206ENST00000594090 YIPF1Q9Y548 306 aa15.62■□□□□ 0.09
VRK3-206ENST00000594090 LHX1P48742 406 aa15.61■□□□□ 0.09
VRK3-206ENST00000594090 MCCD1P59942 119 aaPredicted RBP15.61■□□□□ 0.09
VRK3-206ENST00000594090 TNNC1P63316 161 aa15.61■□□□□ 0.09
VRK3-206ENST00000594090 MYL7Q01449 175 aa15.61■□□□□ 0.09
VRK3-206ENST00000594090 TSPY1Q01534 308 aa15.61■□□□□ 0.09
VRK3-206ENST00000594090 PPP3CAQ08209 521 aa15.61■□□□□ 0.09
VRK3-206ENST00000594090 PAK1Q13153 545 aa15.61■□□□□ 0.09
VRK3-206ENST00000594090 ZNF699Q32M78 642 aa15.61■□□□□ 0.09
VRK3-206ENST00000594090 WDR72Q3MJ13 1102 aa15.61■□□□□ 0.09
VRK3-206ENST00000594090 FOXR2Q6PJQ5 311 aa15.61■□□□□ 0.09
VRK3-206ENST00000594090 ATAD1Q8NBU5 361 aa15.61■□□□□ 0.09
VRK3-206ENST00000594090 DUSP9Q99956 384 aaKnown RBP15.61■□□□□ 0.09
VRK3-206ENST00000594090 ACBD6Q9BR61 282 aa15.61■□□□□ 0.09
VRK3-206ENST00000594090 HCFC1R1Q9NWW0 138 aa15.61■□□□□ 0.09
VRK3-206ENST00000594090 BICDL2A1A5D9 508 aa15.6■□□□□ 0.09
VRK3-206ENST00000594090 HCRTO43612 131 aa15.6■□□□□ 0.09
VRK3-206ENST00000594090 CLSTN1O94985 981 aa15.6■□□□□ 0.09
VRK3-206ENST00000594090 WARSP23381 471 aaKnown RBP15.6■□□□□ 0.09
VRK3-206ENST00000594090 ACAT1P24752 427 aaKnown RBP15.6■□□□□ 0.09
VRK3-206ENST00000594090 PCSK1P29120 753 aa15.6■□□□□ 0.09
VRK3-206ENST00000594090 PIK3CAP42336 1068 aa15.6■□□□□ 0.09
VRK3-206ENST00000594090 GCLMP48507 274 aa15.6■□□□□ 0.09
VRK3-206ENST00000594090 NTHL1P78549 312 aa15.6■□□□□ 0.09
VRK3-206ENST00000594090 TWF1Q12792 350 aa15.6■□□□□ 0.09
VRK3-206ENST00000594090 SMARCB1Q12824 385 aa15.6■□□□□ 0.09
VRK3-206ENST00000594090 DUSP4Q13115 394 aa15.6■□□□□ 0.09
VRK3-206ENST00000594090 INTS6LQ5JSJ4 861 aaKnown RBP15.6■□□□□ 0.09
VRK3-206ENST00000594090 GET4Q7L5D6 327 aaPredicted RBP15.6■□□□□ 0.09
VRK3-206ENST00000594090 OTOP3Q7RTS5 596 aa15.6■□□□□ 0.09
VRK3-206ENST00000594090 LRRTM3Q86VH5 581 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms