RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 ARID3BQ8IVW6 561 aaPredicted RBP25.89■■□□□ 1.74
LSM4-202ENST00000593564 KRI1Q8N9T8 703 aaKnown RBP25.89■■□□□ 1.74
LSM4-202ENST00000593564 CSGALNACT1Q8TDX6 532 aa25.89■■□□□ 1.74
LSM4-202ENST00000593564 LMAN1LQ9HAT1 526 aa25.89■■□□□ 1.74
LSM4-202ENST00000593564 AGO2Q9UKV8 859 aaKnown RBP25.89■■□□□ 1.74
LSM4-202ENST00000593564 SMG5Q9UPR3 1016 aaKnown RBP25.89■■□□□ 1.74
LSM4-202ENST00000593564 SOAT2O75908 522 aa25.88■■□□□ 1.73
LSM4-202ENST00000593564 PUM1Q14671 1186 aaKnown RBP eCLIP25.88■■□□□ 1.737e-8■□□□□ 9.8
LSM4-202ENST00000593564 C1orf228Q6PIY5 440 aa25.88■■□□□ 1.73
LSM4-202ENST00000593564 MKNK1Q9BUB5 465 aa25.88■■□□□ 1.73
LSM4-202ENST00000593564 ZCWPW1Q9H0M4 648 aa25.88■■□□□ 1.73
LSM4-202ENST00000593564 TSC2P49815 1807 aa25.87■■□□□ 1.73
LSM4-202ENST00000593564 CHRNB1P11230 501 aa25.87■■□□□ 1.73
LSM4-202ENST00000593564 CCNE1P24864 410 aa25.87■■□□□ 1.73
LSM4-202ENST00000593564 TUFMP49411 452 aaKnown RBP25.87■■□□□ 1.73
LSM4-202ENST00000593564 CCR3P51677 355 aa25.87■■□□□ 1.73
LSM4-202ENST00000593564 NRLP54845 237 aa25.87■■□□□ 1.73
LSM4-202ENST00000593564 PPP2R5DQ14738 602 aa25.87■■□□□ 1.73
LSM4-202ENST00000593564 SLC39A12Q504Y0 691 aa25.87■■□□□ 1.73
LSM4-202ENST00000593564 ZNF720Q7Z2F6 126 aa25.87■■□□□ 1.73
LSM4-202ENST00000593564 DGLUCYQ7Z3D6 616 aa25.87■■□□□ 1.73
LSM4-202ENST00000593564 GPR161Q8N6U8 529 aaKnown RBP25.87■■□□□ 1.73
LSM4-202ENST00000593564 SECISBP2LQ93073 1101 aaKnown RBP25.87■■□□□ 1.73
LSM4-202ENST00000593564 HVCN1Q96D96 273 aa25.87■■□□□ 1.73
LSM4-202ENST00000593564 EPSTI1Q96J88 318 aa25.87■■□□□ 1.73
LSM4-202ENST00000593564 ATXN3LQ9H3M9 355 aa25.87■■□□□ 1.73
LSM4-202ENST00000593564 OBP2AQ9NY56 170 aa25.87■■□□□ 1.73
LSM4-202ENST00000593564 DLL3Q9NYJ7 618 aa25.87■■□□□ 1.73
LSM4-202ENST00000593564 CYB561D2O14569 222 aa25.86■■□□□ 1.73
LSM4-202ENST00000593564 CENPBP07199 599 aaPredicted RBP25.86■■□□□ 1.73
LSM4-202ENST00000593564 GABRR2P28476 465 aa25.86■■□□□ 1.73
LSM4-202ENST00000593564 TAF6P49848 677 aa25.86■■□□□ 1.73
LSM4-202ENST00000593564 ARHGAP15Q53QZ3 475 aa25.86■■□□□ 1.73
LSM4-202ENST00000593564 USP49Q70CQ1 688 aa25.86■■□□□ 1.73
LSM4-202ENST00000593564 METTL23Q86XA0 190 aa25.86■■□□□ 1.73
LSM4-202ENST00000593564 SFR1Q86XK3 245 aa25.86■■□□□ 1.73
LSM4-202ENST00000593564 SEPT5Q99719 369 aaPredicted RBP25.86■■□□□ 1.73
LSM4-202ENST00000593564 C8orf33Q9H7E9 229 aaPredicted RBP25.86■■□□□ 1.73
LSM4-202ENST00000593564 DPP3Q9NY33 737 aa25.86■■□□□ 1.73
LSM4-202ENST00000593564 STK17AQ9UEE5 414 aa25.86■■□□□ 1.73
LSM4-202ENST00000593564 PPP1R37O75864 691 aa25.85■■□□□ 1.73
LSM4-202ENST00000593564 WEE1P30291 646 aa25.85■■□□□ 1.73
LSM4-202ENST00000593564 PTPAQ15257 358 aa25.85■■□□□ 1.73
LSM4-202ENST00000593564 GPR158Q5T848 1215 aa25.85■■□□□ 1.73
LSM4-202ENST00000593564 CRELD2Q6UXH1 353 aaPredicted RBP25.85■■□□□ 1.73
LSM4-202ENST00000593564 DYMQ7RTS9 669 aa25.85■■□□□ 1.73
LSM4-202ENST00000593564 C2orf15Q8WU43 125 aaKnown RBP25.85■■□□□ 1.73
LSM4-202ENST00000593564 LRRC3BQ96PB8 259 aa25.85■■□□□ 1.73
LSM4-202ENST00000593564 LPIN3Q9BQK8 851 aa25.85■■□□□ 1.73
LSM4-202ENST00000593564 PYM1Q9BRP8 204 aaKnown RBP25.85■■□□□ 1.73
LSM4-202ENST00000593564 STRA6Q9BX79 667 aa25.85■■□□□ 1.73
LSM4-202ENST00000593564 SEL1LQ9UBV2 794 aa25.85■■□□□ 1.73
LSM4-202ENST00000593564 CCDC39Q9UFE4 941 aa25.85■■□□□ 1.73
LSM4-202ENST00000593564 CLIC4Q9Y696 253 aa25.85■■□□□ 1.73
LSM4-202ENST00000593564 VPS37CA5D8V6 355 aaPredicted RBP25.84■■□□□ 1.73
LSM4-202ENST00000593564 SLC38A8A6NNN8 435 aa25.84■■□□□ 1.73
LSM4-202ENST00000593564 DPYSL4O14531 572 aa25.84■■□□□ 1.73
LSM4-202ENST00000593564 ATF6P18850 670 aa25.84■■□□□ 1.73
LSM4-202ENST00000593564 ADSSP30520 456 aa25.84■■□□□ 1.73
LSM4-202ENST00000593564 SCN1AP35498 2009 aa25.84■■□□□ 1.73
LSM4-202ENST00000593564 KPNA1P52294 538 aaPredicted RBP25.84■■□□□ 1.73
LSM4-202ENST00000593564 SMARCB1Q12824 385 aa25.84■■□□□ 1.73
LSM4-202ENST00000593564 CUL4AQ13619 759 aa25.84■■□□□ 1.73
LSM4-202ENST00000593564 VEPH1Q14D04 833 aa25.84■■□□□ 1.73
LSM4-202ENST00000593564 POSTNQ15063 836 aa25.84■■□□□ 1.73
LSM4-202ENST00000593564 MGAT5BQ3V5L5 792 aa25.84■■□□□ 1.73
LSM4-202ENST00000593564 EFCAB13Q8IY85 973 aa25.84■■□□□ 1.73
LSM4-202ENST00000593564 THEM5Q8N1Q8 247 aa25.84■■□□□ 1.73
LSM4-202ENST00000593564 POMGNT1Q8WZA1 660 aa25.84■■□□□ 1.73
LSM4-202ENST00000593564 IKZF4Q9H2S9 585 aa25.84■■□□□ 1.73
LSM4-202ENST00000593564 TASP1Q9H6P5 420 aa25.84■■□□□ 1.73
LSM4-202ENST00000593564 ANK1P16157 1881 aa25.83■■□□□ 1.73
LSM4-202ENST00000593564 IL18RAPO95256 599 aa25.83■■□□□ 1.73
LSM4-202ENST00000593564 CDC25CP30307 473 aa25.83■■□□□ 1.73
LSM4-202ENST00000593564 LRRC32Q14392 662 aa25.83■■□□□ 1.73
LSM4-202ENST00000593564 GAS6Q14393 721 aa25.83■■□□□ 1.73
LSM4-202ENST00000593564 ARHGAP29Q52LW3 1261 aa25.83■■□□□ 1.73
LSM4-202ENST00000593564 WSCD1Q658N2 575 aa25.83■■□□□ 1.73
LSM4-202ENST00000593564 NT5DC4Q86YG4 428 aa25.83■■□□□ 1.73
LSM4-202ENST00000593564 GPIHBP1Q8IV16 184 aa25.83■■□□□ 1.73
LSM4-202ENST00000593564 FAM200AQ8TCP9 573 aa25.83■■□□□ 1.73
LSM4-202ENST00000593564 SPPL2BQ8TCT7 592 aa25.83■■□□□ 1.73
LSM4-202ENST00000593564 IL21Q9HBE4 155 aa25.83■■□□□ 1.73
LSM4-202ENST00000593564 FBXO2Q9UK22 296 aaPredicted RBP25.83■■□□□ 1.73
LSM4-202ENST00000593564 SRPRBQ9Y5M8 271 aaKnown RBP25.83■■□□□ 1.73
LSM4-202ENST00000593564 MYBPHLA2RUH7 354 aa25.82■■□□□ 1.72
LSM4-202ENST00000593564 GAP43P17677 238 aa25.82■■□□□ 1.72
LSM4-202ENST00000593564 PDCP20941 246 aa25.82■■□□□ 1.72
LSM4-202ENST00000593564 CXCL12P48061 93 aa25.82■■□□□ 1.72
LSM4-202ENST00000593564 SOX9P48436 509 aa25.82■■□□□ 1.72
LSM4-202ENST00000593564 LRRTM3Q86VH5 581 aa25.82■■□□□ 1.72
LSM4-202ENST00000593564 RALGPS2Q86X27 583 aaPredicted RBP25.82■■□□□ 1.72
LSM4-202ENST00000593564 SPEM1Q8N4L4 309 aa25.82■■□□□ 1.72
LSM4-202ENST00000593564 MRPL44Q9H9J2 332 aaKnown RBP25.82■■□□□ 1.72
LSM4-202ENST00000593564 EXOC7Q9UPT5 735 aa25.82■■□□□ 1.72
LSM4-202ENST00000593564 MYMKA6NI61 221 aa25.81■■□□□ 1.72
LSM4-202ENST00000593564 KPNA7A9QM74 516 aa25.81■■□□□ 1.72
LSM4-202ENST00000593564 SPECC1L-ADORA2AF8WAN1 911 aa25.81■■□□□ 1.72
LSM4-202ENST00000593564 PRAMEF12O95522 483 aa25.81■■□□□ 1.72
LSM4-202ENST00000593564 CTHP32929 405 aa25.81■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms