RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 PDCL2Q8N4E4 241 aa29.31■■■□□ 2.28
SMAD4-213ENST00000591914 PBXIP1Q96AQ6 731 aa29.31■■■□□ 2.28
SMAD4-213ENST00000591914 FNBP1Q96RU3 617 aa29.31■■■□□ 2.28
SMAD4-213ENST00000591914 CGRRF1Q99675 332 aa29.31■■■□□ 2.28
SMAD4-213ENST00000591914 CEP72Q9P209 647 aa29.31■■■□□ 2.28
SMAD4-213ENST00000591914 HSFX1Q9UBD0 423 aa29.31■■■□□ 2.28
SMAD4-213ENST00000591914 L1RE1Q9UN81 338 aa29.31■■■□□ 2.28
SMAD4-213ENST00000591914 DUSP12Q9UNI6 340 aa29.31■■■□□ 2.28
SMAD4-213ENST00000591914 EXOC3O60645 756 aa29.3■■■□□ 2.28
SMAD4-213ENST00000591914 PRPF40AO75400 957 aaKnown RBP29.3■■■□□ 2.28
SMAD4-213ENST00000591914 DLATP10515 647 aaKnown RBP29.3■■■□□ 2.28
SMAD4-213ENST00000591914 KCNB1Q14721 858 aa29.3■■■□□ 2.28
SMAD4-213ENST00000591914 NPAS3Q8IXF0 933 aa29.3■■■□□ 2.28
SMAD4-213ENST00000591914 ELMOD1Q8N336 334 aa29.3■■■□□ 2.28
SMAD4-213ENST00000591914 ATAD1Q8NBU5 361 aa29.3■■■□□ 2.28
SMAD4-213ENST00000591914 CCDC127Q96BQ5 260 aa29.3■■■□□ 2.28
SMAD4-213ENST00000591914 CCDC34Q96HJ3 373 aa29.3■■■□□ 2.28
SMAD4-213ENST00000591914 CORO1BQ9BR76 489 aa29.3■■■□□ 2.28
SMAD4-213ENST00000591914 MRPS23Q9Y3D9 190 aaKnown RBP29.3■■■□□ 2.28
SMAD4-213ENST00000591914 HUS1O60921 280 aa29.29■■■□□ 2.28
SMAD4-213ENST00000591914 TNNI1P19237 187 aa29.29■■■□□ 2.28
SMAD4-213ENST00000591914 MYO1EQ12965 1108 aa29.29■■■□□ 2.28
SMAD4-213ENST00000591914 SNW1Q13573 536 aaKnown RBP29.29■■■□□ 2.28
SMAD4-213ENST00000591914 SLC39A12Q504Y0 691 aa29.29■■■□□ 2.28
SMAD4-213ENST00000591914 PRSS36Q5K4E3 855 aa29.29■■■□□ 2.28
SMAD4-213ENST00000591914 TRAPPC11Q7Z392 1133 aa29.29■■■□□ 2.28
SMAD4-213ENST00000591914 TMEM86AQ8N2M4 240 aa29.29■■■□□ 2.28
SMAD4-213ENST00000591914 SLC44A3Q8N4M1 653 aa29.29■■■□□ 2.28
SMAD4-213ENST00000591914 ENGASEQ8NFI3 743 aa29.29■■■□□ 2.28
SMAD4-213ENST00000591914 HPDLQ96IR7 371 aa29.29■■■□□ 2.28
SMAD4-213ENST00000591914 ZNF512Q96ME7 567 aaPredicted RBP29.29■■■□□ 2.28
SMAD4-213ENST00000591914 HCN4Q9Y3Q4 1203 aa29.29■■■□□ 2.28
SMAD4-213ENST00000591914 SNX9Q9Y5X1 595 aa29.29■■■□□ 2.28
SMAD4-213ENST00000591914 KIF20AO95235 890 aa29.28■■■□□ 2.28
SMAD4-213ENST00000591914 SMARCB1Q12824 385 aa29.28■■■□□ 2.28
SMAD4-213ENST00000591914 PLD1Q13393 1074 aa29.28■■■□□ 2.28
SMAD4-213ENST00000591914 IQCEQ6IPM2 695 aa29.28■■■□□ 2.28
SMAD4-213ENST00000591914 TTC9BQ8N6N2 239 aa29.28■■■□□ 2.28
SMAD4-213ENST00000591914 TOP6BLQ8N6T0 577 aa29.28■■■□□ 2.28
SMAD4-213ENST00000591914 SPATA18Q8TC71 538 aa29.28■■■□□ 2.28
SMAD4-213ENST00000591914 ING5Q8WYH8 240 aa29.28■■■□□ 2.28
SMAD4-213ENST00000591914 CIZ1Q9ULV3 898 aaPredicted RBP29.28■■■□□ 2.28
SMAD4-213ENST00000591914 SLC27A5Q9Y2P5 690 aa29.28■■■□□ 2.28
SMAD4-213ENST00000591914 R3HCC1Q9Y3T6 440 aaKnown RBP29.28■■■□□ 2.28
SMAD4-213ENST00000591914 NUMBLQ9Y6R0 609 aa29.28■■■□□ 2.28
SMAD4-213ENST00000591914 MICAL2O94851 1124 aa29.27■■■□□ 2.28
SMAD4-213ENST00000591914 NR3C1P04150 777 aa29.27■■■□□ 2.28
SMAD4-213ENST00000591914 EPHA5P54756 1037 aa29.27■■■□□ 2.28
SMAD4-213ENST00000591914 FAM160A1Q05DH4 1040 aa29.27■■■□□ 2.28
SMAD4-213ENST00000591914 LIMS2Q7Z4I7 341 aa29.27■■■□□ 2.28
SMAD4-213ENST00000591914 LRRTM3Q86VH5 581 aa29.27■■■□□ 2.28
SMAD4-213ENST00000591914 FBXL6Q8N531 539 aa29.27■■■□□ 2.28
SMAD4-213ENST00000591914 DNAJC25Q9H1X3 360 aa29.27■■■□□ 2.28
SMAD4-213ENST00000591914 GDE1Q9NZC3 331 aa29.27■■■□□ 2.28
SMAD4-213ENST00000591914 TRAF3IP3Q9Y228 551 aa29.27■■■□□ 2.28
SMAD4-213ENST00000591914 ZNF318Q5VUA4 2279 aa29.26■■■□□ 2.27
SMAD4-213ENST00000591914 ZNF197O14709 1029 aa29.26■■■□□ 2.27
SMAD4-213ENST00000591914 NARSO43776 548 aaKnown RBP29.26■■■□□ 2.27
SMAD4-213ENST00000591914 CCR2P41597 374 aa29.26■■■□□ 2.27
SMAD4-213ENST00000591914 SOWAHAQ2M3V2 549 aa29.26■■■□□ 2.27
SMAD4-213ENST00000591914 PARM1Q6UWI2 310 aa29.26■■■□□ 2.27
SMAD4-213ENST00000591914 PDZD4Q76G19 769 aaPredicted RBP29.26■■■□□ 2.27
SMAD4-213ENST00000591914 LEMD2Q8NC56 503 aa29.26■■■□□ 2.27
SMAD4-213ENST00000591914 PLEKHO2Q8TD55 490 aa29.26■■■□□ 2.27
SMAD4-213ENST00000591914 C2orf15Q8WU43 125 aaKnown RBP29.26■■■□□ 2.27
SMAD4-213ENST00000591914 ZNF516Q92618 1163 aa29.26■■■□□ 2.27
SMAD4-213ENST00000591914 FGF14Q92915 247 aa29.26■■■□□ 2.27
SMAD4-213ENST00000591914 CEBPBP17676 345 aa29.25■■■□□ 2.27
SMAD4-213ENST00000591914 ALDH1A3P47895 512 aa29.25■■■□□ 2.27
SMAD4-213ENST00000591914 EPHB3P54753 998 aa29.25■■■□□ 2.27
SMAD4-213ENST00000591914 CLDN10P78369 228 aa29.25■■■□□ 2.27
SMAD4-213ENST00000591914 CYP4A22Q5TCH4 519 aa29.25■■■□□ 2.27
SMAD4-213ENST00000591914 MTSS1LQ765P7 747 aa29.25■■■□□ 2.27
SMAD4-213ENST00000591914 DPH6Q7L8W6 267 aa29.25■■■□□ 2.27
SMAD4-213ENST00000591914 DCP1BQ8IZD4 617 aaKnown RBP29.25■■■□□ 2.27
SMAD4-213ENST00000591914 ADGRF2Q8IZF7 708 aa29.25■■■□□ 2.27
SMAD4-213ENST00000591914 HS6ST3Q8IZP7 471 aa29.25■■■□□ 2.27
SMAD4-213ENST00000591914 GUF1Q8N442 669 aaKnown RBP29.25■■■□□ 2.27
SMAD4-213ENST00000591914 TCEAL4Q96EI5 215 aa29.25■■■□□ 2.27
SMAD4-213ENST00000591914 ACBD6Q9BR61 282 aa29.25■■■□□ 2.27
SMAD4-213ENST00000591914 ASAH2Q9NR71 780 aa29.25■■■□□ 2.27
SMAD4-213ENST00000591914 ARIH1Q9Y4X5 557 aaPredicted RBP29.25■■■□□ 2.27
SMAD4-213ENST00000591914 GABRDO14764 452 aa29.24■■■□□ 2.27
SMAD4-213ENST00000591914 CALUO43852 315 aaPredicted RBP29.24■■■□□ 2.27
SMAD4-213ENST00000591914 CST3P01034 146 aaPredicted RBP29.24■■■□□ 2.27
SMAD4-213ENST00000591914 PDGFBP01127 241 aaPredicted RBP29.24■■■□□ 2.27
SMAD4-213ENST00000591914 TUFMP49411 452 aaKnown RBP29.24■■■□□ 2.27
SMAD4-213ENST00000591914 TSPY1Q01534 308 aa29.24■■■□□ 2.27
SMAD4-213ENST00000591914 PNOCQ13519 176 aa29.24■■■□□ 2.27
SMAD4-213ENST00000591914 POTEHQ6S545 545 aa29.24■■■□□ 2.27
SMAD4-213ENST00000591914 ST13P5Q8NFI4 369 aaPredicted RBP29.24■■■□□ 2.27
SMAD4-213ENST00000591914 SPPL2BQ8TCT7 592 aa29.24■■■□□ 2.27
SMAD4-213ENST00000591914 PARD3BQ8TEW8 1205 aa29.24■■■□□ 2.27
SMAD4-213ENST00000591914 LRRC3Q9BY71 257 aa29.24■■■□□ 2.27
SMAD4-213ENST00000591914 DDX43Q9NXZ2 648 aaKnown RBP29.24■■■□□ 2.27
SMAD4-213ENST00000591914 MAPK8IP1Q9UQF2 711 aa29.24■■■□□ 2.27
SMAD4-213ENST00000591914 ASB3Q9Y575 518 aa29.24■■■□□ 2.27
SMAD4-213ENST00000591914 ZDBF2Q9HCK1 2354 aa29.23■■■□□ 2.27
SMAD4-213ENST00000591914 NRG2O14511 850 aaPredicted RBP29.23■■■□□ 2.27
SMAD4-213ENST00000591914 SOAT2O75908 522 aa29.23■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms