RNA–Protein interactions for RNA: ENST00000593280.2

NPC1-214, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 1 (best)

Gene NPC1, Length 1,607 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-214ENST00000593280 PEX5P50542 639 aa12.68□□□□□ -0.38
NPC1-214ENST00000593280 PTPN11Q06124 597 aaPredicted RBP12.68□□□□□ -0.38
NPC1-214ENST00000593280 MAMLD1Q13495 774 aa12.68□□□□□ -0.38
NPC1-214ENST00000593280 FAM47CQ5HY64 1035 aa12.68□□□□□ -0.38
NPC1-214ENST00000593280 DENND1BQ6P3S1 775 aa12.68□□□□□ -0.38
NPC1-214ENST00000593280 RSPH3Q86UC2 560 aa12.68□□□□□ -0.38
NPC1-214ENST00000593280 CPNE8Q86YQ8 564 aa12.68□□□□□ -0.38
NPC1-214ENST00000593280 IFT20Q8IY31 132 aa12.68□□□□□ -0.38
NPC1-214ENST00000593280 GSPT2Q8IYD1 628 aaKnown RBP12.68□□□□□ -0.38
NPC1-214ENST00000593280 SLC4A11Q8NBS3 891 aa12.68□□□□□ -0.38
NPC1-214ENST00000593280 WHAMMQ8TF30 809 aa12.68□□□□□ -0.38
NPC1-214ENST00000593280 TMEM176AQ96HP8 235 aa12.68□□□□□ -0.38
NPC1-214ENST00000593280 ZMAT2Q96NC0 199 aaKnown RBP12.68□□□□□ -0.38
NPC1-214ENST00000593280 TRIM7Q9C029 511 aa12.68□□□□□ -0.38
NPC1-214ENST00000593280 ELOVL4Q9GZR5 314 aa12.68□□□□□ -0.38
NPC1-214ENST00000593280 SLITRK6Q9H5Y7 841 aa12.68□□□□□ -0.38
NPC1-214ENST00000593280 TUBGCP4Q9UGJ1 667 aa12.68□□□□□ -0.38
NPC1-214ENST00000593280 HMGXB4Q9UGU5 601 aa12.68□□□□□ -0.38
NPC1-214ENST00000593280 TRPV2Q9Y5S1 764 aa12.68□□□□□ -0.38
NPC1-214ENST00000593280 ADAMTS4O75173 837 aa12.67□□□□□ -0.38
NPC1-214ENST00000593280 PROSCO94903 275 aa12.67□□□□□ -0.38
NPC1-214ENST00000593280 MYBL2P10244 700 aa12.67□□□□□ -0.38
NPC1-214ENST00000593280 ITGA4P13612 1032 aa12.67□□□□□ -0.38
NPC1-214ENST00000593280 PRKAR2AP13861 404 aaKnown RBP12.67□□□□□ -0.38
NPC1-214ENST00000593280 AKAP5P24588 427 aa12.67□□□□□ -0.38
NPC1-214ENST00000593280 RWDD2BP57060 319 aa12.67□□□□□ -0.38
NPC1-214ENST00000593280 GUCY2DQ02846 1103 aa12.67□□□□□ -0.38
NPC1-214ENST00000593280 INCA1Q0VD86 236 aa12.67□□□□□ -0.38
NPC1-214ENST00000593280 ORC1Q13415 861 aa12.67□□□□□ -0.38
NPC1-214ENST00000593280 PPP2R5EQ16537 467 aa12.67□□□□□ -0.38
NPC1-214ENST00000593280 DEFB115Q30KQ5 88 aa12.67□□□□□ -0.38
NPC1-214ENST00000593280 UBXN11Q5T124 520 aa12.67□□□□□ -0.38
NPC1-214ENST00000593280 GDF6Q6KF10 455 aaPredicted RBP12.67□□□□□ -0.38
NPC1-214ENST00000593280 DNAJC24Q6P3W2 148 aa12.67□□□□□ -0.38
NPC1-214ENST00000593280 ALKAL1Q6UXT8 129 aa12.67□□□□□ -0.38
NPC1-214ENST00000593280 FEZF2Q8TBJ5 459 aa12.67□□□□□ -0.38
NPC1-214ENST00000593280 TWNKQ96RR1 684 aa12.67□□□□□ -0.38
NPC1-214ENST00000593280 TSPAN18Q96SJ8 248 aa12.67□□□□□ -0.38
NPC1-214ENST00000593280 HINFPQ9BQA5 517 aa12.67□□□□□ -0.38
NPC1-214ENST00000593280 PLVAPQ9BX97 442 aa12.67□□□□□ -0.38
NPC1-214ENST00000593280 DDX47Q9H0S4 455 aaKnown RBP12.67□□□□□ -0.38
NPC1-214ENST00000593280 CXCL16Q9H2A7 254 aa12.67□□□□□ -0.38
NPC1-214ENST00000593280 LHX5Q9H2C1 402 aa12.67□□□□□ -0.38
NPC1-214ENST00000593280 PARP2Q9UGN5 583 aa12.67□□□□□ -0.38
NPC1-214ENST00000593280 STRIP2Q9ULQ0 834 aa12.67□□□□□ -0.38
NPC1-214ENST00000593280 BARX2Q9UMQ3 279 aaPredicted RBP12.67□□□□□ -0.38
NPC1-214ENST00000593280 UBQLN1Q9UMX0 589 aaKnown RBP12.67□□□□□ -0.38
NPC1-214ENST00000593280 CDY2AQ9Y6F7 541 aa12.67□□□□□ -0.38
NPC1-214ENST00000593280 MAP2K7O14733 419 aa12.66□□□□□ -0.38
NPC1-214ENST00000593280 SART1O43290 800 aaKnown RBP12.66□□□□□ -0.38
NPC1-214ENST00000593280 XPOTO43592 962 aaKnown RBP12.66□□□□□ -0.38
NPC1-214ENST00000593280 RPLP2P05387 115 aaKnown RBP12.66□□□□□ -0.38
NPC1-214ENST00000593280 GLI1P08151 1106 aa12.66□□□□□ -0.38
NPC1-214ENST00000593280 VDRP11473 427 aa12.66□□□□□ -0.38
NPC1-214ENST00000593280 ELNP15502 786 aa12.66□□□□□ -0.38
NPC1-214ENST00000593280 ATF7P17544 494 aaPredicted RBP12.66□□□□□ -0.38
NPC1-214ENST00000593280 CCND3P30281 292 aaPredicted RBP12.66□□□□□ -0.38
NPC1-214ENST00000593280 CASP8Q14790 479 aa12.66□□□□□ -0.38
NPC1-214ENST00000593280 ZBTB6Q15916 424 aa12.66□□□□□ -0.38
NPC1-214ENST00000593280 GLRA4Q5JXX5 417 aa12.66□□□□□ -0.38
NPC1-214ENST00000593280 TWF2Q6IBS0 349 aaKnown RBP12.66□□□□□ -0.38
NPC1-214ENST00000593280 FAM228AQ86W67 206 aa12.66□□□□□ -0.38
NPC1-214ENST00000593280 ERICH1Q86X53 443 aa12.66□□□□□ -0.38
NPC1-214ENST00000593280 LRRC52Q8N7C0 313 aa12.66□□□□□ -0.38
NPC1-214ENST00000593280 CCDC26Q8TAB7 109 aa12.66□□□□□ -0.38
NPC1-214ENST00000593280 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.66□□□□□ -0.38
NPC1-214ENST00000593280 AENQ8WTP8 325 aaKnown RBP12.66□□□□□ -0.38
NPC1-214ENST00000593280 C18orf25Q96B23 403 aaPredicted RBP12.66□□□□□ -0.38
NPC1-214ENST00000593280 GDF3Q9NR23 364 aa12.66□□□□□ -0.38
NPC1-214ENST00000593280 LCMT1Q9UIC8 334 aa12.66□□□□□ -0.38
NPC1-214ENST00000593280 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.66□□□□□ -0.38
NPC1-214ENST00000593280 IPPQ9Y573 584 aa12.66□□□□□ -0.38
NPC1-214ENST00000593280 SCN1AP35498 2009 aa12.66□□□□□ -0.38
NPC1-214ENST00000593280 CD4P01730 458 aa12.66□□□□□ -0.38
NPC1-214ENST00000593280 MYCNP04198 464 aaPredicted RBP12.66□□□□□ -0.38
NPC1-214ENST00000593280 ASGR1P07306 291 aa12.66□□□□□ -0.38
NPC1-214ENST00000593280 PYGMP11217 842 aa12.66□□□□□ -0.38
NPC1-214ENST00000593280 KCNE1P15382 129 aa12.66□□□□□ -0.38
NPC1-214ENST00000593280 MAN1A1P33908 653 aa12.66□□□□□ -0.38
NPC1-214ENST00000593280 NDST1P52848 882 aa12.66□□□□□ -0.38
NPC1-214ENST00000593280 EPHB4P54760 987 aa12.66□□□□□ -0.38
NPC1-214ENST00000593280 CAP1Q01518 475 aa12.66□□□□□ -0.38
NPC1-214ENST00000593280 TAP1Q03518 808 aa12.66□□□□□ -0.38
NPC1-214ENST00000593280 PAK2Q13177 524 aa12.66□□□□□ -0.38
NPC1-214ENST00000593280 SGO2Q562F6 1265 aa12.66□□□□□ -0.38
NPC1-214ENST00000593280 AADACL2Q6P093 401 aa12.66□□□□□ -0.38
NPC1-214ENST00000593280 ADAT2Q7Z6V5 191 aaKnown RBP12.66□□□□□ -0.38
NPC1-214ENST00000593280 WDTC1Q8N5D0 677 aa12.66□□□□□ -0.38
NPC1-214ENST00000593280 HEXIM2Q96MH2 286 aaKnown RBP12.66□□□□□ -0.38
NPC1-214ENST00000593280 ZNF560Q96MR9 790 aa12.66□□□□□ -0.38
NPC1-214ENST00000593280 ACBD3Q9H3P7 528 aa12.66□□□□□ -0.38
NPC1-214ENST00000593280 EPB41L5Q9HCM4 733 aa12.66□□□□□ -0.38
NPC1-214ENST00000593280 RNF186Q9NXI6 227 aa12.66□□□□□ -0.38
NPC1-214ENST00000593280 KLK14Q9P0G3 267 aa12.66□□□□□ -0.38
NPC1-214ENST00000593280 IP6K2Q9UHH9 426 aa12.66□□□□□ -0.38
NPC1-214ENST00000593280 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.66□□□□□ -0.38
NPC1-214ENST00000593280 SMIM28A0A1B0GU29 152 aa12.65□□□□□ -0.38
NPC1-214ENST00000593280 ZSCAN5CA6NGD5 496 aaPredicted RBP12.65□□□□□ -0.38
NPC1-214ENST00000593280 M0QYV0 167 aa12.65□□□□□ -0.38
NPC1-214ENST00000593280 PPEF2O14830 753 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms