RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 SYCE2Q6PIF2 218 aa22.86■■□□□ 1.25
ATG4D-212ENST00000590096 C15orf39Q6ZRI6 1047 aa22.86■■□□□ 1.25
ATG4D-212ENST00000590096 ADGRF2Q8IZF7 708 aa22.86■■□□□ 1.25
ATG4D-212ENST00000590096 SMRP1Q8NCR6 262 aa22.86■■□□□ 1.25
ATG4D-212ENST00000590096 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.86■■□□□ 1.25
ATG4D-212ENST00000590096 ZNF461Q8TAF7 563 aa22.86■■□□□ 1.25
ATG4D-212ENST00000590096 ASB2Q96Q27 587 aa22.86■■□□□ 1.25
ATG4D-212ENST00000590096 APOL5Q9BWW9 433 aa22.86■■□□□ 1.25
ATG4D-212ENST00000590096 IMPG2Q9BZV3 1241 aa22.86■■□□□ 1.25
ATG4D-212ENST00000590096 ANO10Q9NW15 660 aa22.86■■□□□ 1.25
ATG4D-212ENST00000590096 MUC3AQ02505 3323 aa22.86■■□□□ 1.25
ATG4D-212ENST00000590096 WDR27A2RRH5 827 aa22.85■■□□□ 1.25
ATG4D-212ENST00000590096 CCDC192P0DO97 292 aa22.85■■□□□ 1.25
ATG4D-212ENST00000590096 P4HA1P13674 534 aa22.85■■□□□ 1.25
ATG4D-212ENST00000590096 ELF1P32519 619 aa22.85■■□□□ 1.25
ATG4D-212ENST00000590096 MYL7Q01449 175 aa22.85■■□□□ 1.25
ATG4D-212ENST00000590096 STX1AQ16623 288 aa22.85■■□□□ 1.25
ATG4D-212ENST00000590096 SOWAHAQ2M3V2 549 aa22.85■■□□□ 1.25
ATG4D-212ENST00000590096 ZNF667Q5HYK9 610 aa22.85■■□□□ 1.25
ATG4D-212ENST00000590096 RARS2Q5T160 578 aaKnown RBP22.85■■□□□ 1.25
ATG4D-212ENST00000590096 TPGS2Q68CL5 300 aa22.85■■□□□ 1.25
ATG4D-212ENST00000590096 PTCRAQ6ISU1 281 aaPredicted RBP22.85■■□□□ 1.25
ATG4D-212ENST00000590096 CES5AQ6NT32 575 aa22.85■■□□□ 1.25
ATG4D-212ENST00000590096 CCDC150Q8NCX0 1101 aa22.85■■□□□ 1.25
ATG4D-212ENST00000590096 TAF4BQ92750 862 aa22.85■■□□□ 1.25
ATG4D-212ENST00000590096 XYLT2Q9H1B5 865 aa22.85■■□□□ 1.25
ATG4D-212ENST00000590096 VRTNQ9H8Y1 702 aa22.85■■□□□ 1.25
ATG4D-212ENST00000590096 NXF1Q9UBU9 619 aaKnown RBP22.85■■□□□ 1.25
ATG4D-212ENST00000590096 ABLIM3O94929 683 aa22.84■■□□□ 1.25
ATG4D-212ENST00000590096 LHX1P48742 406 aa22.84■■□□□ 1.25
ATG4D-212ENST00000590096 KCNQ1P51787 676 aa22.84■■□□□ 1.25
ATG4D-212ENST00000590096 ITIH3Q06033 890 aa22.84■■□□□ 1.25
ATG4D-212ENST00000590096 CCDC149Q6ZUS6 474 aa22.84■■□□□ 1.25
ATG4D-212ENST00000590096 C12orf76Q8N812 135 aaPredicted RBP22.84■■□□□ 1.25
ATG4D-212ENST00000590096 TAS1R2Q8TE23 839 aa22.84■■□□□ 1.25
ATG4D-212ENST00000590096 SLC35C1Q96A29 364 aa22.84■■□□□ 1.25
ATG4D-212ENST00000590096 DDX43Q9NXZ2 648 aaKnown RBP22.84■■□□□ 1.25
ATG4D-212ENST00000590096 AFF4Q9UHB7 1163 aaKnown RBP22.84■■□□□ 1.25
ATG4D-212ENST00000590096 XIRP2A4UGR9 3374 aa22.83■■□□□ 1.25
ATG4D-212ENST00000590096 MBTPS2O43462 519 aa22.83■■□□□ 1.25
ATG4D-212ENST00000590096 OR4Q2P0C623 313 aa22.83■■□□□ 1.25
ATG4D-212ENST00000590096 MARSP56192 900 aaKnown RBP22.83■■□□□ 1.25
ATG4D-212ENST00000590096 TSPY1Q01534 308 aa22.83■■□□□ 1.25
ATG4D-212ENST00000590096 CREBRFQ8IUR6 639 aa22.83■■□□□ 1.25
ATG4D-212ENST00000590096 FBXL13Q8NEE6 735 aa22.83■■□□□ 1.25
ATG4D-212ENST00000590096 OR10T2Q8NGX3 314 aa22.83■■□□□ 1.25
ATG4D-212ENST00000590096 MED15Q96RN5 788 aa22.83■■□□□ 1.25
ATG4D-212ENST00000590096 S1PR5Q9H228 398 aa22.83■■□□□ 1.25
ATG4D-212ENST00000590096 ADAM7Q9H2U9 754 aa22.83■■□□□ 1.25
ATG4D-212ENST00000590096 ZDHHC7Q9NXF8 308 aa22.83■■□□□ 1.25
ATG4D-212ENST00000590096 MAFFQ9ULX9 164 aa22.83■■□□□ 1.25
ATG4D-212ENST00000590096 GRXCR2A6NFK2 248 aa22.82■■□□□ 1.24
ATG4D-212ENST00000590096 ZMYND10O75800 440 aa22.82■■□□□ 1.24
ATG4D-212ENST00000590096 ASS1P00966 412 aaKnown RBP22.82■■□□□ 1.24
ATG4D-212ENST00000590096 C8AP07357 584 aa22.82■■□□□ 1.24
ATG4D-212ENST00000590096 ATF2P15336 505 aa22.82■■□□□ 1.24
ATG4D-212ENST00000590096 PCSK1P29120 753 aa22.82■■□□□ 1.24
ATG4D-212ENST00000590096 ADCY1Q08828 1119 aa22.82■■□□□ 1.24
ATG4D-212ENST00000590096 GPR17Q13304 367 aa22.82■■□□□ 1.24
ATG4D-212ENST00000590096 SKOR2Q2VWA4 1001 aaPredicted RBP22.82■■□□□ 1.24
ATG4D-212ENST00000590096 UVSSAQ2YD98 709 aa22.82■■□□□ 1.24
ATG4D-212ENST00000590096 TJAP1Q5JTD0 557 aa22.82■■□□□ 1.24
ATG4D-212ENST00000590096 PPM1LQ5SGD2 360 aa22.82■■□□□ 1.24
ATG4D-212ENST00000590096 TMC5Q6UXY8 1006 aa22.82■■□□□ 1.24
ATG4D-212ENST00000590096 RTL10Q7L3V2 364 aa22.82■■□□□ 1.24
ATG4D-212ENST00000590096 LIMS2Q7Z4I7 341 aa22.82■■□□□ 1.24
ATG4D-212ENST00000590096 FAM114A1Q8IWE2 563 aa22.82■■□□□ 1.24
ATG4D-212ENST00000590096 DCP1BQ8IZD4 617 aaKnown RBP22.82■■□□□ 1.24
ATG4D-212ENST00000590096 CMASQ8NFW8 434 aaPredicted RBP22.82■■□□□ 1.24
ATG4D-212ENST00000590096 SLC7A14Q8TBB6 771 aa22.82■■□□□ 1.24
ATG4D-212ENST00000590096 CNOT6LQ96LI5 555 aaKnown RBP22.82■■□□□ 1.24
ATG4D-212ENST00000590096 TMEM209Q96SK2 561 aa22.82■■□□□ 1.24
ATG4D-212ENST00000590096 RTP3Q9BQQ7 232 aa22.82■■□□□ 1.24
ATG4D-212ENST00000590096 ACBD6Q9BR61 282 aa22.82■■□□□ 1.24
ATG4D-212ENST00000590096 ZCWPW1Q9H0M4 648 aa22.82■■□□□ 1.24
ATG4D-212ENST00000590096 SNX25Q9H3E2 840 aa22.82■■□□□ 1.24
ATG4D-212ENST00000590096 THAP9Q9H5L6 903 aa22.82■■□□□ 1.24
ATG4D-212ENST00000590096 POLIQ9UNA4 740 aa22.82■■□□□ 1.24
ATG4D-212ENST00000590096 USP15Q9Y4E8 981 aaPredicted RBP22.82■■□□□ 1.24
ATG4D-212ENST00000590096 CCDC195A0A1B0GUA6 201 aa22.81■■□□□ 1.24
ATG4D-212ENST00000590096 PRRG1O14668 218 aa22.81■■□□□ 1.24
ATG4D-212ENST00000590096 GABRDO14764 452 aa22.81■■□□□ 1.24
ATG4D-212ENST00000590096 N4BP1O75113 896 aaKnown RBP22.81■■□□□ 1.24
ATG4D-212ENST00000590096 TACC1O75410 805 aa22.81■■□□□ 1.24
ATG4D-212ENST00000590096 RFPL2O75678 378 aa22.81■■□□□ 1.24
ATG4D-212ENST00000590096 LETM1O95202 739 aaPredicted RBP22.81■■□□□ 1.24
ATG4D-212ENST00000590096 FAM163BP0C2L3 166 aa22.81■■□□□ 1.24
ATG4D-212ENST00000590096 WARSP23381 471 aaKnown RBP22.81■■□□□ 1.24
ATG4D-212ENST00000590096 NOP14P78316 857 aaKnown RBP22.81■■□□□ 1.24
ATG4D-212ENST00000590096 CBWD6Q4V339 395 aa22.81■■□□□ 1.24
ATG4D-212ENST00000590096 SLC39A12Q504Y0 691 aa22.81■■□□□ 1.24
ATG4D-212ENST00000590096 CBWD3Q5JTY5 395 aa22.81■■□□□ 1.24
ATG4D-212ENST00000590096 CBWD5Q5RIA9 395 aa22.81■■□□□ 1.24
ATG4D-212ENST00000590096 SCARA5Q6ZMJ2 495 aa22.81■■□□□ 1.24
ATG4D-212ENST00000590096 RNF19BQ6ZMZ0 732 aa22.81■■□□□ 1.24
ATG4D-212ENST00000590096 OSTM1Q86WC4 334 aa22.81■■□□□ 1.24
ATG4D-212ENST00000590096 TRIM59Q8IWR1 403 aa22.81■■□□□ 1.24
ATG4D-212ENST00000590096 KBTBD7Q8WVZ9 684 aa22.81■■□□□ 1.24
ATG4D-212ENST00000590096 RIPOR3Q96MK2 946 aa22.81■■□□□ 1.24
ATG4D-212ENST00000590096 PI4K2AQ9BTU6 479 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms