RNA–Protein interactions for RNA: ENST00000591584.1

VPS25-206, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-206ENST00000591584 GJA9P57773 515 aa11.02□□□□□ -0.65
VPS25-206ENST00000591584 PTPN11Q06124 597 aaPredicted RBP11.02□□□□□ -0.65
VPS25-206ENST00000591584 INCA1Q0VD86 236 aa11.02□□□□□ -0.65
VPS25-206ENST00000591584 FSCN1Q16658 493 aaKnown RBP11.02□□□□□ -0.65
VPS25-206ENST00000591584 PRAMEF19Q5SWL8 479 aa11.02□□□□□ -0.65
VPS25-206ENST00000591584 CFAP58Q5T655 872 aa11.02□□□□□ -0.65
VPS25-206ENST00000591584 DNAJC24Q6P3W2 148 aa11.02□□□□□ -0.65
VPS25-206ENST00000591584 DCUN1D2Q6PH85 259 aa11.02□□□□□ -0.65
VPS25-206ENST00000591584 LRIG3Q6UXM1 1119 aa11.02□□□□□ -0.65
VPS25-206ENST00000591584 MMS22LQ6ZRQ5 1243 aa11.02□□□□□ -0.65
VPS25-206ENST00000591584 RSPH3Q86UC2 560 aa11.02□□□□□ -0.65
VPS25-206ENST00000591584 UNC93AQ86WB7 457 aa11.02□□□□□ -0.65
VPS25-206ENST00000591584 KATNAL2Q8IYT4 538 aa11.02□□□□□ -0.65
VPS25-206ENST00000591584 C7orf31Q8N865 590 aa11.02□□□□□ -0.65
VPS25-206ENST00000591584 NIPA2Q8N8Q9 360 aa11.02□□□□□ -0.65
VPS25-206ENST00000591584 EXD1Q8NHP7 514 aa11.02□□□□□ -0.65
VPS25-206ENST00000591584 GRK7Q8WTQ7 553 aa11.02□□□□□ -0.65
VPS25-206ENST00000591584 CASKIN2Q8WXE0 1202 aa11.02□□□□□ -0.65
VPS25-206ENST00000591584 KRT35Q92764 455 aa11.02□□□□□ -0.65
VPS25-206ENST00000591584 MAGOHBQ96A72 148 aaKnown RBP11.02□□□□□ -0.65
VPS25-206ENST00000591584 KIF12Q96FN5 646 aa11.02□□□□□ -0.65
VPS25-206ENST00000591584 RBM41Q96IZ5 413 aaKnown RBP11.02□□□□□ -0.65
VPS25-206ENST00000591584 ZNF668Q96K58 619 aaPredicted RBP11.02□□□□□ -0.65
VPS25-206ENST00000591584 NCAPGQ9BPX3 1015 aa11.02□□□□□ -0.65
VPS25-206ENST00000591584 ERP44Q9BS26 406 aa11.02□□□□□ -0.65
VPS25-206ENST00000591584 MTG1Q9BT17 334 aaPredicted RBP11.02□□□□□ -0.65
VPS25-206ENST00000591584 TRIM6Q9C030 488 aaPredicted RBP11.02□□□□□ -0.65
VPS25-206ENST00000591584 DDX47Q9H0S4 455 aaKnown RBP11.02□□□□□ -0.65
VPS25-206ENST00000591584 DDX56Q9NY93 547 aaKnown RBP11.02□□□□□ -0.65
VPS25-206ENST00000591584 FLRT1Q9NZU1 646 aa11.02□□□□□ -0.65
VPS25-206ENST00000591584 AMACRQ9UHK6 382 aa11.02□□□□□ -0.65
VPS25-206ENST00000591584 NFU1Q9UMS0 254 aa11.02□□□□□ -0.65
VPS25-206ENST00000591584 MCM3APO60318 1980 aa11.01□□□□□ -0.65
VPS25-206ENST00000591584 TCRBV5S1A1TA0A578 114 aa11.01□□□□□ -0.65
VPS25-206ENST00000591584 SIGLEC16A6NMB1 481 aa11.01□□□□□ -0.65
VPS25-206ENST00000591584 M0QZ92 97 aa11.01□□□□□ -0.65
VPS25-206ENST00000591584 ATMINO43313 823 aaPredicted RBP11.01□□□□□ -0.65
VPS25-206ENST00000591584 NPTXRO95502 500 aa11.01□□□□□ -0.65
VPS25-206ENST00000591584 SETSIPP0DME0 302 aa11.01□□□□□ -0.65
VPS25-206ENST00000591584 MYBL2P10244 700 aa11.01□□□□□ -0.65
VPS25-206ENST00000591584 ITGA4P13612 1032 aa11.01□□□□□ -0.65
VPS25-206ENST00000591584 CD19P15391 556 aa11.01□□□□□ -0.65
VPS25-206ENST00000591584 CYP2C19P33261 490 aa11.01□□□□□ -0.65
VPS25-206ENST00000591584 COILP38432 576 aaPredicted RBP11.01□□□□□ -0.65
VPS25-206ENST00000591584 HSPA9P38646 679 aaKnown RBP11.01□□□□□ -0.65
VPS25-206ENST00000591584 GABRB2P47870 512 aa11.01□□□□□ -0.65
VPS25-206ENST00000591584 RAD23BP54727 409 aa11.01□□□□□ -0.65
VPS25-206ENST00000591584 LMNB2Q03252 620 aa11.01□□□□□ -0.65
VPS25-206ENST00000591584 HLTFQ14527 1009 aaKnown RBP eCLIP11.01□□□□□ -0.65
VPS25-206ENST00000591584 TERF2Q15554 542 aa11.01□□□□□ -0.65
VPS25-206ENST00000591584 ZBTB6Q15916 424 aa11.01□□□□□ -0.65
VPS25-206ENST00000591584 KIZQ2M2Z5 673 aa11.01□□□□□ -0.65
VPS25-206ENST00000591584 SGO2Q562F6 1265 aa11.01□□□□□ -0.65
VPS25-206ENST00000591584 ALKAL1Q6UXT8 129 aa11.01□□□□□ -0.65
VPS25-206ENST00000591584 CROCCP2Q86T23 111 aa11.01□□□□□ -0.65
VPS25-206ENST00000591584 CDR2LQ86X02 465 aaPredicted RBP11.01□□□□□ -0.65
VPS25-206ENST00000591584 TMEM192Q8IY95 271 aa11.01□□□□□ -0.65
VPS25-206ENST00000591584 HACE1Q8IYU2 909 aa11.01□□□□□ -0.65
VPS25-206ENST00000591584 EXOC4Q96A65 974 aa11.01□□□□□ -0.65
VPS25-206ENST00000591584 ELMO3Q96BJ8 720 aa11.01□□□□□ -0.65
VPS25-206ENST00000591584 C18orf8Q96DM3 657 aa11.01□□□□□ -0.65
VPS25-206ENST00000591584 ZBTB10Q96DT7 871 aa11.01□□□□□ -0.65
VPS25-206ENST00000591584 FAM84AQ96KN4 292 aa11.01□□□□□ -0.65
VPS25-206ENST00000591584 SNX27Q96L92 541 aa11.01□□□□□ -0.65
VPS25-206ENST00000591584 NT5C1AQ9BXI3 368 aa11.01□□□□□ -0.65
VPS25-206ENST00000591584 FAM49AQ9H0Q0 323 aaPredicted RBP11.01□□□□□ -0.65
VPS25-206ENST00000591584 TSPYL1Q9H0U9 437 aa11.01□□□□□ -0.65
VPS25-206ENST00000591584 CHST12Q9NRB3 414 aa11.01□□□□□ -0.65
VPS25-206ENST00000591584 CNTN3Q9P232 1028 aa11.01□□□□□ -0.65
VPS25-206ENST00000591584 EFR3BQ9Y2G0 817 aa11.01□□□□□ -0.65
VPS25-206ENST00000591584 FAM155AB1AL88 458 aaPredicted RBP11□□□□□ -0.65
VPS25-206ENST00000591584 ADCY6O43306 1168 aa11□□□□□ -0.65
VPS25-206ENST00000591584 KCNE1P15382 129 aa11□□□□□ -0.65
VPS25-206ENST00000591584 DESP17661 470 aa11□□□□□ -0.65
VPS25-206ENST00000591584 BRD2P25440 801 aaKnown RBP11□□□□□ -0.65
VPS25-206ENST00000591584 PTPN7P35236 360 aa11□□□□□ -0.65
VPS25-206ENST00000591584 PURAQ00577 322 aaKnown RBP11□□□□□ -0.65
VPS25-206ENST00000591584 CRHR2Q13324 411 aa11□□□□□ -0.65
VPS25-206ENST00000591584 ZNF211Q13398 564 aaPredicted RBP11□□□□□ -0.65
VPS25-206ENST00000591584 SNX17Q15036 470 aa11□□□□□ -0.65
VPS25-206ENST00000591584 CCNG2Q16589 344 aa11□□□□□ -0.65
VPS25-206ENST00000591584 PTPROQ16827 1216 aa11□□□□□ -0.65
VPS25-206ENST00000591584 HADHQ16836 314 aaKnown RBP11□□□□□ -0.65
VPS25-206ENST00000591584 XKR4Q5GH76 650 aa11□□□□□ -0.65
VPS25-206ENST00000591584 PPP1R15BQ5SWA1 713 aa11□□□□□ -0.65
VPS25-206ENST00000591584 DUPD1Q68J44 220 aa11□□□□□ -0.65
VPS25-206ENST00000591584 CCDC137Q6PK04 289 aaKnown RBP11□□□□□ -0.65
VPS25-206ENST00000591584 LCLAT1Q6UWP7 414 aa11□□□□□ -0.65
VPS25-206ENST00000591584 CEP128Q6ZU80 1094 aa11□□□□□ -0.65
VPS25-206ENST00000591584 DPH6Q7L8W6 267 aa11□□□□□ -0.65
VPS25-206ENST00000591584 POLNQ7Z5Q5 900 aa11□□□□□ -0.65
VPS25-206ENST00000591584 RPAINQ86UA6 219 aa11□□□□□ -0.65
VPS25-206ENST00000591584 PASD1Q8IV76 773 aa11□□□□□ -0.65
VPS25-206ENST00000591584 IQCKQ8N0W5 287 aa11□□□□□ -0.65
VPS25-206ENST00000591584 WDTC1Q8N5D0 677 aa11□□□□□ -0.65
VPS25-206ENST00000591584 PRELID2Q8N945 189 aa11□□□□□ -0.65
VPS25-206ENST00000591584 SLC4A11Q8NBS3 891 aa11□□□□□ -0.65
VPS25-206ENST00000591584 BBOF1Q8ND07 529 aa11□□□□□ -0.65
VPS25-206ENST00000591584 ATL2Q8NHH9 583 aa11□□□□□ -0.65
VPS25-206ENST00000591584 CCHCR1Q8TD31 782 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms