RNA–Protein interactions for RNA: ENST00000589867.2

MBD1-221, Transcript of methyl-CpG binding domain protein 1, human

TSL 3

Gene MBD1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-221	ENST00000589867	TNNC2	P02585	160 aa		18.62	■□□□□ 0.57
MBD1-221	ENST00000589867	C4BPA	P04003	597 aa	Known RBP	18.62	■□□□□ 0.57
MBD1-221	ENST00000589867	CPB1	P15086	417 aa		18.62	■□□□□ 0.57
MBD1-221	ENST00000589867	TNNI1	P19237	187 aa		18.62	■□□□□ 0.57
MBD1-221	ENST00000589867	PMS1	P54277	932 aa	Known RBP	18.62	■□□□□ 0.57
MBD1-221	ENST00000589867	DUSP4	Q13115	394 aa		18.62	■□□□□ 0.57
MBD1-221	ENST00000589867	CCDC142	Q17RM4	750 aa		18.62	■□□□□ 0.57
MBD1-221	ENST00000589867	SLC5A9	Q2M3M2	681 aa		18.62	■□□□□ 0.57
MBD1-221	ENST00000589867	ZNF658	Q5TYW1	1059 aa	Predicted RBP	18.62	■□□□□ 0.57
MBD1-221	ENST00000589867	TDRD10	Q5VZ19	366 aa	Known RBP	18.62	■□□□□ 0.57
MBD1-221	ENST00000589867	OTOP3	Q7RTS5	596 aa		18.62	■□□□□ 0.57
MBD1-221	ENST00000589867	KBTBD7	Q8WVZ9	684 aa		18.62	■□□□□ 0.57
MBD1-221	ENST00000589867	HPDL	Q96IR7	371 aa		18.62	■□□□□ 0.57
MBD1-221	ENST00000589867	DNAJC25	Q9H1X3	360 aa		18.62	■□□□□ 0.57
MBD1-221	ENST00000589867	CEP72	Q9P209	647 aa		18.62	■□□□□ 0.57
MBD1-221	ENST00000589867	EPS15L1	Q9UBC2	864 aa		18.62	■□□□□ 0.57
MBD1-221	ENST00000589867	MAN1B1	Q9UKM7	699 aa		18.62	■□□□□ 0.57
MBD1-221	ENST00000589867	DSE	Q9UL01	958 aa		18.62	■□□□□ 0.57
MBD1-221	ENST00000589867	MAFF	Q9ULX9	164 aa		18.62	■□□□□ 0.57
MBD1-221	ENST00000589867	SNX9	Q9Y5X1	595 aa		18.62	■□□□□ 0.57
MBD1-221	ENST00000589867	ZDBF2	Q9HCK1	2354 aa		18.62	■□□□□ 0.57
MBD1-221	ENST00000589867	CALU	O43852	315 aa	Predicted RBP	18.61	■□□□□ 0.57
MBD1-221	ENST00000589867	CD44	P16070	742 aa	Known RBP	18.61	■□□□□ 0.57
MBD1-221	ENST00000589867	CCR2	P41597	374 aa		18.61	■□□□□ 0.57
MBD1-221	ENST00000589867	ZXDA	P98168	799 aa		18.61	■□□□□ 0.57
MBD1-221	ENST00000589867	PTPN21	Q16825	1174 aa		18.61	■□□□□ 0.57
MBD1-221	ENST00000589867	ZC3H3	Q8IXZ2	948 aa	Known RBP	18.61	■□□□□ 0.57
MBD1-221	ENST00000589867	ELMO3	Q96BJ8	720 aa		18.61	■□□□□ 0.57
MBD1-221	ENST00000589867	FNBP1	Q96RU3	617 aa		18.61	■□□□□ 0.57
MBD1-221	ENST00000589867	LRRC3	Q9BY71	257 aa		18.61	■□□□□ 0.57
MBD1-221	ENST00000589867	SLC27A5	Q9Y2P5	690 aa		18.61	■□□□□ 0.57
MBD1-221	ENST00000589867	YIPF1	Q9Y548	306 aa		18.61	■□□□□ 0.57
MBD1-221	ENST00000589867	PRRG1	O14668	218 aa		18.6	■□□□□ 0.57
MBD1-221	ENST00000589867	XYLB	O75191	536 aa		18.6	■□□□□ 0.57
MBD1-221	ENST00000589867	PRPF40A	O75400	957 aa	Known RBP	18.6	■□□□□ 0.57
MBD1-221	ENST00000589867	MOSPD3	O75425	235 aa		18.6	■□□□□ 0.57
MBD1-221	ENST00000589867	SOAT2	O75908	522 aa		18.6	■□□□□ 0.57
MBD1-221	ENST00000589867	RHO	P08100	348 aa		18.6	■□□□□ 0.57
MBD1-221	ENST00000589867	ALAD	P13716	330 aa		18.6	■□□□□ 0.57
MBD1-221	ENST00000589867	FSHR	P23945	695 aa		18.6	■□□□□ 0.57
MBD1-221	ENST00000589867	NR2F2	P24468	414 aa		18.6	■□□□□ 0.57
MBD1-221	ENST00000589867	ELF1	P32519	619 aa		18.6	■□□□□ 0.57
MBD1-221	ENST00000589867	MYL6	P60660	151 aa		18.6	■□□□□ 0.57
MBD1-221	ENST00000589867	TWF1	Q12792	350 aa		18.6	■□□□□ 0.57
MBD1-221	ENST00000589867	PRSS36	Q5K4E3	855 aa		18.6	■□□□□ 0.57
MBD1-221	ENST00000589867	CEP135	Q66GS9	1140 aa		18.6	■□□□□ 0.57
MBD1-221	ENST00000589867	CLEC17A	Q6ZS10	378 aa		18.6	■□□□□ 0.57
MBD1-221	ENST00000589867	GET4	Q7L5D6	327 aa	Predicted RBP	18.6	■□□□□ 0.57
MBD1-221	ENST00000589867	HS6ST3	Q8IZP7	471 aa		18.6	■□□□□ 0.57
MBD1-221	ENST00000589867	TOP6BL	Q8N6T0	577 aa		18.6	■□□□□ 0.57
MBD1-221	ENST00000589867	TMC2	Q8TDI7	906 aa		18.6	■□□□□ 0.57
MBD1-221	ENST00000589867	EDA	Q92838	391 aa		18.6	■□□□□ 0.57
MBD1-221	ENST00000589867	SMARCE1	Q969G3	411 aa		18.6	■□□□□ 0.57
MBD1-221	ENST00000589867	EEF2KMT	Q96G04	330 aa		18.6	■□□□□ 0.57
MBD1-221	ENST00000589867	AVEN	Q9NQS1	362 aa	Predicted RBP	18.6	■□□□□ 0.57
MBD1-221	ENST00000589867	POLI	Q9UNA4	740 aa		18.6	■□□□□ 0.57
MBD1-221	ENST00000589867	MAPK13	O15264	365 aa		18.59	■□□□□ 0.57
MBD1-221	ENST00000589867	GPR37L1	O60883	481 aa		18.59	■□□□□ 0.57
MBD1-221	ENST00000589867	KIF20A	O95235	890 aa		18.59	■□□□□ 0.57
MBD1-221	ENST00000589867	STAU1	O95793	577 aa	Known RBP	18.59	■□□□□ 0.57
MBD1-221	ENST00000589867	LAMP2	P13473	410 aa		18.59	■□□□□ 0.57
MBD1-221	ENST00000589867	UBE2H	P62256	183 aa		18.59	■□□□□ 0.57
MBD1-221	ENST00000589867	EDRF1	Q3B7T1	1238 aa		18.59	■□□□□ 0.57
MBD1-221	ENST00000589867	SLC39A12	Q504Y0	691 aa		18.59	■□□□□ 0.57
MBD1-221	ENST00000589867	ISM2	Q6H9L7	571 aa		18.59	■□□□□ 0.57
MBD1-221	ENST00000589867	ADGRF2	Q8IZF7	708 aa		18.59	■□□□□ 0.57
MBD1-221	ENST00000589867	ADSSL1	Q8N142	457 aa		18.59	■□□□□ 0.57
MBD1-221	ENST00000589867	PLCD3	Q8N3E9	789 aa		18.59	■□□□□ 0.57
MBD1-221	ENST00000589867	ST13P5	Q8NFI4	369 aa	Predicted RBP	18.59	■□□□□ 0.57
MBD1-221	ENST00000589867	RSAD2	Q8WXG1	361 aa		18.59	■□□□□ 0.57
MBD1-221	ENST00000589867	FGF13	Q92913	245 aa		18.59	■□□□□ 0.57
MBD1-221	ENST00000589867	TCEAL4	Q96EI5	215 aa		18.59	■□□□□ 0.57
MBD1-221	ENST00000589867	CCDC34	Q96HJ3	373 aa		18.59	■□□□□ 0.57
MBD1-221	ENST00000589867	LRFN3	Q9BTN0	628 aa		18.59	■□□□□ 0.57
MBD1-221	ENST00000589867	RMND1	Q9NWS8	449 aa		18.59	■□□□□ 0.57
MBD1-221	ENST00000589867	ZNF318	Q5VUA4	2279 aa		18.59	■□□□□ 0.57
MBD1-221	ENST00000589867	KIN	O60870	393 aa	Known RBP	18.58	■□□□□ 0.56
MBD1-221	ENST00000589867	HUS1	O60921	280 aa		18.58	■□□□□ 0.56
MBD1-221	ENST00000589867	SMC2	O95347	1197 aa		18.58	■□□□□ 0.56
MBD1-221	ENST00000589867	LRG1	P02750	347 aa		18.58	■□□□□ 0.56
MBD1-221	ENST00000589867	ACAT1	P24752	427 aa	Known RBP	18.58	■□□□□ 0.56
MBD1-221	ENST00000589867	LMO2	P25791	158 aa		18.58	■□□□□ 0.56
MBD1-221	ENST00000589867	GBP2	P32456	591 aa	Predicted RBP	18.58	■□□□□ 0.56
MBD1-221	ENST00000589867	EPHA5	P54756	1037 aa		18.58	■□□□□ 0.56
MBD1-221	ENST00000589867	PPP3CA	Q08209	521 aa		18.58	■□□□□ 0.56
MBD1-221	ENST00000589867	ADAM9	Q13443	819 aa		18.58	■□□□□ 0.56
MBD1-221	ENST00000589867	ZACN	Q401N2	412 aa		18.58	■□□□□ 0.56
MBD1-221	ENST00000589867	PABPC1L	Q4VXU2	614 aa	Known RBP	18.58	■□□□□ 0.56
MBD1-221	ENST00000589867	ANKRD40	Q6AI12	368 aa		18.58	■□□□□ 0.56
MBD1-221	ENST00000589867	SV2A	Q7L0J3	742 aa		18.58	■□□□□ 0.56
MBD1-221	ENST00000589867	DPH6	Q7L8W6	267 aa		18.58	■□□□□ 0.56
MBD1-221	ENST00000589867	METTL23	Q86XA0	190 aa		18.58	■□□□□ 0.56
MBD1-221	ENST00000589867	TMC8	Q8IU68	726 aa		18.58	■□□□□ 0.56
MBD1-221	ENST00000589867	NPAS3	Q8IXF0	933 aa		18.58	■□□□□ 0.56
MBD1-221	ENST00000589867	TMEM86A	Q8N2M4	240 aa		18.58	■□□□□ 0.56
MBD1-221	ENST00000589867	SPATA18	Q8TC71	538 aa		18.58	■□□□□ 0.56
MBD1-221	ENST00000589867	ACSF2	Q96CM8	615 aa	Predicted RBP	18.58	■□□□□ 0.56
MBD1-221	ENST00000589867	ASIC4	Q96FT7	647 aa		18.58	■□□□□ 0.56
MBD1-221	ENST00000589867	ACBD6	Q9BR61	282 aa		18.58	■□□□□ 0.56
MBD1-221	ENST00000589867	MRPL45	Q9BRJ2	306 aa	Known RBP	18.58	■□□□□ 0.56

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