RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 MATR3P43243 847 aaKnown RBP eCLIP11.29□□□□□ -0.6
VPS4B-207ENST00000591519 GRIN1Q05586 938 aa11.29□□□□□ -0.6
VPS4B-207ENST00000591519 PPP2R3AQ06190 1150 aa11.29□□□□□ -0.6
VPS4B-207ENST00000591519 MYBPC2Q14324 1141 aa11.29□□□□□ -0.6
VPS4B-207ENST00000591519 MCM6Q14566 821 aa11.29□□□□□ -0.6
VPS4B-207ENST00000591519 UBXN2BQ14CS0 331 aa11.29□□□□□ -0.6
VPS4B-207ENST00000591519 CENPPQ6IPU0 288 aa11.29□□□□□ -0.6
VPS4B-207ENST00000591519 SLC39A4Q6P5W5 647 aa11.29□□□□□ -0.6
VPS4B-207ENST00000591519 TPRG1Q6ZUI0 275 aa11.29□□□□□ -0.6
VPS4B-207ENST00000591519 ERMP1Q7Z2K6 904 aa11.29□□□□□ -0.6
VPS4B-207ENST00000591519 SUMF1Q8NBK3 374 aa11.29□□□□□ -0.6
VPS4B-207ENST00000591519 KCNG4Q8TDN1 519 aa11.29□□□□□ -0.6
VPS4B-207ENST00000591519 RAD54LQ92698 747 aa11.29□□□□□ -0.6
VPS4B-207ENST00000591519 IRF7Q92985 503 aa11.29□□□□□ -0.6
VPS4B-207ENST00000591519 E2F7Q96AV8 911 aa11.29□□□□□ -0.6
VPS4B-207ENST00000591519 BICD1Q96G01 975 aa11.29□□□□□ -0.6
VPS4B-207ENST00000591519 TMUB1Q9BVT8 246 aa11.29□□□□□ -0.6
VPS4B-207ENST00000591519 ASB7Q9H672 318 aa11.29□□□□□ -0.6
VPS4B-207ENST00000591519 HEBP1Q9NRV9 189 aa11.29□□□□□ -0.6
VPS4B-207ENST00000591519 SPATA6Q9NWH7 488 aaPredicted RBP11.29□□□□□ -0.6
VPS4B-207ENST00000591519 F5P12259 2224 aa11.29□□□□□ -0.6
VPS4B-207ENST00000591519 OTOGLQ3ZCN5 2332 aa11.28□□□□□ -0.6
VPS4B-207ENST00000591519 ANO9A1A5B4 782 aa11.28□□□□□ -0.6
VPS4B-207ENST00000591519 LAMTOR5O43504 91 aa11.28□□□□□ -0.6
VPS4B-207ENST00000591519 FAM13AO94988 1023 aa11.28□□□□□ -0.6
VPS4B-207ENST00000591519 CYP11A1P05108 521 aa11.28□□□□□ -0.6
VPS4B-207ENST00000591519 CPB1P15086 417 aa11.28□□□□□ -0.6
VPS4B-207ENST00000591519 PLCG1P19174 1290 aa11.28□□□□□ -0.6
VPS4B-207ENST00000591519 ID4P47928 161 aa11.28□□□□□ -0.6
VPS4B-207ENST00000591519 DUSP4Q13115 394 aa11.28□□□□□ -0.6
VPS4B-207ENST00000591519 PLD1Q13393 1074 aa11.28□□□□□ -0.6
VPS4B-207ENST00000591519 KARSQ15046 597 aaKnown RBP11.28□□□□□ -0.6
VPS4B-207ENST00000591519 SF3A1Q15459 793 aaKnown RBP11.28□□□□□ -0.6
VPS4B-207ENST00000591519 FOXD4L5Q5VV16 416 aaPredicted RBP11.28□□□□□ -0.6
VPS4B-207ENST00000591519 C9orf57Q5W0N0 161 aa11.28□□□□□ -0.6
VPS4B-207ENST00000591519 OVOS1Q6IE37 1185 aa11.28□□□□□ -0.6
VPS4B-207ENST00000591519 SLFN12LQ6IEE8 588 aa11.28□□□□□ -0.6
VPS4B-207ENST00000591519 VITQ6UXI7 678 aa11.28□□□□□ -0.6
VPS4B-207ENST00000591519 DSTYKQ6XUX3 929 aa11.28□□□□□ -0.6
VPS4B-207ENST00000591519 ZNF720Q7Z2F6 126 aa11.28□□□□□ -0.6
VPS4B-207ENST00000591519 USP37Q86T82 979 aa11.28□□□□□ -0.6
VPS4B-207ENST00000591519 MFSD6LQ8IWD5 586 aa11.28□□□□□ -0.6
VPS4B-207ENST00000591519 TMEM130Q8N3G9 435 aa11.28□□□□□ -0.6
VPS4B-207ENST00000591519 ZBTB44Q8NCP5 570 aa11.28□□□□□ -0.6
VPS4B-207ENST00000591519 DEPDC1BQ8WUY9 529 aa11.28□□□□□ -0.6
VPS4B-207ENST00000591519 FOXD4L4Q8WXT5 416 aaPredicted RBP11.28□□□□□ -0.6
VPS4B-207ENST00000591519 RUBCNQ92622 972 aa11.28□□□□□ -0.6
VPS4B-207ENST00000591519 DNAJC25Q9H1X3 360 aa11.28□□□□□ -0.6
VPS4B-207ENST00000591519 CRISPLD1Q9H336 500 aa11.28□□□□□ -0.6
VPS4B-207ENST00000591519 ZNF334Q9HCZ1 680 aaPredicted RBP11.28□□□□□ -0.6
VPS4B-207ENST00000591519 ASAH2Q9NR71 780 aa11.28□□□□□ -0.6
VPS4B-207ENST00000591519 ASB3Q9Y575 518 aa11.28□□□□□ -0.6
VPS4B-207ENST00000591519 PCDHGA2Q9Y5H1 932 aa11.28□□□□□ -0.6
VPS4B-207ENST00000591519 TIMM13Q9Y5L4 95 aaPredicted RBP11.28□□□□□ -0.6
VPS4B-207ENST00000591519 COL4A3Q01955 1670 aa11.27□□□□□ -0.6
VPS4B-207ENST00000591519 ANKRD63C9JTQ0 380 aa11.27□□□□□ -0.61
VPS4B-207ENST00000591519 K7ENM7 598 aa11.27□□□□□ -0.61
VPS4B-207ENST00000591519 ARNTLO00327 626 aa11.27□□□□□ -0.61
VPS4B-207ENST00000591519 SPTLC1O15269 473 aa11.27□□□□□ -0.61
VPS4B-207ENST00000591519 KINO60870 393 aaKnown RBP11.27□□□□□ -0.61
VPS4B-207ENST00000591519 LILRB5O75023 590 aa11.27□□□□□ -0.61
VPS4B-207ENST00000591519 MYL4P12829 197 aa11.27□□□□□ -0.61
VPS4B-207ENST00000591519 SYT1P21579 422 aa11.27□□□□□ -0.61
VPS4B-207ENST00000591519 WEE1P30291 646 aa11.27□□□□□ -0.61
VPS4B-207ENST00000591519 GUCY2FP51841 1108 aa11.27□□□□□ -0.61
VPS4B-207ENST00000591519 EPHB3P54753 998 aa11.27□□□□□ -0.61
VPS4B-207ENST00000591519 DHX8Q14562 1220 aaKnown RBP11.27□□□□□ -0.61
VPS4B-207ENST00000591519 PTPAQ15257 358 aa11.27□□□□□ -0.61
VPS4B-207ENST00000591519 JADE1Q6IE81 842 aa11.27□□□□□ -0.61
VPS4B-207ENST00000591519 TMC8Q8IU68 726 aa11.27□□□□□ -0.61
VPS4B-207ENST00000591519 SHKBP1Q8TBC3 707 aa11.27□□□□□ -0.61
VPS4B-207ENST00000591519 ZSCAN18Q8TBC5 510 aaPredicted RBP11.27□□□□□ -0.61
VPS4B-207ENST00000591519 LARP4BQ92615 738 aaKnown RBP11.27□□□□□ -0.61
VPS4B-207ENST00000591519 SENP8Q96LD8 212 aa11.27□□□□□ -0.61
VPS4B-207ENST00000591519 PGLYRP2Q96PD5 576 aa11.27□□□□□ -0.61
VPS4B-207ENST00000591519 IER2Q9BTL4 223 aa11.27□□□□□ -0.61
VPS4B-207ENST00000591519 MSTO1Q9BUK6 570 aa11.27□□□□□ -0.61
VPS4B-207ENST00000591519 STRA6Q9BX79 667 aa11.27□□□□□ -0.61
VPS4B-207ENST00000591519 FAM126AQ9BYI3 521 aaPredicted RBP11.27□□□□□ -0.61
VPS4B-207ENST00000591519 BRD9Q9H8M2 597 aa11.27□□□□□ -0.61
VPS4B-207ENST00000591519 ZSCAN32Q9NX65 697 aa11.27□□□□□ -0.61
VPS4B-207ENST00000591519 C2CD2Q9Y426 696 aa11.27□□□□□ -0.61
VPS4B-207ENST00000591519 YIPF1Q9Y548 306 aa11.27□□□□□ -0.61
VPS4B-207ENST00000591519 PATJQ8NI35 1801 aa11.27□□□□□ -0.61
VPS4B-207ENST00000591519 WDR87Q6ZQQ6 2873 aa11.26□□□□□ -0.61
VPS4B-207ENST00000591519 DCHS1Q96JQ0 3298 aa11.26□□□□□ -0.61
VPS4B-207ENST00000591519 MTMR11A4FU01 709 aa11.26□□□□□ -0.61
VPS4B-207ENST00000591519 PPEF2O14830 753 aa11.26□□□□□ -0.61
VPS4B-207ENST00000591519 S1PR4O95977 384 aa11.26□□□□□ -0.61
VPS4B-207ENST00000591519 KRT18P05783 430 aaKnown RBP11.26□□□□□ -0.61
VPS4B-207ENST00000591519 OR4Q2P0C623 313 aa11.26□□□□□ -0.61
VPS4B-207ENST00000591519 GJA1P17302 382 aa11.26□□□□□ -0.61
VPS4B-207ENST00000591519 PDCP20941 246 aa11.26□□□□□ -0.61
VPS4B-207ENST00000591519 NMT1P30419 496 aaKnown RBP11.26□□□□□ -0.61
VPS4B-207ENST00000591519 GDI1P31150 447 aa11.26□□□□□ -0.61
VPS4B-207ENST00000591519 VIPR2P41587 438 aa11.26□□□□□ -0.61
VPS4B-207ENST00000591519 ALDH1A3P47895 512 aa11.26□□□□□ -0.61
VPS4B-207ENST00000591519 CSTF1Q05048 431 aaKnown RBP11.26□□□□□ -0.61
VPS4B-207ENST00000591519 FCHO2Q0JRZ9 810 aa11.26□□□□□ -0.61
VPS4B-207ENST00000591519 GRM2Q14416 872 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms