RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 OXLD1Q5BKU9 147 aa11.21□□□□□ -0.61
SDF2-208ENST00000589788 TMC5Q6UXY8 1006 aa11.21□□□□□ -0.61
SDF2-208ENST00000589788 SPATA31D4Q6ZUB0 917 aa11.21□□□□□ -0.61
SDF2-208ENST00000589788 NT5DC4Q86YG4 428 aa11.21□□□□□ -0.61
SDF2-208ENST00000589788 BRSK2Q8IWQ3 736 aa11.21□□□□□ -0.61
SDF2-208ENST00000589788 GJD3Q8N144 294 aa11.21□□□□□ -0.61
SDF2-208ENST00000589788 APPL2Q8NEU8 664 aa11.21□□□□□ -0.61
SDF2-208ENST00000589788 CACTINQ8WUQ7 758 aaKnown RBP11.21□□□□□ -0.61
SDF2-208ENST00000589788 SUSD6Q92537 303 aa11.21□□□□□ -0.61
SDF2-208ENST00000589788 SUSD3Q96L08 255 aa11.21□□□□□ -0.61
SDF2-208ENST00000589788 NECTIN4Q96NY8 510 aa11.21□□□□□ -0.61
SDF2-208ENST00000589788 KCTD15Q96SI1 283 aaPredicted RBP11.21□□□□□ -0.61
SDF2-208ENST00000589788 CLSTN3Q9BQT9 956 aa11.21□□□□□ -0.61
SDF2-208ENST00000589788 PLEKHA4Q9H4M7 779 aa11.21□□□□□ -0.61
SDF2-208ENST00000589788 KIAA1586Q9HCI6 787 aa11.21□□□□□ -0.61
SDF2-208ENST00000589788 AGPAT3Q9NRZ7 376 aa11.21□□□□□ -0.61
SDF2-208ENST00000589788 DPP3Q9NY33 737 aa11.21□□□□□ -0.61
SDF2-208ENST00000589788 HSPBP1Q9NZL4 362 aa11.21□□□□□ -0.61
SDF2-208ENST00000589788 CGNQ9P2M7 1197 aaKnown RBP11.21□□□□□ -0.61
SDF2-208ENST00000589788 MTRRQ9UBK8 725 aa11.21□□□□□ -0.61
SDF2-208ENST00000589788 MTCL1Q9Y4B5 1905 aaKnown RBP11.2□□□□□ -0.62
SDF2-208ENST00000589788 UNC80Q8N2C7 3258 aa11.2□□□□□ -0.62
SDF2-208ENST00000589788 H7C4K7 107 aa11.2□□□□□ -0.62
SDF2-208ENST00000589788 CLIC2O15247 247 aa11.2□□□□□ -0.62
SDF2-208ENST00000589788 TGFB1I1O43294 461 aa11.2□□□□□ -0.62
SDF2-208ENST00000589788 TGM5O43548 720 aa11.2□□□□□ -0.62
SDF2-208ENST00000589788 KIF20AO95235 890 aa11.2□□□□□ -0.62
SDF2-208ENST00000589788 PTMSP20962 102 aa11.2□□□□□ -0.62
SDF2-208ENST00000589788 PAX3P23760 479 aa11.2□□□□□ -0.62
SDF2-208ENST00000589788 OR1D2P34982 312 aa11.2□□□□□ -0.62
SDF2-208ENST00000589788 CYP2J2P51589 502 aa11.2□□□□□ -0.62
SDF2-208ENST00000589788 FAM160A1Q05DH4 1040 aa11.2□□□□□ -0.62
SDF2-208ENST00000589788 DPYDQ12882 1025 aa11.2□□□□□ -0.62
SDF2-208ENST00000589788 STK4Q13043 487 aa11.2□□□□□ -0.62
SDF2-208ENST00000589788 INTS6LQ5JSJ4 861 aaKnown RBP11.2□□□□□ -0.62
SDF2-208ENST00000589788 ATAT1Q5SQI0 421 aa11.2□□□□□ -0.62
SDF2-208ENST00000589788 C9orf57Q5W0N0 161 aa11.2□□□□□ -0.62
SDF2-208ENST00000589788 DSTYKQ6XUX3 929 aa11.2□□□□□ -0.62
SDF2-208ENST00000589788 USP37Q86T82 979 aa11.2□□□□□ -0.62
SDF2-208ENST00000589788 FMR1NBQ8N0W7 255 aaPredicted RBP11.2□□□□□ -0.62
SDF2-208ENST00000589788 TMEM130Q8N3G9 435 aa11.2□□□□□ -0.62
SDF2-208ENST00000589788 KREMEN2Q8NCW0 462 aa11.2□□□□□ -0.62
SDF2-208ENST00000589788 ZSWIM2Q8NEG5 633 aa11.2□□□□□ -0.62
SDF2-208ENST00000589788 GOLGA5Q8TBA6 731 aa11.2□□□□□ -0.62
SDF2-208ENST00000589788 HDAC7Q8WUI4 952 aa11.2□□□□□ -0.62
SDF2-208ENST00000589788 PHF7Q9BWX1 381 aaPredicted RBP11.2□□□□□ -0.62
SDF2-208ENST00000589788 HOOK1Q9UJC3 728 aaKnown RBP11.2□□□□□ -0.62
SDF2-208ENST00000589788 BACE2Q9Y5Z0 518 aa11.2□□□□□ -0.62
SDF2-208ENST00000589788 CDY1Q9Y6F8 540 aa11.2□□□□□ -0.62
SDF2-208ENST00000589788 ARHGEF37A1IGU5 675 aa11.19□□□□□ -0.62
SDF2-208ENST00000589788 ADAM12O43184 909 aa11.19□□□□□ -0.62
SDF2-208ENST00000589788 WEE2P0C1S8 567 aa11.19□□□□□ -0.62
SDF2-208ENST00000589788 ARPP19P56211 112 aa11.19□□□□□ -0.62
SDF2-208ENST00000589788 LILRA4P59901 499 aa11.19□□□□□ -0.62
SDF2-208ENST00000589788 RAB33AQ14088 237 aa11.19□□□□□ -0.62
SDF2-208ENST00000589788 SURF1Q15526 300 aa11.19□□□□□ -0.62
SDF2-208ENST00000589788 NFKBIBQ15653 356 aa11.19□□□□□ -0.62
SDF2-208ENST00000589788 CTXN3Q4LDR2 81 aa11.19□□□□□ -0.62
SDF2-208ENST00000589788 LIN9Q5TKA1 542 aa11.19□□□□□ -0.62
SDF2-208ENST00000589788 ZNF280DQ6N043 979 aa11.19□□□□□ -0.62
SDF2-208ENST00000589788 LILRA6Q6PI73 481 aa11.19□□□□□ -0.62
SDF2-208ENST00000589788 GPR149Q86SP6 731 aa11.19□□□□□ -0.62
SDF2-208ENST00000589788 CBWD2Q8IUF1 395 aa11.19□□□□□ -0.62
SDF2-208ENST00000589788 EFCAB13Q8IY85 973 aa11.19□□□□□ -0.62
SDF2-208ENST00000589788 XXYLT1Q8NBI6 393 aa11.19□□□□□ -0.62
SDF2-208ENST00000589788 KIAA0895Q8NCT3 520 aa11.19□□□□□ -0.62
SDF2-208ENST00000589788 RPGRIP1Q96KN7 1286 aa11.19□□□□□ -0.62
SDF2-208ENST00000589788 PDE11AQ9HCR9 933 aa11.19□□□□□ -0.62
SDF2-208ENST00000589788 LMBRD1Q9NUN5 540 aa11.19□□□□□ -0.62
SDF2-208ENST00000589788 R3HCC1Q9Y3T6 440 aaKnown RBP11.19□□□□□ -0.62
SDF2-208ENST00000589788 PCDHB11Q9Y5F2 797 aa11.19□□□□□ -0.62
SDF2-208ENST00000589788 CCDC195A0A1B0GUA6 201 aa11.18□□□□□ -0.62
SDF2-208ENST00000589788 ANO9A1A5B4 782 aa11.18□□□□□ -0.62
SDF2-208ENST00000589788 M0QZQ0 153 aa11.18□□□□□ -0.62
SDF2-208ENST00000589788 PIRO00625 290 aa11.18□□□□□ -0.62
SDF2-208ENST00000589788 PPEF2O14830 753 aa11.18□□□□□ -0.62
SDF2-208ENST00000589788 EXOC3O60645 756 aa11.18□□□□□ -0.62
SDF2-208ENST00000589788 PRPF40AO75400 957 aaKnown RBP11.18□□□□□ -0.62
SDF2-208ENST00000589788 RHOBTB3O94955 611 aa11.18□□□□□ -0.62
SDF2-208ENST00000589788 TNNC2P02585 160 aa11.18□□□□□ -0.62
SDF2-208ENST00000589788 TMEM191BP0C7N4 346 aa11.18□□□□□ -0.62
SDF2-208ENST00000589788 ODC1P11926 461 aa11.18□□□□□ -0.62
SDF2-208ENST00000589788 AARSP49588 968 aaKnown RBP eCLIP11.18□□□□□ -0.62
SDF2-208ENST00000589788 TAF6P49848 677 aa11.18□□□□□ -0.62
SDF2-208ENST00000589788 YWHAHQ04917 246 aaPredicted RBP11.18□□□□□ -0.62
SDF2-208ENST00000589788 KCNB1Q14721 858 aa11.18□□□□□ -0.62
SDF2-208ENST00000589788 SNRNP35Q16560 246 aaKnown RBP11.18□□□□□ -0.62
SDF2-208ENST00000589788 PPM1LQ5SGD2 360 aa11.18□□□□□ -0.62
SDF2-208ENST00000589788 CYP26C1Q6V0L0 522 aa11.18□□□□□ -0.62
SDF2-208ENST00000589788 C15orf39Q6ZRI6 1047 aa11.18□□□□□ -0.62
SDF2-208ENST00000589788 ANKMY2Q8IV38 441 aa11.18□□□□□ -0.62
SDF2-208ENST00000589788 C12orf56Q8IXR9 622 aa11.18□□□□□ -0.62
SDF2-208ENST00000589788 CMASQ8NFW8 434 aaPredicted RBP11.18□□□□□ -0.62
SDF2-208ENST00000589788 SMG7Q92540 1137 aaKnown RBP11.18□□□□□ -0.62
SDF2-208ENST00000589788 ANKRD36BP1Q96IX9 119 aa11.18□□□□□ -0.62
SDF2-208ENST00000589788 ZNF560Q96MR9 790 aa11.18□□□□□ -0.62
SDF2-208ENST00000589788 FNBP1Q96RU3 617 aa11.18□□□□□ -0.62
SDF2-208ENST00000589788 POMKQ9H5K3 350 aa11.18□□□□□ -0.62
SDF2-208ENST00000589788 PIDD1Q9HB75 910 aa11.18□□□□□ -0.62
SDF2-208ENST00000589788 CD320Q9NPF0 282 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms