RNA–Protein interactions for RNA: ENST00000590696.1

DDX39A-215, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-215ENST00000590696 HSFX1Q9UBD0 423 aa23.54■■□□□ 1.36
DDX39A-215ENST00000590696 CCDC39Q9UFE4 941 aa23.54■■□□□ 1.36
DDX39A-215ENST00000590696 DSEQ9UL01 958 aa23.54■■□□□ 1.36
DDX39A-215ENST00000590696 TSC2P49815 1807 aa23.54■■□□□ 1.36
DDX39A-215ENST00000590696 CYB561D2O14569 222 aa23.53■■□□□ 1.36
DDX39A-215ENST00000590696 CHADO15335 359 aa23.53■■□□□ 1.36
DDX39A-215ENST00000590696 CCNE1P24864 410 aa23.53■■□□□ 1.36
DDX39A-215ENST00000590696 GABRR2P28476 465 aa23.53■■□□□ 1.36
DDX39A-215ENST00000590696 TAF6P49848 677 aa23.53■■□□□ 1.36
DDX39A-215ENST00000590696 CUL4AQ13619 759 aa23.53■■□□□ 1.36
DDX39A-215ENST00000590696 CRELD2Q6UXH1 353 aaPredicted RBP23.53■■□□□ 1.36
DDX39A-215ENST00000590696 ITIH5Q86UX2 942 aa23.53■■□□□ 1.36
DDX39A-215ENST00000590696 METTL23Q86XA0 190 aa23.53■■□□□ 1.36
DDX39A-215ENST00000590696 FAM200AQ8TCP9 573 aa23.53■■□□□ 1.36
DDX39A-215ENST00000590696 POMGNT1Q8WZA1 660 aa23.53■■□□□ 1.36
DDX39A-215ENST00000590696 HVCN1Q96D96 273 aa23.53■■□□□ 1.36
DDX39A-215ENST00000590696 SEPT5Q99719 369 aaPredicted RBP23.53■■□□□ 1.36
DDX39A-215ENST00000590696 PYM1Q9BRP8 204 aaKnown RBP23.53■■□□□ 1.36
DDX39A-215ENST00000590696 MKNK1Q9BUB5 465 aa23.53■■□□□ 1.36
DDX39A-215ENST00000590696 ZCWPW1Q9H0M4 648 aa23.53■■□□□ 1.36
DDX39A-215ENST00000590696 NCDNQ9UBB6 729 aa23.53■■□□□ 1.36
DDX39A-215ENST00000590696 STK17AQ9UEE5 414 aa23.53■■□□□ 1.36
DDX39A-215ENST00000590696 FBXO2Q9UK22 296 aaPredicted RBP23.53■■□□□ 1.36
DDX39A-215ENST00000590696 DMXL1Q9Y485 3027 aa23.53■■□□□ 1.36
DDX39A-215ENST00000590696 FGF19O95750 216 aa23.52■■□□□ 1.36
DDX39A-215ENST00000590696 ADSSP30520 456 aa23.52■■□□□ 1.36
DDX39A-215ENST00000590696 TUFMP49411 452 aaKnown RBP23.52■■□□□ 1.36
DDX39A-215ENST00000590696 POU5F1Q01860 360 aaKnown RBP23.52■■□□□ 1.36
DDX39A-215ENST00000590696 FCHO2Q0JRZ9 810 aa23.52■■□□□ 1.36
DDX39A-215ENST00000590696 MGAT5BQ3V5L5 792 aa23.52■■□□□ 1.36
DDX39A-215ENST00000590696 GPR158Q5T848 1215 aa23.52■■□□□ 1.36
DDX39A-215ENST00000590696 EFCAB13Q8IY85 973 aa23.52■■□□□ 1.36
DDX39A-215ENST00000590696 THEM5Q8N1Q8 247 aa23.52■■□□□ 1.36
DDX39A-215ENST00000590696 LPIN3Q9BQK8 851 aa23.52■■□□□ 1.36
DDX39A-215ENST00000590696 IER2Q9BTL4 223 aa23.52■■□□□ 1.36
DDX39A-215ENST00000590696 FAM126AQ9BYI3 521 aaPredicted RBP23.52■■□□□ 1.36
DDX39A-215ENST00000590696 SRPRBQ9Y5M8 271 aaKnown RBP23.52■■□□□ 1.36
DDX39A-215ENST00000590696 SCN1AP35498 2009 aa23.52■■□□□ 1.36
DDX39A-215ENST00000590696 DPYSL4O14531 572 aa23.51■■□□□ 1.35
DDX39A-215ENST00000590696 PPP1R37O75864 691 aa23.51■■□□□ 1.35
DDX39A-215ENST00000590696 CHRNB1P11230 501 aa23.51■■□□□ 1.35
DDX39A-215ENST00000590696 PDCP20941 246 aa23.51■■□□□ 1.35
DDX39A-215ENST00000590696 MLLT6P55198 1093 aaPredicted RBP23.51■■□□□ 1.35
DDX39A-215ENST00000590696 POSTNQ15063 836 aa23.51■■□□□ 1.35
DDX39A-215ENST00000590696 ARHGAP15Q53QZ3 475 aa23.51■■□□□ 1.35
DDX39A-215ENST00000590696 RRAGBQ5VZM2 374 aa23.51■■□□□ 1.35
DDX39A-215ENST00000590696 MAMSTRQ6ZN01 415 aa23.51■■□□□ 1.35
DDX39A-215ENST00000590696 SV2BQ7L1I2 683 aa23.51■■□□□ 1.35
DDX39A-215ENST00000590696 CLIC6Q96NY7 704 aa23.51■■□□□ 1.35
DDX39A-215ENST00000590696 STRA6Q9BX79 667 aa23.51■■□□□ 1.35
DDX39A-215ENST00000590696 EPC1Q9H2F5 836 aa23.51■■□□□ 1.35
DDX39A-215ENST00000590696 MRPL44Q9H9J2 332 aaKnown RBP23.51■■□□□ 1.35
DDX39A-215ENST00000590696 TBC1D7Q9P0N9 293 aa23.51■■□□□ 1.35
DDX39A-215ENST00000590696 SEL1LQ9UBV2 794 aa23.51■■□□□ 1.35
DDX39A-215ENST00000590696 OTOGLQ3ZCN5 2332 aa23.5■■□□□ 1.35
DDX39A-215ENST00000590696 MYMKA6NI61 221 aa23.5■■□□□ 1.35
DDX39A-215ENST00000590696 SLC38A8A6NNN8 435 aa23.5■■□□□ 1.35
DDX39A-215ENST00000590696 ATF6P18850 670 aa23.5■■□□□ 1.35
DDX39A-215ENST00000590696 SOX9P48436 509 aa23.5■■□□□ 1.35
DDX39A-215ENST00000590696 KPNA1P52294 538 aaPredicted RBP23.5■■□□□ 1.35
DDX39A-215ENST00000590696 KCNA1Q09470 495 aa23.5■■□□□ 1.35
DDX39A-215ENST00000590696 VEPH1Q14D04 833 aa23.5■■□□□ 1.35
DDX39A-215ENST00000590696 WSCD1Q658N2 575 aa23.5■■□□□ 1.35
DDX39A-215ENST00000590696 FAM173BQ6P4H8 233 aa23.5■■□□□ 1.35
DDX39A-215ENST00000590696 LRRTM3Q86VH5 581 aa23.5■■□□□ 1.35
DDX39A-215ENST00000590696 DNAJC19Q96DA6 116 aa23.5■■□□□ 1.35
DDX39A-215ENST00000590696 LRRC3BQ96PB8 259 aa23.5■■□□□ 1.35
DDX39A-215ENST00000590696 C8orf33Q9H7E9 229 aaPredicted RBP23.5■■□□□ 1.35
DDX39A-215ENST00000590696 SMG5Q9UPR3 1016 aaKnown RBP23.5■■□□□ 1.35
DDX39A-215ENST00000590696 EXOC7Q9UPT5 735 aa23.5■■□□□ 1.35
DDX39A-215ENST00000590696 KPNA7A9QM74 516 aa23.49■■□□□ 1.35
DDX39A-215ENST00000590696 TULP1O00294 542 aaPredicted RBP23.49■■□□□ 1.35
DDX39A-215ENST00000590696 IL18RAPO95256 599 aa23.49■■□□□ 1.35
DDX39A-215ENST00000590696 TDGF1P13385 188 aa23.49■■□□□ 1.35
DDX39A-215ENST00000590696 GAP43P17677 238 aa23.49■■□□□ 1.35
DDX39A-215ENST00000590696 TXLNAP40222 546 aa23.49■■□□□ 1.35
DDX39A-215ENST00000590696 CCR3P51677 355 aa23.49■■□□□ 1.35
DDX39A-215ENST00000590696 CYP4F8P98187 520 aa23.49■■□□□ 1.35
DDX39A-215ENST00000590696 CEBPZQ03701 1054 aaKnown RBP23.49■■□□□ 1.35
DDX39A-215ENST00000590696 RESTQ13127 1097 aa23.49■■□□□ 1.35
DDX39A-215ENST00000590696 PPP2R5DQ14738 602 aa23.49■■□□□ 1.35
DDX39A-215ENST00000590696 SV2CQ496J9 727 aa23.49■■□□□ 1.35
DDX39A-215ENST00000590696 GIPC2Q8TF65 315 aa23.49■■□□□ 1.35
DDX39A-215ENST00000590696 C2orf15Q8WU43 125 aaKnown RBP23.49■■□□□ 1.35
DDX39A-215ENST00000590696 MSANTD3Q96H12 275 aa23.49■■□□□ 1.35
DDX39A-215ENST00000590696 ACCSQ96QU6 501 aa23.49■■□□□ 1.35
DDX39A-215ENST00000590696 F5P12259 2224 aa23.49■■□□□ 1.35
DDX39A-215ENST00000590696 NRLP54845 237 aa23.48■■□□□ 1.35
DDX39A-215ENST00000590696 SMARCB1Q12824 385 aa23.48■■□□□ 1.35
DDX39A-215ENST00000590696 PUM1Q14671 1186 aaKnown RBP eCLIP23.48■■□□□ 1.35
DDX39A-215ENST00000590696 TAF12Q16514 161 aa23.48■■□□□ 1.35
DDX39A-215ENST00000590696 ARHGAP29Q52LW3 1261 aa23.48■■□□□ 1.35
DDX39A-215ENST00000590696 L1TD1Q5T7N2 865 aaKnown RBP23.48■■□□□ 1.35
DDX39A-215ENST00000590696 C1orf228Q6PIY5 440 aa23.48■■□□□ 1.35
DDX39A-215ENST00000590696 DGLUCYQ7Z3D6 616 aa23.48■■□□□ 1.35
DDX39A-215ENST00000590696 NT5DC4Q86YG4 428 aa23.48■■□□□ 1.35
DDX39A-215ENST00000590696 ZSWIM2Q8NEG5 633 aa23.48■■□□□ 1.35
DDX39A-215ENST00000590696 TTC8Q8TAM2 541 aa23.48■■□□□ 1.35
DDX39A-215ENST00000590696 SPPL2BQ8TCT7 592 aa23.48■■□□□ 1.35
DDX39A-215ENST00000590696 SECISBP2LQ93073 1101 aaKnown RBP23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms