RNA–Protein interactions for RNA: ENST00000591055.5

CIRBP-230, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 928 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-230ENST00000591055 DPYSL4O14531 572 aa17.04■□□□□ 0.32
CIRBP-230ENST00000591055 CYP11A1P05108 521 aa17.04■□□□□ 0.32
CIRBP-230ENST00000591055 GABRR2P28476 465 aa17.04■□□□□ 0.32
CIRBP-230ENST00000591055 CCR3P51677 355 aa17.04■□□□□ 0.32
CIRBP-230ENST00000591055 KPNA1P52294 538 aaPredicted RBP17.04■□□□□ 0.32
CIRBP-230ENST00000591055 MLLT6P55198 1093 aaPredicted RBP17.04■□□□□ 0.32
CIRBP-230ENST00000591055 FCHO2Q0JRZ9 810 aa17.04■□□□□ 0.32
CIRBP-230ENST00000591055 SLC39A12Q504Y0 691 aa17.04■□□□□ 0.32
CIRBP-230ENST00000591055 ZC2HC1CQ53FD0 456 aaPredicted RBP17.04■□□□□ 0.32
CIRBP-230ENST00000591055 ARHGAP15Q53QZ3 475 aa17.04■□□□□ 0.32
CIRBP-230ENST00000591055 SLFN12LQ6IEE8 588 aa17.04■□□□□ 0.32
CIRBP-230ENST00000591055 C1orf228Q6PIY5 440 aa17.04■□□□□ 0.32
CIRBP-230ENST00000591055 GAREM2Q75VX8 874 aa17.04■□□□□ 0.32
CIRBP-230ENST00000591055 METTL23Q86XA0 190 aa17.04■□□□□ 0.32
CIRBP-230ENST00000591055 KRI1Q8N9T8 703 aaKnown RBP17.04■□□□□ 0.32
CIRBP-230ENST00000591055 OR10T2Q8NGX3 314 aa17.04■□□□□ 0.32
CIRBP-230ENST00000591055 FAM200AQ8TCP9 573 aa17.04■□□□□ 0.32
CIRBP-230ENST00000591055 MSANTD3Q96H12 275 aa17.04■□□□□ 0.32
CIRBP-230ENST00000591055 C8orf33Q9H7E9 229 aaPredicted RBP17.04■□□□□ 0.32
CIRBP-230ENST00000591055 DLL3Q9NYJ7 618 aa17.04■□□□□ 0.32
CIRBP-230ENST00000591055 HSFX1Q9UBD0 423 aa17.04■□□□□ 0.32
CIRBP-230ENST00000591055 AGO2Q9UKV8 859 aaKnown RBP17.04■□□□□ 0.32
CIRBP-230ENST00000591055 DSEQ9UL01 958 aa17.04■□□□□ 0.32
CIRBP-230ENST00000591055 C2CD2Q9Y426 696 aa17.04■□□□□ 0.32
CIRBP-230ENST00000591055 TISP43B9A030 160 aa17.03■□□□□ 0.32
CIRBP-230ENST00000591055 CYB561D2O14569 222 aa17.03■□□□□ 0.32
CIRBP-230ENST00000591055 CHRNB1P11230 501 aa17.03■□□□□ 0.32
CIRBP-230ENST00000591055 TDGF1P13385 188 aa17.03■□□□□ 0.32
CIRBP-230ENST00000591055 DDIT3P35638 169 aa17.03■□□□□ 0.32
CIRBP-230ENST00000591055 TUFMP49411 452 aaKnown RBP17.03■□□□□ 0.32
CIRBP-230ENST00000591055 VEPH1Q14D04 833 aa17.03■□□□□ 0.32
CIRBP-230ENST00000591055 RSPO4Q2I0M5 234 aaPredicted RBP17.03■□□□□ 0.32
CIRBP-230ENST00000591055 GPR158Q5T848 1215 aa17.03■□□□□ 0.32
CIRBP-230ENST00000591055 SEPT5Q99719 369 aaPredicted RBP17.03■□□□□ 0.32
CIRBP-230ENST00000591055 CCSER1Q9C0I3 900 aa17.03■□□□□ 0.32
CIRBP-230ENST00000591055 ST6GALNAC4Q9H4F1 302 aa17.03■□□□□ 0.32
CIRBP-230ENST00000591055 DPP3Q9NY33 737 aa17.03■□□□□ 0.32
CIRBP-230ENST00000591055 MED19A0JLT2 244 aaPredicted RBP17.02■□□□□ 0.32
CIRBP-230ENST00000591055 SLC38A8A6NNN8 435 aa17.02■□□□□ 0.32
CIRBP-230ENST00000591055 CXCL12P48061 93 aa17.02■□□□□ 0.32
CIRBP-230ENST00000591055 TAF6P49848 677 aa17.02■□□□□ 0.32
CIRBP-230ENST00000591055 LRRC32Q14392 662 aa17.02■□□□□ 0.32
CIRBP-230ENST00000591055 MGAT5BQ3V5L5 792 aa17.02■□□□□ 0.32
CIRBP-230ENST00000591055 ARHGAP29Q52LW3 1261 aa17.02■□□□□ 0.32
CIRBP-230ENST00000591055 THEM5Q8N1Q8 247 aa17.02■□□□□ 0.32
CIRBP-230ENST00000591055 GCNAQ96QF7 691 aa17.02■□□□□ 0.32
CIRBP-230ENST00000591055 LPIN3Q9BQK8 851 aa17.02■□□□□ 0.32
CIRBP-230ENST00000591055 PYM1Q9BRP8 204 aaKnown RBP17.02■□□□□ 0.32
CIRBP-230ENST00000591055 MKNK1Q9BUB5 465 aa17.02■□□□□ 0.32
CIRBP-230ENST00000591055 ZCWPW1Q9H0M4 648 aa17.02■□□□□ 0.32
CIRBP-230ENST00000591055 OBP2AQ9NY56 170 aa17.02■□□□□ 0.32
CIRBP-230ENST00000591055 GMEB2Q9UKD1 530 aa17.02■□□□□ 0.32
CIRBP-230ENST00000591055 RAB23Q9ULC3 237 aa17.02■□□□□ 0.32
CIRBP-230ENST00000591055 STYXL1Q9Y6J8 313 aa17.02■□□□□ 0.32
CIRBP-230ENST00000591055 TSC2P49815 1807 aa17.02■□□□□ 0.31
CIRBP-230ENST00000591055 VPS37CA5D8V6 355 aaPredicted RBP17.01■□□□□ 0.31
CIRBP-230ENST00000591055 SOX9P48436 509 aa17.01■□□□□ 0.31
CIRBP-230ENST00000591055 CDR1P51861 262 aa17.01■□□□□ 0.31
CIRBP-230ENST00000591055 SATB1Q01826 763 aa17.01■□□□□ 0.31
CIRBP-230ENST00000591055 POU5F1Q01860 360 aaKnown RBP17.01■□□□□ 0.31
CIRBP-230ENST00000591055 POSTNQ15063 836 aa17.01■□□□□ 0.31
CIRBP-230ENST00000591055 TAF12Q16514 161 aa17.01■□□□□ 0.31
CIRBP-230ENST00000591055 DYMQ7RTS9 669 aa17.01■□□□□ 0.31
CIRBP-230ENST00000591055 ZNF720Q7Z2F6 126 aa17.01■□□□□ 0.31
CIRBP-230ENST00000591055 SFR1Q86XK3 245 aa17.01■□□□□ 0.31
CIRBP-230ENST00000591055 SPEM1Q8N4L4 309 aa17.01■□□□□ 0.31
CIRBP-230ENST00000591055 POMGNT1Q8WZA1 660 aa17.01■□□□□ 0.31
CIRBP-230ENST00000591055 HVCN1Q96D96 273 aa17.01■□□□□ 0.31
CIRBP-230ENST00000591055 EPSTI1Q96J88 318 aa17.01■□□□□ 0.31
CIRBP-230ENST00000591055 LRRC3BQ96PB8 259 aa17.01■□□□□ 0.31
CIRBP-230ENST00000591055 TASP1Q9H6P5 420 aa17.01■□□□□ 0.31
CIRBP-230ENST00000591055 TCHHQ07283 1943 aa17.01■□□□□ 0.31
CIRBP-230ENST00000591055 NUP210Q8TEM1 1887 aaPredicted RBP17.01■□□□□ 0.31
CIRBP-230ENST00000591055 MYBPHLA2RUH7 354 aa17■□□□□ 0.31
CIRBP-230ENST00000591055 SPECC1L-ADORA2AF8WAN1 911 aa17■□□□□ 0.31
CIRBP-230ENST00000591055 ATF6P18850 670 aa17■□□□□ 0.31
CIRBP-230ENST00000591055 SDHBP21912 280 aa17■□□□□ 0.31
CIRBP-230ENST00000591055 WEE1P30291 646 aa17■□□□□ 0.31
CIRBP-230ENST00000591055 CDC25CP30307 473 aa17■□□□□ 0.31
CIRBP-230ENST00000591055 CYP4F8P98187 520 aa17■□□□□ 0.31
CIRBP-230ENST00000591055 SMARCB1Q12824 385 aa17■□□□□ 0.31
CIRBP-230ENST00000591055 GAS6Q14393 721 aa17■□□□□ 0.31
CIRBP-230ENST00000591055 DGKKQ5KSL6 1271 aa17■□□□□ 0.31
CIRBP-230ENST00000591055 WSCD1Q658N2 575 aa17■□□□□ 0.31
CIRBP-230ENST00000591055 USP49Q70CQ1 688 aa17■□□□□ 0.31
CIRBP-230ENST00000591055 RALGPS2Q86X27 583 aaPredicted RBP17■□□□□ 0.31
CIRBP-230ENST00000591055 CELF5Q8N6W0 485 aaKnown RBP17■□□□□ 0.31
CIRBP-230ENST00000591055 TTC8Q8TAM2 541 aa17■□□□□ 0.31
CIRBP-230ENST00000591055 GIPC2Q8TF65 315 aa17■□□□□ 0.31
CIRBP-230ENST00000591055 C2orf15Q8WU43 125 aaKnown RBP17■□□□□ 0.31
CIRBP-230ENST00000591055 ZFYVE19Q96K21 471 aa17■□□□□ 0.31
CIRBP-230ENST00000591055 IKZF4Q9H2S9 585 aa17■□□□□ 0.31
CIRBP-230ENST00000591055 RBM12Q9NTZ6 932 aaKnown RBP17■□□□□ 0.31
CIRBP-230ENST00000591055 STK17AQ9UEE5 414 aa17■□□□□ 0.31
CIRBP-230ENST00000591055 CCDC39Q9UFE4 941 aa17■□□□□ 0.31
CIRBP-230ENST00000591055 USP18Q9UMW8 372 aa17■□□□□ 0.31
CIRBP-230ENST00000591055 CLIC4Q9Y696 253 aa17■□□□□ 0.31
CIRBP-230ENST00000591055 PRR5-ARHGAP8B1AHC4 643 aa16.99■□□□□ 0.31
CIRBP-230ENST00000591055 TULP1O00294 542 aaPredicted RBP16.99■□□□□ 0.31
CIRBP-230ENST00000591055 IL18RAPO95256 599 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms