RNA–Protein interactions for RNA: ENST00000592604.5

SMARCA4-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best)

Gene SMARCA4, Length 2,940 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-219ENST00000592604 HNRNPCL1O60812 293 aaKnown RBP15.68■□□□□ 0.1
SMARCA4-219ENST00000592604 HLA-DRAP01903 254 aa15.68■□□□□ 0.1
SMARCA4-219ENST00000592604 PTPN4P29074 926 aa15.68■□□□□ 0.1
SMARCA4-219ENST00000592604 INHBEP58166 350 aa15.68■□□□□ 0.1
SMARCA4-219ENST00000592604 EFHC2Q5JST6 749 aa15.68■□□□□ 0.1
SMARCA4-219ENST00000592604 HHATQ5VTY9 493 aa15.68■□□□□ 0.1
SMARCA4-219ENST00000592604 FAM84AQ96KN4 292 aa15.68■□□□□ 0.1
SMARCA4-219ENST00000592604 SENP7Q9BQF6 1050 aa15.68■□□□□ 0.1
SMARCA4-219ENST00000592604 TMOD2Q9NZR1 351 aa15.68■□□□□ 0.1
SMARCA4-219ENST00000592604 PSMC3IPQ9P2W1 217 aaPredicted RBP15.68■□□□□ 0.1
SMARCA4-219ENST00000592604 SHOC2Q9UQ13 582 aa15.68■□□□□ 0.1
SMARCA4-219ENST00000592604 A0A1W2PPM1 405 aa15.67■□□□□ 0.1
SMARCA4-219ENST00000592604 KIF3CO14782 793 aa15.67■□□□□ 0.1
SMARCA4-219ENST00000592604 FGFR1P11362 822 aa15.67■□□□□ 0.1
SMARCA4-219ENST00000592604 KRT10P13645 584 aa15.67■□□□□ 0.1
SMARCA4-219ENST00000592604 GJC1P36383 396 aa15.67■□□□□ 0.1
SMARCA4-219ENST00000592604 RAD23BP54727 409 aa15.67■□□□□ 0.1
SMARCA4-219ENST00000592604 IRX1P78414 480 aaPredicted RBP15.67■□□□□ 0.1
SMARCA4-219ENST00000592604 GPS1Q13098 491 aa15.67■□□□□ 0.1
SMARCA4-219ENST00000592604 PSMD6Q15008 389 aa15.67■□□□□ 0.1
SMARCA4-219ENST00000592604 OASLQ15646 514 aaKnown RBP15.67■□□□□ 0.1
SMARCA4-219ENST00000592604 ATP13A4Q4VNC1 1196 aa15.67■□□□□ 0.1
SMARCA4-219ENST00000592604 LRRC38Q5VT99 294 aa15.67■□□□□ 0.1
SMARCA4-219ENST00000592604 CCDC125Q86Z20 511 aa15.67■□□□□ 0.1
SMARCA4-219ENST00000592604 CFAP61Q8NHU2 1237 aa15.67■□□□□ 0.1
SMARCA4-219ENST00000592604 NUDCD1Q96RS6 583 aa15.67■□□□□ 0.1
SMARCA4-219ENST00000592604 MAK16Q9BXY0 300 aaKnown RBP15.67■□□□□ 0.1
SMARCA4-219ENST00000592604 VPS37BQ9H9H4 285 aa15.67■□□□□ 0.1
SMARCA4-219ENST00000592604 PARVAQ9NVD7 372 aa15.67■□□□□ 0.1
SMARCA4-219ENST00000592604 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.67■□□□□ 0.1
SMARCA4-219ENST00000592604 CNTN6Q9UQ52 1028 aa15.67■□□□□ 0.1
SMARCA4-219ENST00000592604 EXTL3O43909 919 aa15.67■□□□□ 0.1
SMARCA4-219ENST00000592604 ZWINTO95229 277 aa15.67■□□□□ 0.1
SMARCA4-219ENST00000592604 EPHB2P29323 1055 aa15.67■□□□□ 0.1
SMARCA4-219ENST00000592604 PTPN7P35236 360 aa15.67■□□□□ 0.1
SMARCA4-219ENST00000592604 MFSD7Q6UXD7 560 aa15.67■□□□□ 0.1
SMARCA4-219ENST00000592604 CENPUQ71F23 418 aa15.67■□□□□ 0.1
SMARCA4-219ENST00000592604 ARMC2Q8NEN0 867 aa15.67■□□□□ 0.1
SMARCA4-219ENST00000592604 RDM1Q8NG50 284 aa15.67■□□□□ 0.1
SMARCA4-219ENST00000592604 ASAP3Q8TDY4 903 aa15.67■□□□□ 0.1
SMARCA4-219ENST00000592604 ZMYND8Q9ULU4 1186 aaPredicted RBP15.67■□□□□ 0.1
SMARCA4-219ENST00000592604 ATP2A1O14983 1001 aa15.67■□□□□ 0.1
SMARCA4-219ENST00000592604 CBX6O95503 412 aa15.67■□□□□ 0.1
SMARCA4-219ENST00000592604 ETS1P14921 441 aa15.67■□□□□ 0.1
SMARCA4-219ENST00000592604 CCNHP51946 323 aaPredicted RBP15.67■□□□□ 0.1
SMARCA4-219ENST00000592604 RTP1P59025 263 aa15.67■□□□□ 0.1
SMARCA4-219ENST00000592604 PGM5Q15124 567 aa15.67■□□□□ 0.1
SMARCA4-219ENST00000592604 TDRD10Q5VZ19 366 aaKnown RBP15.67■□□□□ 0.1
SMARCA4-219ENST00000592604 LVRNQ6Q4G3 990 aa15.67■□□□□ 0.1
SMARCA4-219ENST00000592604 NLRP9Q7RTR0 991 aa15.67■□□□□ 0.1
SMARCA4-219ENST00000592604 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.67■□□□□ 0.1
SMARCA4-219ENST00000592604 ZBED8Q8IZ13 594 aa15.67■□□□□ 0.1
SMARCA4-219ENST00000592604 FBXO41Q8TF61 875 aa15.67■□□□□ 0.1
SMARCA4-219ENST00000592604 NKD2Q969F2 451 aaPredicted RBP15.67■□□□□ 0.1
SMARCA4-219ENST00000592604 TAAR1Q96RJ0 339 aa15.67■□□□□ 0.1
SMARCA4-219ENST00000592604 GLIS2Q9BZE0 524 aaPredicted RBP15.67■□□□□ 0.1
SMARCA4-219ENST00000592604 PDLIM7Q9NR12 457 aa15.67■□□□□ 0.1
SMARCA4-219ENST00000592604 ZFATQ9P243 1243 aa15.67■□□□□ 0.1
SMARCA4-219ENST00000592604 MYH9P35579 1960 aaKnown RBP15.66■□□□□ 0.1
SMARCA4-219ENST00000592604 PI4K2BG5E9Z4 385 aa15.66■□□□□ 0.1
SMARCA4-219ENST00000592604 TBC1D12O60347 775 aa15.66■□□□□ 0.1
SMARCA4-219ENST00000592604 ATP6V1C1P21283 382 aa15.66■□□□□ 0.1
SMARCA4-219ENST00000592604 RXRBP28702 533 aa15.66■□□□□ 0.1
SMARCA4-219ENST00000592604 GNA15P30679 374 aa15.66■□□□□ 0.1
SMARCA4-219ENST00000592604 VCPP55072 806 aaKnown RBP15.66■□□□□ 0.1
SMARCA4-219ENST00000592604 RNASELQ05823 741 aaKnown RBP15.66■□□□□ 0.1
SMARCA4-219ENST00000592604 CUL2Q13617 745 aa15.66■□□□□ 0.1
SMARCA4-219ENST00000592604 CTC1Q2NKJ3 1217 aa15.66■□□□□ 0.1
SMARCA4-219ENST00000592604 WDR72Q3MJ13 1102 aa15.66■□□□□ 0.1
SMARCA4-219ENST00000592604 TAF1BQ53T94 588 aaPredicted RBP15.66■□□□□ 0.1
SMARCA4-219ENST00000592604 KAZNQ674X7 775 aa15.66■□□□□ 0.1
SMARCA4-219ENST00000592604 ZNF449Q6P9G9 518 aa15.66■□□□□ 0.1
SMARCA4-219ENST00000592604 TAS1R3Q7RTX0 852 aa15.66■□□□□ 0.1
SMARCA4-219ENST00000592604 NLRX1Q86UT6 975 aa15.66■□□□□ 0.1
SMARCA4-219ENST00000592604 PASD1Q8IV76 773 aa15.66■□□□□ 0.1
SMARCA4-219ENST00000592604 ZNF276Q8N554 614 aa15.66■□□□□ 0.1
SMARCA4-219ENST00000592604 PHACTR1Q9C0D0 580 aa15.66■□□□□ 0.1
SMARCA4-219ENST00000592604 DENND2DQ9H6A0 471 aaPredicted RBP15.66■□□□□ 0.1
SMARCA4-219ENST00000592604 ZFP69BQ9UJL9 534 aa15.66■□□□□ 0.1
SMARCA4-219ENST00000592604 TMEM191CA6NGB0 347 aa15.66■□□□□ 0.1
SMARCA4-219ENST00000592604 VNN1O95497 513 aa15.66■□□□□ 0.1
SMARCA4-219ENST00000592604 ITGAVP06756 1048 aa15.66■□□□□ 0.1
SMARCA4-219ENST00000592604 TMEM191BP0C7N4 346 aa15.66■□□□□ 0.1
SMARCA4-219ENST00000592604 HP1BP3Q5SSJ5 553 aaPredicted RBP15.66■□□□□ 0.1
SMARCA4-219ENST00000592604 SPOPLQ6IQ16 392 aa15.66■□□□□ 0.1
SMARCA4-219ENST00000592604 SPOCD1Q6ZMY3 1216 aa15.66■□□□□ 0.1
SMARCA4-219ENST00000592604 PCDH9Q9HC56 1237 aa15.66■□□□□ 0.1
SMARCA4-219ENST00000592604 SLC24A3Q9HC58 644 aa15.66■□□□□ 0.1
SMARCA4-219ENST00000592604 KLHL11Q9NVR0 708 aa15.66■□□□□ 0.1
SMARCA4-219ENST00000592604 SPDYE2BA6NHP3 402 aa15.65■□□□□ 0.1
SMARCA4-219ENST00000592604 STBD1O95210 358 aa15.65■□□□□ 0.1
SMARCA4-219ENST00000592604 LMNAP02545 664 aaKnown RBP15.65■□□□□ 0.1
SMARCA4-219ENST00000592604 SPDYE6P0CI01 402 aa15.65■□□□□ 0.1
SMARCA4-219ENST00000592604 EIF2AK2P19525 551 aaKnown RBP15.65■□□□□ 0.1
SMARCA4-219ENST00000592604 GCKP35557 465 aa15.65■□□□□ 0.1
SMARCA4-219ENST00000592604 SOX10P56693 466 aa15.65■□□□□ 0.1
SMARCA4-219ENST00000592604 GEMIN4P57678 1058 aaKnown RBP15.65■□□□□ 0.1
SMARCA4-219ENST00000592604 GPX6P59796 221 aa15.65■□□□□ 0.1
SMARCA4-219ENST00000592604 PDIA2Q13087 525 aaKnown RBP15.65■□□□□ 0.1
SMARCA4-219ENST00000592604 LMBRD2Q68DH5 695 aaPredicted RBP15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms