RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 CAPN11Q9UMQ6 739 aa18.13■□□□□ 0.49
SCAMP4-211ENST00000588907 L1RE1Q9UN81 338 aa18.13■□□□□ 0.49
SCAMP4-211ENST00000588907 TSC2P49815 1807 aa18.12■□□□□ 0.49
SCAMP4-211ENST00000588907 F8VZ95 297 aa18.12■□□□□ 0.49
SCAMP4-211ENST00000588907 F8W810 466 aa18.12■□□□□ 0.49
SCAMP4-211ENST00000588907 GABRDO14764 452 aa18.12■□□□□ 0.49
SCAMP4-211ENST00000588907 LRRN2O75325 713 aa18.12■□□□□ 0.49
SCAMP4-211ENST00000588907 URODP06132 367 aa18.12■□□□□ 0.49
SCAMP4-211ENST00000588907 MYOGP15173 224 aa18.12■□□□□ 0.49
SCAMP4-211ENST00000588907 STAT1P42224 750 aa18.12■□□□□ 0.49
SCAMP4-211ENST00000588907 GLUD2P49448 558 aa18.12■□□□□ 0.49
SCAMP4-211ENST00000588907 BPIFB4P59827 614 aa18.12■□□□□ 0.49
SCAMP4-211ENST00000588907 ZBED6P86452 979 aa18.12■□□□□ 0.49
SCAMP4-211ENST00000588907 TSR1Q2NL82 804 aaKnown RBP18.12■□□□□ 0.49
SCAMP4-211ENST00000588907 WSCD1Q658N2 575 aa18.12■□□□□ 0.49
SCAMP4-211ENST00000588907 PDE12Q6L8Q7 609 aaKnown RBP18.12■□□□□ 0.49
SCAMP4-211ENST00000588907 ZNF280DQ6N043 979 aa18.12■□□□□ 0.49
SCAMP4-211ENST00000588907 FBXO22Q8NEZ5 403 aa18.12■□□□□ 0.49
SCAMP4-211ENST00000588907 BCL7CQ8WUZ0 217 aaPredicted RBP18.12■□□□□ 0.49
SCAMP4-211ENST00000588907 SYN2Q92777 582 aaPredicted RBP18.12■□□□□ 0.49
SCAMP4-211ENST00000588907 KREMEN1Q96MU8 473 aa18.12■□□□□ 0.49
SCAMP4-211ENST00000588907 NKX2-4Q9H2Z4 354 aa18.12■□□□□ 0.49
SCAMP4-211ENST00000588907 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.12■□□□□ 0.49
SCAMP4-211ENST00000588907 CHST7Q9NS84 486 aa18.12■□□□□ 0.49
SCAMP4-211ENST00000588907 CNTN6Q9UQ52 1028 aa18.12■□□□□ 0.49
SCAMP4-211ENST00000588907 OR6C75A6NL08 312 aa18.11■□□□□ 0.49
SCAMP4-211ENST00000588907 EPHB6O15197 1021 aa18.11■□□□□ 0.49
SCAMP4-211ENST00000588907 CILPO75339 1184 aa18.11■□□□□ 0.49
SCAMP4-211ENST00000588907 GYPCP04921 128 aa18.11■□□□□ 0.49
SCAMP4-211ENST00000588907 WEE2P0C1S8 567 aa18.11■□□□□ 0.49
SCAMP4-211ENST00000588907 TKTP29401 623 aaKnown RBP18.11■□□□□ 0.49
SCAMP4-211ENST00000588907 GNL1P36915 607 aaPredicted RBP18.11■□□□□ 0.49
SCAMP4-211ENST00000588907 PBX2P40425 430 aa18.11■□□□□ 0.49
SCAMP4-211ENST00000588907 JAM2P57087 298 aa18.11■□□□□ 0.49
SCAMP4-211ENST00000588907 DSG1Q02413 1049 aa18.11■□□□□ 0.49
SCAMP4-211ENST00000588907 DRAP1Q14919 205 aaPredicted RBP18.11■□□□□ 0.49
SCAMP4-211ENST00000588907 ARHGAP44Q17R89 818 aa18.11■□□□□ 0.49
SCAMP4-211ENST00000588907 GJB7Q6PEY0 223 aa18.11■□□□□ 0.49
SCAMP4-211ENST00000588907 UBR7Q8N806 425 aa18.11■□□□□ 0.49
SCAMP4-211ENST00000588907 OR6B3Q8NGW1 331 aa18.11■□□□□ 0.49
SCAMP4-211ENST00000588907 KBTBD7Q8WVZ9 684 aa18.11■□□□□ 0.49
SCAMP4-211ENST00000588907 PIK3R5Q8WYR1 880 aa18.11■□□□□ 0.49
SCAMP4-211ENST00000588907 ARID3AQ99856 593 aa18.11■□□□□ 0.49
SCAMP4-211ENST00000588907 ACBD6Q9BR61 282 aa18.11■□□□□ 0.49
SCAMP4-211ENST00000588907 C17orf80Q9BSJ5 609 aa18.11■□□□□ 0.49
SCAMP4-211ENST00000588907 NT5C1AQ9BXI3 368 aa18.11■□□□□ 0.49
SCAMP4-211ENST00000588907 LMAN2LQ9H0V9 348 aa18.11■□□□□ 0.49
SCAMP4-211ENST00000588907 NLRC4Q9NPP4 1024 aa18.11■□□□□ 0.49
SCAMP4-211ENST00000588907 KIAA1257Q9ULG3 409 aa18.11■□□□□ 0.49
SCAMP4-211ENST00000588907 STXBP5LQ9Y2K9 1186 aa18.11■□□□□ 0.49
SCAMP4-211ENST00000588907 PCDHB4Q9Y5E5 795 aa18.11■□□□□ 0.49
SCAMP4-211ENST00000588907 A8MXQ7 604 aa18.1■□□□□ 0.49
SCAMP4-211ENST00000588907 H3BNC9 293 aa18.1■□□□□ 0.49
SCAMP4-211ENST00000588907 I3L4J1 428 aa18.1■□□□□ 0.49
SCAMP4-211ENST00000588907 PAEPP09466 180 aa18.1■□□□□ 0.49
SCAMP4-211ENST00000588907 KRT5P13647 590 aa18.1■□□□□ 0.49
SCAMP4-211ENST00000588907 CD58P19256 250 aa18.1■□□□□ 0.49
SCAMP4-211ENST00000588907 ACO1P21399 889 aaKnown RBP18.1■□□□□ 0.49
SCAMP4-211ENST00000588907 SOX5P35711 763 aa18.1■□□□□ 0.49
SCAMP4-211ENST00000588907 GSDMDP57764 484 aa18.1■□□□□ 0.49
SCAMP4-211ENST00000588907 TSPY1Q01534 308 aa18.1■□□□□ 0.49
SCAMP4-211ENST00000588907 APBA1Q02410 837 aa18.1■□□□□ 0.49
SCAMP4-211ENST00000588907 SMARCB1Q12824 385 aa18.1■□□□□ 0.49
SCAMP4-211ENST00000588907 TBX2Q13207 712 aaPredicted RBP18.1■□□□□ 0.49
SCAMP4-211ENST00000588907 MRPL58Q14197 206 aaKnown RBP18.1■□□□□ 0.49
SCAMP4-211ENST00000588907 MAPRE1Q15691 268 aaKnown RBP18.1■□□□□ 0.49
SCAMP4-211ENST00000588907 VARS2Q5ST30 1063 aaKnown RBP18.1■□□□□ 0.49
SCAMP4-211ENST00000588907 TMEM270Q6UE05 265 aa18.1■□□□□ 0.49
SCAMP4-211ENST00000588907 CEP57Q86XR8 500 aa18.1■□□□□ 0.49
SCAMP4-211ENST00000588907 FAM71AQ8IYT1 594 aa18.1■□□□□ 0.49
SCAMP4-211ENST00000588907 VPS52Q8N1B4 723 aa18.1■□□□□ 0.49
SCAMP4-211ENST00000588907 BAP1Q92560 729 aa18.1■□□□□ 0.49
SCAMP4-211ENST00000588907 MRPL45Q9BRJ2 306 aaKnown RBP18.1■□□□□ 0.49
SCAMP4-211ENST00000588907 NGRNQ9NPE2 291 aaKnown RBP18.1■□□□□ 0.49
SCAMP4-211ENST00000588907 MRPL17Q9NRX2 175 aaKnown RBP18.1■□□□□ 0.49
SCAMP4-211ENST00000588907 DDX43Q9NXZ2 648 aaKnown RBP18.1■□□□□ 0.49
SCAMP4-211ENST00000588907 CDH9Q9ULB4 789 aa18.1■□□□□ 0.49
SCAMP4-211ENST00000588907 COLQQ9Y215 455 aaPredicted RBP18.1■□□□□ 0.49
SCAMP4-211ENST00000588907 BACE2Q9Y5Z0 518 aa18.1■□□□□ 0.49
SCAMP4-211ENST00000588907 LAMA3Q16787 3333 aa18.1■□□□□ 0.49
SCAMP4-211ENST00000588907 AKR1B15C9JRZ8 316 aaPredicted RBP18.09■□□□□ 0.49
SCAMP4-211ENST00000588907 MFAP3LO75121 409 aa18.09■□□□□ 0.49
SCAMP4-211ENST00000588907 CTSAP10619 480 aa18.09■□□□□ 0.49
SCAMP4-211ENST00000588907 FERP16591 822 aa18.09■□□□□ 0.49
SCAMP4-211ENST00000588907 IGFBP6P24592 240 aaPredicted RBP18.09■□□□□ 0.49
SCAMP4-211ENST00000588907 CASP14P31944 242 aa18.09■□□□□ 0.49
SCAMP4-211ENST00000588907 RAP1GAPP47736 663 aa18.09■□□□□ 0.49
SCAMP4-211ENST00000588907 NDST1P52848 882 aa18.09■□□□□ 0.49
SCAMP4-211ENST00000588907 CDH8P55286 799 aa18.09■□□□□ 0.49
SCAMP4-211ENST00000588907 STILQ15468 1287 aa18.09■□□□□ 0.49
SCAMP4-211ENST00000588907 PTPN21Q16825 1174 aa18.09■□□□□ 0.49
SCAMP4-211ENST00000588907 KAT5Q92993 513 aa18.09■□□□□ 0.49
SCAMP4-211ENST00000588907 TMEM176AQ96HP8 235 aa18.09■□□□□ 0.49
SCAMP4-211ENST00000588907 ZBP1Q9H171 429 aa18.09■□□□□ 0.49
SCAMP4-211ENST00000588907 SDCBP2Q9H190 292 aa18.09■□□□□ 0.49
SCAMP4-211ENST00000588907 TLR9Q9NR96 1032 aa18.09■□□□□ 0.49
SCAMP4-211ENST00000588907 ZNHIT6Q9NWK9 470 aaKnown RBP18.09■□□□□ 0.49
SCAMP4-211ENST00000588907 BZW2Q9Y6E2 419 aaKnown RBP18.09■□□□□ 0.49
SCAMP4-211ENST00000588907 VWA8A3KMH1 1905 aa18.08■□□□□ 0.49
SCAMP4-211ENST00000588907 LPXNO60711 386 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms