RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 HSFX1Q9UBD0 423 aa24.53■■□□□ 1.52
SSBP4-203ENST00000593641 GMEB2Q9UKD1 530 aa24.53■■□□□ 1.52
SSBP4-203ENST00000593641 DSEQ9UL01 958 aa24.53■■□□□ 1.52
SSBP4-203ENST00000593641 NCOR2Q9Y618 2525 aa24.53■■□□□ 1.52
SSBP4-203ENST00000593641 ZNF638Q14966 1978 aaKnown RBP24.53■■□□□ 1.52
SSBP4-203ENST00000593641 PIRO00625 290 aa24.52■■□□□ 1.52
SSBP4-203ENST00000593641 GABRR2P28476 465 aa24.52■■□□□ 1.52
SSBP4-203ENST00000593641 ACOT2P49753 483 aa24.52■■□□□ 1.52
SSBP4-203ENST00000593641 FCHO2Q0JRZ9 810 aa24.52■■□□□ 1.52
SSBP4-203ENST00000593641 LRRC32Q14392 662 aa24.52■■□□□ 1.52
SSBP4-203ENST00000593641 VEPH1Q14D04 833 aa24.52■■□□□ 1.52
SSBP4-203ENST00000593641 RSPO4Q2I0M5 234 aaPredicted RBP24.52■■□□□ 1.52
SSBP4-203ENST00000593641 STXBP5Q5T5C0 1151 aa24.52■■□□□ 1.52
SSBP4-203ENST00000593641 SLFN12LQ6IEE8 588 aa24.52■■□□□ 1.52
SSBP4-203ENST00000593641 METTL23Q86XA0 190 aa24.52■■□□□ 1.52
SSBP4-203ENST00000593641 TTC9BQ8N6N2 239 aa24.52■■□□□ 1.52
SSBP4-203ENST00000593641 RSPRY1Q96DX4 576 aa24.52■■□□□ 1.52
SSBP4-203ENST00000593641 FIZ1Q96SL8 496 aa24.52■■□□□ 1.52
SSBP4-203ENST00000593641 C8orf33Q9H7E9 229 aaPredicted RBP24.52■■□□□ 1.52
SSBP4-203ENST00000593641 RAB23Q9ULC3 237 aa24.52■■□□□ 1.52
SSBP4-203ENST00000593641 C2CD2Q9Y426 696 aa24.52■■□□□ 1.52
SSBP4-203ENST00000593641 SLC38A8A6NNN8 435 aa24.51■■□□□ 1.51
SSBP4-203ENST00000593641 SOAT2O75908 522 aa24.51■■□□□ 1.51
SSBP4-203ENST00000593641 CYP11A1P05108 521 aa24.51■■□□□ 1.51
SSBP4-203ENST00000593641 CHRNB1P11230 501 aa24.51■■□□□ 1.51
SSBP4-203ENST00000593641 SDHBP21912 280 aa24.51■■□□□ 1.51
SSBP4-203ENST00000593641 TUFMP49411 452 aaKnown RBP24.51■■□□□ 1.51
SSBP4-203ENST00000593641 GRIN1Q05586 938 aa24.51■■□□□ 1.51
SSBP4-203ENST00000593641 SF3A1Q15459 793 aaKnown RBP24.51■■□□□ 1.51
SSBP4-203ENST00000593641 MGAT5BQ3V5L5 792 aa24.51■■□□□ 1.51
SSBP4-203ENST00000593641 SLC39A12Q504Y0 691 aa24.51■■□□□ 1.51
SSBP4-203ENST00000593641 GPR158Q5T848 1215 aa24.51■■□□□ 1.51
SSBP4-203ENST00000593641 GAREM2Q75VX8 874 aa24.51■■□□□ 1.51
SSBP4-203ENST00000593641 KRI1Q8N9T8 703 aaKnown RBP24.51■■□□□ 1.51
SSBP4-203ENST00000593641 OR10T2Q8NGX3 314 aa24.51■■□□□ 1.51
SSBP4-203ENST00000593641 GCNAQ96QF7 691 aa24.51■■□□□ 1.51
SSBP4-203ENST00000593641 RALGAPA1Q6GYQ0 2036 aa24.51■■□□□ 1.51
SSBP4-203ENST00000593641 KIF26AQ9ULI4 1882 aaPredicted RBP24.5■■□□□ 1.51
SSBP4-203ENST00000593641 MED19A0JLT2 244 aaPredicted RBP24.5■■□□□ 1.51
SSBP4-203ENST00000593641 ANO9A1A5B4 782 aa24.5■■□□□ 1.51
SSBP4-203ENST00000593641 TDGF1P13385 188 aa24.5■■□□□ 1.51
SSBP4-203ENST00000593641 CXCL12P48061 93 aa24.5■■□□□ 1.51
SSBP4-203ENST00000593641 TAF6P49848 677 aa24.5■■□□□ 1.51
SSBP4-203ENST00000593641 ZC2HC1CQ53FD0 456 aaPredicted RBP24.5■■□□□ 1.51
SSBP4-203ENST00000593641 THEM5Q8N1Q8 247 aa24.5■■□□□ 1.51
SSBP4-203ENST00000593641 PYM1Q9BRP8 204 aaKnown RBP24.5■■□□□ 1.51
SSBP4-203ENST00000593641 ST6GALNAC4Q9H4F1 302 aa24.5■■□□□ 1.51
SSBP4-203ENST00000593641 AGO2Q9UKV8 859 aaKnown RBP24.5■■□□□ 1.51
SSBP4-203ENST00000593641 USP18Q9UMW8 372 aa24.5■■□□□ 1.51
SSBP4-203ENST00000593641 DENND4CQ5VZ89 1909 aa24.49■■□□□ 1.51
SSBP4-203ENST00000593641 ANKRD63C9JTQ0 380 aa24.49■■□□□ 1.51
SSBP4-203ENST00000593641 CYB561D2O14569 222 aa24.49■■□□□ 1.51
SSBP4-203ENST00000593641 LMNB2Q03252 620 aa24.49■■□□□ 1.51
SSBP4-203ENST00000593641 TAF12Q16514 161 aa24.49■■□□□ 1.51
SSBP4-203ENST00000593641 ARHGAP29Q52LW3 1261 aa24.49■■□□□ 1.51
SSBP4-203ENST00000593641 GPIHBP1Q8IV16 184 aa24.49■■□□□ 1.51
SSBP4-203ENST00000593641 LPIN3Q9BQK8 851 aa24.49■■□□□ 1.51
SSBP4-203ENST00000593641 CCSER1Q9C0I3 900 aa24.49■■□□□ 1.51
SSBP4-203ENST00000593641 ZCWPW1Q9H0M4 648 aa24.49■■□□□ 1.51
SSBP4-203ENST00000593641 DPP3Q9NY33 737 aa24.49■■□□□ 1.51
SSBP4-203ENST00000593641 OBP2AQ9NY56 170 aa24.49■■□□□ 1.51
SSBP4-203ENST00000593641 TISP43B9A030 160 aa24.48■■□□□ 1.51
SSBP4-203ENST00000593641 CDC25CP30307 473 aa24.48■■□□□ 1.51
SSBP4-203ENST00000593641 DDIT3P35638 169 aa24.48■■□□□ 1.51
SSBP4-203ENST00000593641 SOX9P48436 509 aa24.48■■□□□ 1.51
SSBP4-203ENST00000593641 SATB1Q01826 763 aa24.48■■□□□ 1.51
SSBP4-203ENST00000593641 POU5F1Q01860 360 aaKnown RBP24.48■■□□□ 1.51
SSBP4-203ENST00000593641 SMARCB1Q12824 385 aa24.48■■□□□ 1.51
SSBP4-203ENST00000593641 RALGPS2Q86X27 583 aaPredicted RBP24.48■■□□□ 1.51
SSBP4-203ENST00000593641 SPEM1Q8N4L4 309 aa24.48■■□□□ 1.51
SSBP4-203ENST00000593641 CELF5Q8N6W0 485 aaKnown RBP24.48■■□□□ 1.51
SSBP4-203ENST00000593641 C2orf15Q8WU43 125 aaKnown RBP24.48■■□□□ 1.51
SSBP4-203ENST00000593641 POMGNT1Q8WZA1 660 aa24.48■■□□□ 1.51
SSBP4-203ENST00000593641 HVCN1Q96D96 273 aa24.48■■□□□ 1.51
SSBP4-203ENST00000593641 MKNK1Q9BUB5 465 aa24.48■■□□□ 1.51
SSBP4-203ENST00000593641 TASP1Q9H6P5 420 aa24.48■■□□□ 1.51
SSBP4-203ENST00000593641 STYXL1Q9Y6J8 313 aa24.48■■□□□ 1.51
SSBP4-203ENST00000593641 PRR5-ARHGAP8B1AHC4 643 aa24.47■■□□□ 1.51
SSBP4-203ENST00000593641 SPECC1L-ADORA2AF8WAN1 911 aa24.47■■□□□ 1.51
SSBP4-203ENST00000593641 CTHP32929 405 aa24.47■■□□□ 1.51
SSBP4-203ENST00000593641 ARHGAP8P85298 464 aa24.47■■□□□ 1.51
SSBP4-203ENST00000593641 SPPL2BQ8TCT7 592 aa24.47■■□□□ 1.51
SSBP4-203ENST00000593641 BPIFB1Q8TDL5 484 aa24.47■■□□□ 1.51
SSBP4-203ENST00000593641 CCDC39Q9UFE4 941 aa24.47■■□□□ 1.51
SSBP4-203ENST00000593641 CDV3Q9UKY7 258 aaKnown RBP24.47■■□□□ 1.51
SSBP4-203ENST00000593641 MYBPHLA2RUH7 354 aa24.46■■□□□ 1.51
SSBP4-203ENST00000593641 VPS37CA5D8V6 355 aaPredicted RBP24.46■■□□□ 1.51
SSBP4-203ENST00000593641 ATF6P18850 670 aa24.46■■□□□ 1.51
SSBP4-203ENST00000593641 CYP4F8P98187 520 aa24.46■■□□□ 1.51
SSBP4-203ENST00000593641 PLCB2Q00722 1185 aa24.46■■□□□ 1.51
SSBP4-203ENST00000593641 GAS6Q14393 721 aa24.46■■□□□ 1.51
SSBP4-203ENST00000593641 POSTNQ15063 836 aa24.46■■□□□ 1.51
SSBP4-203ENST00000593641 SV2CQ496J9 727 aa24.46■■□□□ 1.51
SSBP4-203ENST00000593641 DGKKQ5KSL6 1271 aa24.46■■□□□ 1.51
SSBP4-203ENST00000593641 LAIR1Q6GTX8 287 aa24.46■■□□□ 1.51
SSBP4-203ENST00000593641 PRR23BQ6ZRT6 265 aa24.46■■□□□ 1.51
SSBP4-203ENST00000593641 DYMQ7RTS9 669 aa24.46■■□□□ 1.51
SSBP4-203ENST00000593641 SFR1Q86XK3 245 aa24.46■■□□□ 1.51
SSBP4-203ENST00000593641 TTC8Q8TAM2 541 aa24.46■■□□□ 1.51
SSBP4-203ENST00000593641 ZFYVE19Q96K21 471 aa24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms