RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 DDX23Q9BUQ8 820 aaKnown RBP17.55■□□□□ 0.4
PRKCSH-217ENST00000592741 TCRBV5S1A1TA0A578 114 aa17.54■□□□□ 0.4
PRKCSH-217ENST00000592741 C5orf60A6NFR6 353 aa17.54■□□□□ 0.4
PRKCSH-217ENST00000592741 WEE2P0C1S8 567 aa17.54■□□□□ 0.4
PRKCSH-217ENST00000592741 EIF4BP23588 611 aaKnown RBP17.54■□□□□ 0.4
PRKCSH-217ENST00000592741 CDH5P33151 784 aaPredicted RBP17.54■□□□□ 0.4
PRKCSH-217ENST00000592741 ASPAP45381 313 aa17.54■□□□□ 0.4
PRKCSH-217ENST00000592741 VPS41P49754 854 aa17.54■□□□□ 0.4
PRKCSH-217ENST00000592741 TTLL12Q14166 644 aaPredicted RBP17.54■□□□□ 0.4
PRKCSH-217ENST00000592741 TNFAIP8L3Q5GJ75 292 aa17.54■□□□□ 0.4
PRKCSH-217ENST00000592741 WDR78Q5VTH9 848 aa17.54■□□□□ 0.4
PRKCSH-217ENST00000592741 CCDC62Q6P9F0 684 aa17.54■□□□□ 0.4
PRKCSH-217ENST00000592741 ERICH1Q86X53 443 aa17.54■□□□□ 0.4
PRKCSH-217ENST00000592741 SLITRK1Q96PX8 696 aa17.54■□□□□ 0.4
PRKCSH-217ENST00000592741 KLHL11Q9NVR0 708 aa17.54■□□□□ 0.4
PRKCSH-217ENST00000592741 ASAP2O43150 1006 aa17.54■□□□□ 0.4
PRKCSH-217ENST00000592741 TJP3O95049 919 aa17.54■□□□□ 0.4
PRKCSH-217ENST00000592741 IL18RAPO95256 599 aa17.54■□□□□ 0.4
PRKCSH-217ENST00000592741 TXNP10599 105 aaKnown RBP17.54■□□□□ 0.4
PRKCSH-217ENST00000592741 OSTNP61366 133 aa17.54■□□□□ 0.4
PRKCSH-217ENST00000592741 PIGHQ14442 188 aaPredicted RBP17.54■□□□□ 0.4
PRKCSH-217ENST00000592741 Q3C1V9 767 aa17.54■□□□□ 0.4
PRKCSH-217ENST00000592741 EFCAB12Q6NXP0 572 aa17.54■□□□□ 0.4
PRKCSH-217ENST00000592741 GSTA5Q7RTV2 222 aa17.54■□□□□ 0.4
PRKCSH-217ENST00000592741 COPS5Q92905 334 aa17.54■□□□□ 0.4
PRKCSH-217ENST00000592741 SERPINB12Q96P63 405 aa17.54■□□□□ 0.4
PRKCSH-217ENST00000592741 FAM118BQ9BPY3 351 aa17.54■□□□□ 0.4
PRKCSH-217ENST00000592741 XYLT2Q9H1B5 865 aa17.54■□□□□ 0.4
PRKCSH-217ENST00000592741 ADAM7Q9H2U9 754 aa17.54■□□□□ 0.4
PRKCSH-217ENST00000592741 MROH8Q9H579 483 aa17.54■□□□□ 0.4
PRKCSH-217ENST00000592741 RPF1Q9H9Y2 349 aaKnown RBP17.54■□□□□ 0.4
PRKCSH-217ENST00000592741 SBF1O95248 1867 aa17.54■□□□□ 0.4
PRKCSH-217ENST00000592741 PI4K2BG5E9Z4 385 aa17.53■□□□□ 0.4
PRKCSH-217ENST00000592741 B4GALT5O43286 388 aa17.53■□□□□ 0.4
PRKCSH-217ENST00000592741 TTC4O95801 387 aa17.53■□□□□ 0.4
PRKCSH-217ENST00000592741 CPP00450 1065 aa17.53■□□□□ 0.4
PRKCSH-217ENST00000592741 ATP5DP30049 168 aa17.53■□□□□ 0.4
PRKCSH-217ENST00000592741 LIG3P49916 1009 aa17.53■□□□□ 0.4
PRKCSH-217ENST00000592741 CLCN3P51790 818 aa17.53■□□□□ 0.4
PRKCSH-217ENST00000592741 COPS2P61201 443 aa17.53■□□□□ 0.4
PRKCSH-217ENST00000592741 MBTD1Q05BQ5 628 aa17.53■□□□□ 0.4
PRKCSH-217ENST00000592741 ZNF252P-AS1Q0IIN9 211 aa17.53■□□□□ 0.4
PRKCSH-217ENST00000592741 TTLL4Q14679 1199 aa17.53■□□□□ 0.4
PRKCSH-217ENST00000592741 IZUMO3Q5VZ72 239 aa17.53■□□□□ 0.4
PRKCSH-217ENST00000592741 EEF1DP3Q658K8 133 aa17.53■□□□□ 0.4
PRKCSH-217ENST00000592741 KAZNQ674X7 775 aa17.53■□□□□ 0.4
PRKCSH-217ENST00000592741 FASTKD5Q7L8L6 764 aaKnown RBP17.53■□□□□ 0.4
PRKCSH-217ENST00000592741 ANKS1BQ7Z6G8 1248 aa17.53■□□□□ 0.4
PRKCSH-217ENST00000592741 MICALL1Q8N3F8 863 aa17.53■□□□□ 0.4
PRKCSH-217ENST00000592741 CCHCR1Q8TD31 782 aa17.53■□□□□ 0.4
PRKCSH-217ENST00000592741 CHMP6Q96FZ7 201 aa17.53■□□□□ 0.4
PRKCSH-217ENST00000592741 ZNF668Q96K58 619 aaPredicted RBP17.53■□□□□ 0.4
PRKCSH-217ENST00000592741 DDX56Q9NY93 547 aaKnown RBP17.53■□□□□ 0.4
PRKCSH-217ENST00000592741 DDX20Q9UHI6 824 aaKnown RBP17.53■□□□□ 0.4
PRKCSH-217ENST00000592741 STRIP2Q9ULQ0 834 aa17.53■□□□□ 0.4
PRKCSH-217ENST00000592741 TNFSF13BQ9Y275 285 aa17.53■□□□□ 0.4
PRKCSH-217ENST00000592741 LOC102724159A0A0B4J2E5 919 aa17.53■□□□□ 0.4
PRKCSH-217ENST00000592741 MED7O43513 233 aa17.53■□□□□ 0.4
PRKCSH-217ENST00000592741 GJB1P08034 283 aa17.53■□□□□ 0.4
PRKCSH-217ENST00000592741 ATF7P17544 494 aaPredicted RBP17.53■□□□□ 0.4
PRKCSH-217ENST00000592741 LACTBP83111 547 aaPredicted RBP17.53■□□□□ 0.4
PRKCSH-217ENST00000592741 PWP2Q15269 919 aaKnown RBP17.53■□□□□ 0.4
PRKCSH-217ENST00000592741 QPCTQ16769 361 aa17.53■□□□□ 0.4
PRKCSH-217ENST00000592741 LONRF1Q17RB8 773 aa17.53■□□□□ 0.4
PRKCSH-217ENST00000592741 PPP1R15BQ5SWA1 713 aa17.53■□□□□ 0.4
PRKCSH-217ENST00000592741 CEP128Q6ZU80 1094 aa17.53■□□□□ 0.4
PRKCSH-217ENST00000592741 CPLX4Q7Z7G2 160 aa17.53■□□□□ 0.4
PRKCSH-217ENST00000592741 ATXN2LQ8WWM7 1075 aaKnown RBP17.53■□□□□ 0.4
PRKCSH-217ENST00000592741 TFAP2BQ92481 460 aa17.53■□□□□ 0.4
PRKCSH-217ENST00000592741 CDT1Q9H211 546 aa17.53■□□□□ 0.4
PRKCSH-217ENST00000592741 F8VP50 259 aa17.52■□□□□ 0.4
PRKCSH-217ENST00000592741 LIASO43766 372 aa17.52■□□□□ 0.4
PRKCSH-217ENST00000592741 TCF4P15884 667 aa17.52■□□□□ 0.4
PRKCSH-217ENST00000592741 DRD4P21917 467 aa17.52■□□□□ 0.4
PRKCSH-217ENST00000592741 POLR2BP30876 1174 aaKnown RBP17.52■□□□□ 0.4
PRKCSH-217ENST00000592741 PTPN7P35236 360 aa17.52■□□□□ 0.4
PRKCSH-217ENST00000592741 SLC20A2Q08357 652 aa17.52■□□□□ 0.4
PRKCSH-217ENST00000592741 IFT88Q13099 833 aa17.52■□□□□ 0.4
PRKCSH-217ENST00000592741 TTC31Q49AM3 519 aaPredicted RBP17.52■□□□□ 0.4
PRKCSH-217ENST00000592741 ATP13A4Q4VNC1 1196 aa17.52■□□□□ 0.4
PRKCSH-217ENST00000592741 MFSD7Q6UXD7 560 aa17.52■□□□□ 0.4
PRKCSH-217ENST00000592741 SPOCD1Q6ZMY3 1216 aa17.52■□□□□ 0.4
PRKCSH-217ENST00000592741 MOB2Q70IA6 237 aa17.52■□□□□ 0.4
PRKCSH-217ENST00000592741 CACNA2D3Q8IZS8 1091 aa17.52■□□□□ 0.4
PRKCSH-217ENST00000592741 WDTC1Q8N5D0 677 aa17.52■□□□□ 0.4
PRKCSH-217ENST00000592741 NIPA2Q8N8Q9 360 aa17.52■□□□□ 0.4
PRKCSH-217ENST00000592741 CEP120Q8N960 986 aa17.52■□□□□ 0.4
PRKCSH-217ENST00000592741 IPO4Q8TEX9 1081 aaKnown RBP17.52■□□□□ 0.4
PRKCSH-217ENST00000592741 CDCA5Q96FF9 252 aa17.52■□□□□ 0.4
PRKCSH-217ENST00000592741 INTS9Q9NV88 658 aaKnown RBP17.52■□□□□ 0.4
PRKCSH-217ENST00000592741 PRMT7Q9NVM4 692 aaPredicted RBP17.52■□□□□ 0.4
PRKCSH-217ENST00000592741 DNAJC17Q9NVM6 304 aaKnown RBP17.52■□□□□ 0.4
PRKCSH-217ENST00000592741 NXF1Q9UBU9 619 aaKnown RBP17.52■□□□□ 0.4
PRKCSH-217ENST00000592741 POLIQ9UNA4 740 aa17.52■□□□□ 0.4
PRKCSH-217ENST00000592741 IVNS1ABPQ9Y6Y0 642 aa17.52■□□□□ 0.4
PRKCSH-217ENST00000592741 ANK1P16157 1881 aa17.52■□□□□ 0.39
PRKCSH-217ENST00000592741 KRT19P08727 400 aa17.51■□□□□ 0.39
PRKCSH-217ENST00000592741 CXCL8P10145 99 aa17.51■□□□□ 0.39
PRKCSH-217ENST00000592741 KRT10P13645 584 aa17.51■□□□□ 0.39
PRKCSH-217ENST00000592741 CD19P15391 556 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms