RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-223ENST00000591239 SNX9Q9Y5X1 595 aa9.89□□□□□ -0.83
DNMT1-223ENST00000591239 DENND4AQ7Z401 1863 aa9.89□□□□□ -0.83
DNMT1-223ENST00000591239 LRRIQ3A6PVS8 624 aaPredicted RBP9.88□□□□□ -0.83
DNMT1-223ENST00000591239 VNN2O95498 520 aa9.88□□□□□ -0.83
DNMT1-223ENST00000591239 CST3P01034 146 aaPredicted RBP9.88□□□□□ -0.83
DNMT1-223ENST00000591239 FSHRP23945 695 aa9.88□□□□□ -0.83
DNMT1-223ENST00000591239 NR2F2P24468 414 aa9.88□□□□□ -0.83
DNMT1-223ENST00000591239 GBP2P32456 591 aaPredicted RBP9.88□□□□□ -0.83
DNMT1-223ENST00000591239 PRCPP42785 496 aa9.88□□□□□ -0.83
DNMT1-223ENST00000591239 NUBP1P53384 320 aa9.88□□□□□ -0.83
DNMT1-223ENST00000591239 UBE2HP62256 183 aa9.88□□□□□ -0.83
DNMT1-223ENST00000591239 CLDN10P78369 228 aa9.88□□□□□ -0.83
DNMT1-223ENST00000591239 DUSP4Q13115 394 aa9.88□□□□□ -0.83
DNMT1-223ENST00000591239 NFIL3Q16649 462 aa9.88□□□□□ -0.83
DNMT1-223ENST00000591239 PTPN21Q16825 1174 aa9.88□□□□□ -0.83
DNMT1-223ENST00000591239 SOWAHAQ2M3V2 549 aa9.88□□□□□ -0.83
DNMT1-223ENST00000591239 PABPC1LQ4VXU2 614 aaKnown RBP9.88□□□□□ -0.83
DNMT1-223ENST00000591239 SLC39A12Q504Y0 691 aa9.88□□□□□ -0.83
DNMT1-223ENST00000591239 ZCWPW2Q504Y3 356 aa9.88□□□□□ -0.83
DNMT1-223ENST00000591239 COBLL1Q53SF7 1204 aa9.88□□□□□ -0.83
DNMT1-223ENST00000591239 ZNF658Q5TYW1 1059 aaPredicted RBP9.88□□□□□ -0.83
DNMT1-223ENST00000591239 CEP135Q66GS9 1140 aa9.88□□□□□ -0.83
DNMT1-223ENST00000591239 TMEM86AQ8N2M4 240 aa9.88□□□□□ -0.83
DNMT1-223ENST00000591239 ATAD1Q8NBU5 361 aa9.88□□□□□ -0.83
DNMT1-223ENST00000591239 EDAQ92838 391 aa9.88□□□□□ -0.83
DNMT1-223ENST00000591239 MYADMQ96S97 322 aa9.88□□□□□ -0.83
DNMT1-223ENST00000591239 GTPBP4Q9BZE4 634 aaKnown RBP9.88□□□□□ -0.83
DNMT1-223ENST00000591239 ZCWPW1Q9H0M4 648 aa9.88□□□□□ -0.83
DNMT1-223ENST00000591239 EPS15L1Q9UBC2 864 aa9.88□□□□□ -0.83
DNMT1-223ENST00000591239 DNMT3BQ9UBC3 853 aaKnown RBP9.88□□□□□ -0.83
DNMT1-223ENST00000591239 L1RE1Q9UN81 338 aa9.88□□□□□ -0.83
DNMT1-223ENST00000591239 DOCK6Q96HP0 2047 aa9.88□□□□□ -0.83
DNMT1-223ENST00000591239 TSC2P49815 1807 aa9.87□□□□□ -0.83
DNMT1-223ENST00000591239 MTMR11A4FU01 709 aa9.87□□□□□ -0.83
DNMT1-223ENST00000591239 FAM86C2PA6NEL3 165 aa9.87□□□□□ -0.83
DNMT1-223ENST00000591239 MAPK13O15264 365 aa9.87□□□□□ -0.83
DNMT1-223ENST00000591239 GPR37L1O60883 481 aa9.87□□□□□ -0.83
DNMT1-223ENST00000591239 PHACTR2O75167 634 aa9.87□□□□□ -0.83
DNMT1-223ENST00000591239 AKAP3O75969 853 aa9.87□□□□□ -0.83
DNMT1-223ENST00000591239 ASGR2P07307 311 aa9.87□□□□□ -0.83
DNMT1-223ENST00000591239 RHOP08100 348 aa9.87□□□□□ -0.83
DNMT1-223ENST00000591239 LAMP2P13473 410 aa9.87□□□□□ -0.83
DNMT1-223ENST00000591239 PTPN2P17706 415 aa9.87□□□□□ -0.83
DNMT1-223ENST00000591239 RPL13P26373 211 aaKnown RBP9.87□□□□□ -0.83
DNMT1-223ENST00000591239 CDR1P51861 262 aa9.87□□□□□ -0.83
DNMT1-223ENST00000591239 AP3M2P53677 418 aa9.87□□□□□ -0.83
DNMT1-223ENST00000591239 DLG4P78352 724 aa9.87□□□□□ -0.83
DNMT1-223ENST00000591239 ZXDAP98168 799 aa9.87□□□□□ -0.83
DNMT1-223ENST00000591239 TWF1Q12792 350 aa9.87□□□□□ -0.83
DNMT1-223ENST00000591239 SMARCB1Q12824 385 aa9.87□□□□□ -0.83
DNMT1-223ENST00000591239 ADAM9Q13443 819 aa9.87□□□□□ -0.83
DNMT1-223ENST00000591239 TRPC3Q13507 836 aa9.87□□□□□ -0.83
DNMT1-223ENST00000591239 EDRF1Q3B7T1 1238 aa9.87□□□□□ -0.83
DNMT1-223ENST00000591239 TDRD10Q5VZ19 366 aaKnown RBP9.87□□□□□ -0.83
DNMT1-223ENST00000591239 CENPPQ6IPU0 288 aa9.87□□□□□ -0.83
DNMT1-223ENST00000591239 GET4Q7L5D6 327 aaPredicted RBP9.87□□□□□ -0.83
DNMT1-223ENST00000591239 DPH6Q7L8W6 267 aa9.87□□□□□ -0.83
DNMT1-223ENST00000591239 LIMS2Q7Z4I7 341 aa9.87□□□□□ -0.83
DNMT1-223ENST00000591239 LRRTM3Q86VH5 581 aa9.87□□□□□ -0.83
DNMT1-223ENST00000591239 ADGRF2Q8IZF7 708 aa9.87□□□□□ -0.83
DNMT1-223ENST00000591239 ELMOD1Q8N336 334 aa9.87□□□□□ -0.83
DNMT1-223ENST00000591239 TOP6BLQ8N6T0 577 aa9.87□□□□□ -0.83
DNMT1-223ENST00000591239 ITFG1Q8TB96 612 aa9.87□□□□□ -0.83
DNMT1-223ENST00000591239 SPATA18Q8TC71 538 aa9.87□□□□□ -0.83
DNMT1-223ENST00000591239 TMC2Q8TDI7 906 aa9.87□□□□□ -0.83
DNMT1-223ENST00000591239 ZNF512Q96ME7 567 aaPredicted RBP9.87□□□□□ -0.83
DNMT1-223ENST00000591239 CORO1BQ9BR76 489 aa9.87□□□□□ -0.83
DNMT1-223ENST00000591239 CRISPLD1Q9H336 500 aa9.87□□□□□ -0.83
DNMT1-223ENST00000591239 C11orf16Q9NQ32 467 aa9.87□□□□□ -0.83
DNMT1-223ENST00000591239 SORCS3Q9UPU3 1222 aa9.87□□□□□ -0.83
DNMT1-223ENST00000591239 SLC27A5Q9Y2P5 690 aa9.87□□□□□ -0.83
DNMT1-223ENST00000591239 MYO10Q9HD67 2058 aa9.87□□□□□ -0.83
DNMT1-223ENST00000591239 GABRDO14764 452 aa9.86□□□□□ -0.83
DNMT1-223ENST00000591239 IKBKBO14920 756 aa9.86□□□□□ -0.83
DNMT1-223ENST00000591239 C4BPAP04003 597 aaKnown RBP9.86□□□□□ -0.83
DNMT1-223ENST00000591239 ATICP31939 592 aa9.86□□□□□ -0.83
DNMT1-223ENST00000591239 PSMC2P35998 433 aaKnown RBP9.86□□□□□ -0.83
DNMT1-223ENST00000591239 ALDH1A3P47895 512 aa9.86□□□□□ -0.83
DNMT1-223ENST00000591239 LHX1P48742 406 aa9.86□□□□□ -0.83
DNMT1-223ENST00000591239 VAMP7P51809 220 aa9.86□□□□□ -0.83
DNMT1-223ENST00000591239 MYL6P60660 151 aa9.86□□□□□ -0.83
DNMT1-223ENST00000591239 MYL7Q01449 175 aa9.86□□□□□ -0.83
DNMT1-223ENST00000591239 TSPY1Q01534 308 aa9.86□□□□□ -0.83
DNMT1-223ENST00000591239 BIRC3Q13489 604 aa9.86□□□□□ -0.83
DNMT1-223ENST00000591239 MTMR3Q13615 1198 aa9.86□□□□□ -0.83
DNMT1-223ENST00000591239 WDR72Q3MJ13 1102 aa9.86□□□□□ -0.83
DNMT1-223ENST00000591239 TMEM31Q5JXX7 168 aa9.86□□□□□ -0.83
DNMT1-223ENST00000591239 ISM2Q6H9L7 571 aa9.86□□□□□ -0.83
DNMT1-223ENST00000591239 IQCEQ6IPM2 695 aa9.86□□□□□ -0.83
DNMT1-223ENST00000591239 INTS8Q75QN2 995 aaKnown RBP9.86□□□□□ -0.83
DNMT1-223ENST00000591239 FAM186BQ8IYM0 893 aa9.86□□□□□ -0.83
DNMT1-223ENST00000591239 DCP1BQ8IZD4 617 aaKnown RBP9.86□□□□□ -0.83
DNMT1-223ENST00000591239 ADSSL1Q8N142 457 aa9.86□□□□□ -0.83
DNMT1-223ENST00000591239 TTC9BQ8N6N2 239 aa9.86□□□□□ -0.83
DNMT1-223ENST00000591239 FGF13Q92913 245 aa9.86□□□□□ -0.83
DNMT1-223ENST00000591239 SYAP1Q96A49 352 aaPredicted RBP9.86□□□□□ -0.83
DNMT1-223ENST00000591239 EEF2KMTQ96G04 330 aa9.86□□□□□ -0.83
DNMT1-223ENST00000591239 MMS19Q96T76 1030 aa9.86□□□□□ -0.83
DNMT1-223ENST00000591239 ACBD6Q9BR61 282 aa9.86□□□□□ -0.83
DNMT1-223ENST00000591239 XYLT2Q9H1B5 865 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms